LLPS-Icp-2050
ddx58
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Retinoic acid-inducible protein I |
| Gene Name: | ddx58 |
| Ensembl Gene: | ENSIPUG00000003114.1 |
| Ensembl Protein: | ENSIPUP00000004513.1 |
| Organism: | Ictalurus punctatus |
| Taxa ID: | 7998 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSIPUT00000004716.1 | ENSIPUP00000004513.1 |
| UniProt | J9Y049, J9Y049_ICTPU | |
| GeneBank | JQ008940 | AFS34609.1 |
| RefSeq | , NM_001278806.1 | , NP_001265735.1, NP_001265735.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MYELEKESLR LYSHYIVHFL RPSYIRGFLT TYLEEEYVEK IISKERLSQT EAAQMLLDKM 60 61 LDLKEVGWFQ GFLDTLRASE YTGLYTAIST WDFRDLETLD PHRKLLDQVE MSITKNMKPR 120 121 ELLPYMSDCL TQRECEEIRA VMCVCVCVTD ENGNCVQVCE ENDVVMATVC FKYREDGESD 180 181 NLMSNSETSV PEQCVEGTEG GVASVCERHT EKKLRKYQKE LATAAYNGLN TIICAPTGCG 240 241 KTIVAVDICE HHLKKYPQKA KVVFMATKVE VYEQQYKLFK EHFSKDPDIR VKGVCGDMSD 300 301 VSLPTLVSNN DVLLMTPQIL VNALQRGDVE SLNTFTLLLL DECHNTTGKH PYNNIMSLYI 360 361 DTKHTTHTHS LPQVVGFTAS VGIGSFKNVP EAENNICQLC ANLDARVITT VTENIDELRS 420 421 FVHTPEKDFF EVRPRTSEDP FISIIKSIMN NIEQLALSVY KIDTVSQVQK GDYGSQMYEQ 480 481 WIVDVQKRCR LLQFTDPEEE RRVCRALYTY TEHLRKYNDA LIINEDARTK DALDFMDSFI 540 541 TDISNASSDP TEHHLIDLYH AQRERLLQVA AEEKQNPKLE ELQFILDEEY GNNVQTRTVL 600 601 FVRTRALADA LKKWIEETES LKFLKPGVLI GRGRKSQLTG SGMTLTGQKG VLDSFKSSNE 660 661 SKILIATSVA DEGIDIPQCN LVLMYEYVGN VVTMVQVRGR GRAQGSRCFL ISSRQERIDK 720 721 EKLNMEREKL VQAAVKDLQT SPDRLCAKVD RFQKEDVARR AYVNMSVEKT LTEGSYELKC 780 781 GKCKKFVCFS DDLRVLQASH HIVLDCSIFQ RCLTKPHNKI KTFDNFTKKE KMFCSECNND 840 841 WGIVASYMNI QNLPVLKIES FTVEDRVTKK LQLFKKWRDV TFRIREFDMT ETTRELRT 898 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTACGAGT TGGAGAAGGA GTCGTTGCGG CTCTACAGTC ACTACATCGT CCATTTTTTA 60 61 CGACCCTCTT ACATCCGGGG ATTTCTGACA ACATACCTGG AGGAAGAGTA TGTTGAGAAG 120 121 ATCATATCAA AGGAAAGGTT GTCACAGACA GAGGCAGCTC AGATGCTGCT GGACAAGATG 180 181 TTGGACCTGA AGGAGGTCGG CTGGTTCCAG GGCTTCCTGG ATACGCTGCG GGCTTCAGAG 240 241 TACACAGGTC TCTACACGGC GATCAGTACG TGGGATTTTC GTGATCTTGA AACTCTGGAT 300 301 CCTCACAGGA AACTGCTGGA TCAAGTTGAA ATGTCTATCA CCAAAAATAT GAAACCCAGA 360 361 GAGCTGCTGC CATATATGAG CGACTGTCTC ACACAGCGAG AGTGTGAGGA GATCAGAGCA 420 421 GTGATGTGTG TGTGTGTGTG TGTTACAGAT GAGAATGGGA ATTGTGTTCA GGTCTGTGAG 480 481 GAGAATGATG TAGTCATGGC AACGGTATGT TTCAAGTACA GAGAGGACGG TGAGAGTGAC 540 541 AACCTGATGA GCAACAGTGA GACAAGTGTG CCTGAGCAGT GTGTTGAGGG GACAGAGGGG 600 601 GGTGTGGCCA GTGTGTGTGA GAGACATACA GAGAAGAAGT TGAGAAAGTA TCAGAAAGAG 660 661 CTTGCTACAG CCGCATACAA CGGCCTCAAC ACCATCATCT GTGCTCCAAC AGGTTGTGGC 720 721 AAAACTATCG TTGCCGTGGA CATCTGTGAA CATCACCTGA AGAAATATCC CCAGAAGGCC 780 781 AAAGTGGTTT TCATGGCAAC CAAAGTGGAG GTTTATGAAC AACAGTACAA ACTGTTCAAG 840 841 GAGCACTTCA GCAAGGACCC AGACATCAGG GTGAAAGGTG TGTGTGGGGA CATGTCAGAC 900 901 GTGTCTCTGC CCACCCTTGT GTCCAACAAT GACGTGTTGC TGATGACTCC TCAGATTCTG 960 961 GTGAACGCTC TGCAGCGTGG TGACGTGGAG TCTCTAAACA CCTTCACACT GCTGCTGCTG 1020 1021 GACGAGTGTC ACAACACCAC CGGCAAACAC CCATACAACA ACATCATGAG CCTCTACATC 1080 1081 GACACCAAAC ACACCACACA CACACATTCA CTGCCTCAGG TGGTGGGCTT CACTGCGTCT 1140 1141 GTTGGTATAG GGAGTTTTAA GAATGTGCCC GAGGCTGAGA ACAATATCTG CCAGCTGTGT 1200 1201 GCTAACTTGG ATGCCCGGGT CATCACCACG GTTACCGAGA ATATTGATGA GCTGAGGTCA 1260 1261 TTTGTGCACA CACCTGAGAA AGACTTTTTT GAGGTTCGTC CGCGCACCTC AGAAGACCCC 1320 1321 TTCATCTCCA TCATCAAAAG CATCATGAAT AACATCGAAC AGCTGGCTCT AAGTGTCTAC 1380 1381 AAAATTGACA CTGTGTCCCA GGTACAGAAG GGTGATTATG GCAGTCAGAT GTATGAGCAG 1440 1441 TGGATTGTGG ATGTACAGAA ACGCTGCAGA CTGCTACAGT TCACTGACCC TGAGGAGGAG 1500 1501 CGCAGAGTCT GCAGAGCACT GTACACCTAC ACTGAACATC TCAGAAAATA TAACGACGCT 1560 1561 CTGATCATTA ACGAGGACGC TCGCACTAAA GACGCACTGG ACTTCATGGA CTCGTTCATC 1620 1621 ACAGACATCA GTAACGCCTC TTCAGACCCC ACCGAGCACC ATCTCATTGA CTTATACCAC 1680 1681 GCTCAGCGTG AGCGGCTGCT CCAGGTAGCC GCTGAAGAAA AACAAAACCC CAAATTGGAG 1740 1741 GAACTCCAGT TCATCCTGGA TGAAGAATAC GGCAACAACG TGCAGACTCG CACCGTGCTG 1800 1801 TTCGTCAGGA CCCGTGCCCT CGCTGATGCT CTGAAAAAGT GGATAGAGGA GACAGAGTCA 1860 1861 CTGAAGTTTC TGAAGCCTGG AGTTCTGATT GGAAGAGGAA GAAAATCACA ACTGACAGGC 1920 1921 TCAGGCATGA CTCTGACAGG ACAGAAAGGT GTGCTTGACT CCTTTAAGAG CTCTAATGAG 1980 1981 AGTAAGATTC TCATTGCCAC CTCCGTCGCT GACGAGGGCA TCGATATCCC ACAATGCAAC 2040 2041 CTGGTGCTCA TGTATGAGTA CGTTGGCAAC GTCGTCACGA TGGTGCAGGT TCGAGGTCGG 2100 2101 GGCAGAGCTC AGGGCAGCAG GTGTTTTCTG ATCTCCAGCA GGCAGGAGCG CATTGATAAA 2160 2161 GAGAAATTGA ACATGGAGAG AGAGAAGCTG GTGCAGGCGG CTGTTAAAGA CCTGCAGACC 2220 2221 TCACCTGACC GCCTGTGTGC CAAGGTGGAC CGGTTCCAGA AGGAGGATGT GGCCCGGAGA 2280 2281 GCCTACGTGA ACATGAGTGT AGAGAAAACT CTGACTGAGG GAAGTTACGA ACTCAAGTGT 2340 2341 GGAAAGTGCA AGAAGTTTGT CTGTTTTAGT GATGACCTGC GTGTGCTACA GGCATCTCAC 2400 2401 CACATCGTGC TGGATTGCTC CATATTCCAG CGCTGTCTCA CCAAACCTCA CAATAAAATC 2460 2461 AAGACCTTCG ACAACTTCAC CAAAAAGGAA AAGATGTTTT GTTCTGAATG TAATAATGAC 2520 2521 TGGGGCATCG TCGCCTCCTA CATGAACATT CAGAATTTGC CGGTGTTGAA GATTGAAAGT 2580 2581 TTCACCGTTG AGGACAGAGT CACAAAGAAA CTGCAGCTTT TCAAGAAGTG GCGCGACGTC 2640 2641 ACGTTCCGTA TACGAGAGTT TGACATGACA GAGACGACGA GGGAGCTGAG AACCTAG 2697 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Asm-0834 | Astyanax mexicanus | 64.22 | 0.0 | 1202 |
| LLPS-Leo-1524 | Lepisosteus oculatus | 55.89 | 0.0 | 1037 |
| LLPS-Scf-2686 | Scleropages formosus | 52.09 | 0.0 | 963 |
| LLPS-Fud-3346 | Fukomys damarensis | 48.48 | 1e-159 | 485 |
| LLPS-Lac-0434 | Latimeria chalumnae | 48.24 | 0.0 | 811 |
| LLPS-Maf-0793 | Macaca fascicularis | 47.44 | 0.0 | 653 |
| LLPS-Ora-1434 | Ornithorhynchus anatinus | 46.69 | 0.0 | 632 |
| LLPS-Pes-3612 | Pelodiscus sinensis | 44.82 | 0.0 | 785 |
| LLPS-Anp-0658 | Anas platyrhynchos | 44.59 | 0.0 | 728 |
| LLPS-Tut-0734 | Tursiops truncatus | 44.02 | 0.0 | 566 |
| LLPS-Nol-3704 | Nomascus leucogenys | 44.02 | 6e-157 | 480 |
| LLPS-Fia-2226 | Ficedula albicollis | 43.99 | 0.0 | 728 |
| LLPS-Aim-0806 | Ailuropoda melanoleuca | 43.97 | 0.0 | 753 |
| LLPS-Mum-4034 | Mus musculus | 43.81 | 0.0 | 726 |
| LLPS-Poa-0512 | Pongo abelii | 43.67 | 0.0 | 704 |
| LLPS-Urm-0161 | Ursus maritimus | 43.66 | 0.0 | 743 |
| LLPS-Loa-4177 | Loxodonta africana | 43.66 | 0.0 | 753 |
| LLPS-Mup-3632 | Mustela putorius furo | 43.57 | 0.0 | 675 |
| LLPS-Xet-0959 | Xenopus tropicalis | 43.38 | 0.0 | 751 |
| LLPS-Bot-4323 | Bos taurus | 43.35 | 0.0 | 743 |
| LLPS-Mal-0955 | Mandrillus leucophaeus | 43.26 | 0.0 | 741 |
| LLPS-Paa-3348 | Papio anubis | 43.16 | 0.0 | 737 |
| LLPS-Chs-1582 | Chlorocebus sabaeus | 43.16 | 0.0 | 731 |
| LLPS-Cea-3200 | Cercocebus atys | 43.16 | 0.0 | 735 |
| LLPS-Fec-4391 | Felis catus | 43.13 | 0.0 | 744 |
| LLPS-Caf-3320 | Canis familiaris | 42.99 | 0.0 | 738 |
| LLPS-Mam-2565 | Macaca mulatta | 42.95 | 0.0 | 732 |
| LLPS-Man-0793 | Macaca nemestrina | 42.95 | 0.0 | 733 |
| LLPS-Eqc-0856 | Equus caballus | 42.92 | 0.0 | 728 |
| LLPS-Pat-1494 | Pan troglodytes | 42.89 | 0.0 | 724 |
| LLPS-Hos-2339 | Homo sapiens | 42.89 | 0.0 | 724 |
| LLPS-Tag-2012 | Taeniopygia guttata | 42.81 | 0.0 | 723 |
| LLPS-Cap-4124 | Cavia porcellus | 42.69 | 0.0 | 702 |
| LLPS-Orc-0658 | Oryctolagus cuniculus | 42.63 | 0.0 | 719 |
| LLPS-Cas-3005 | Carlito syrichta | 42.61 | 0.0 | 739 |
| LLPS-Rhb-3954 | Rhinopithecus bieti | 42.57 | 0.0 | 720 |
| LLPS-Myl-3993 | Myotis lucifugus | 42.54 | 0.0 | 735 |
| LLPS-Gog-3271 | Gorilla gorilla | 42.53 | 0.0 | 727 |
| LLPS-Caj-2968 | Callithrix jacchus | 42.53 | 0.0 | 728 |
| LLPS-Pap-3092 | Pan paniscus | 42.32 | 0.0 | 723 |
| LLPS-Aon-2957 | Aotus nancymaae | 42.26 | 0.0 | 697 |
| LLPS-Ova-3817 | Ovis aries | 42.16 | 0.0 | 729 |
| LLPS-Ict-2420 | Ictidomys tridecemlineatus | 42.04 | 0.0 | 675 |
| LLPS-Sus-1193 | Sus scrofa | 41.93 | 0.0 | 694 |
| LLPS-Mea-4530 | Mesocricetus auratus | 41.79 | 0.0 | 673 |
| LLPS-Dio-4079 | Dipodomys ordii | 41.45 | 0.0 | 694 |
| LLPS-Otg-1779 | Otolemur garnettii | 41.31 | 0.0 | 679 |
| LLPS-Ran-2076 | Rattus norvegicus | 41.11 | 6e-140 | 436 |
| LLPS-Anc-3345 | Anolis carolinensis | 39.19 | 0.0 | 629 |
| LLPS-Thc-1909 | Theobroma cacao | 34.2 | 2e-18 | 95.1 |
| LLPS-Brn-2495 | Brassica napus | 34.04 | 2e-17 | 91.7 |
| LLPS-Dac-1582 | Daucus carota | 33.64 | 2e-17 | 92.4 |
| LLPS-Gaga-1717 | Gallus gallus | 33.62 | 5e-103 | 341 |
| LLPS-Meg-0664 | Meleagris gallopavo | 33.55 | 1e-79 | 275 |
| LLPS-Ten-0348 | Tetraodon nigroviridis | 32.96 | 2e-92 | 313 |
| LLPS-Dar-2331 | Danio rerio | 32.86 | 1e-94 | 319 |
| LLPS-Phv-2100 | Phaseolus vulgaris | 32.6 | 1e-17 | 92.4 |
| LLPS-Sah-3514 | Sarcophilus harrisii | 32.32 | 3e-93 | 315 |
| LLPS-Tar-0072 | Takifugu rubripes | 31.96 | 1e-85 | 294 |
| LLPS-Scm-1972 | Scophthalmus maximus | 31.88 | 2e-86 | 297 |
| LLPS-Gaa-1741 | Gasterosteus aculeatus | 31.75 | 2e-83 | 289 |
| LLPS-Xim-0637 | Xiphophorus maculatus | 31.72 | 4e-84 | 290 |
| LLPS-Mod-0776 | Monodelphis domestica | 31.51 | 1e-89 | 306 |
| LLPS-Cii-1278 | Ciona intestinalis | 31.42 | 8e-85 | 292 |
| LLPS-Via-1474 | Vigna angularis | 30.59 | 8e-18 | 93.6 |
| LLPS-Met-0661 | Medicago truncatula | 27.53 | 8e-28 | 125 |
| LLPS-Hov-1529 | Hordeum vulgare | 27.49 | 1e-29 | 132 |
| LLPS-Arl-0675 | Arabidopsis lyrata | 27.43 | 6e-28 | 126 |
| LLPS-Sob-0158 | Sorghum bicolor | 27.31 | 1e-30 | 134 |
| LLPS-Tra-2126 | Triticum aestivum | 27.1 | 1e-29 | 131 |
| LLPS-Brd-1618 | Brachypodium distachyon | 27.05 | 2e-30 | 134 |
| LLPS-Mae-2108 | Manihot esculenta | 27.03 | 2e-27 | 124 |
| LLPS-Coc-1610 | Corchorus capsularis | 27.01 | 3e-27 | 124 |
| LLPS-Brr-0580 | Brassica rapa | 26.96 | 5e-25 | 116 |
| LLPS-Bro-2301 | Brassica oleracea | 26.94 | 3e-24 | 114 |
| LLPS-Asc-0099 | Aspergillus clavatus | 26.93 | 2e-22 | 108 |
| LLPS-Scp-0101 | Schizosaccharomyces pombe | 26.84 | 1e-29 | 131 |
| LLPS-Cae-1093 | Caenorhabditis elegans | 26.83 | 1e-58 | 221 |
| LLPS-Gag-1261 | Gaeumannomyces graminis | 26.77 | 4e-25 | 117 |
| LLPS-Sei-0339 | Setaria italica | 26.65 | 3e-31 | 137 |
| LLPS-Nia-0174 | Nicotiana attenuata | 26.64 | 8e-28 | 125 |
| LLPS-Pug-0229 | Puccinia graminis | 26.56 | 9e-22 | 106 |
| LLPS-Sot-1060 | Solanum tuberosum | 26.43 | 4e-29 | 130 |
| LLPS-Sol-0091 | Solanum lycopersicum | 26.43 | 5e-29 | 129 |
| LLPS-Pot-0582 | Populus trichocarpa | 26.41 | 3e-27 | 124 |
| LLPS-Amt-1055 | Amborella trichopoda | 26.35 | 1e-27 | 125 |
| LLPS-Cus-0978 | Cucumis sativus | 26.15 | 1e-27 | 125 |
| LLPS-Orgl-0596 | Oryza glumaepatula | 25.98 | 1e-25 | 119 |
| LLPS-Ori-1989 | Oryza indica | 25.98 | 9e-26 | 119 |
| LLPS-Orni-0583 | Oryza nivara | 25.98 | 1e-25 | 119 |
| LLPS-Orm-0755 | Oryza meridionalis | 25.98 | 2e-25 | 118 |
| LLPS-Org-1819 | Oryza glaberrima | 25.98 | 8e-26 | 119 |
| LLPS-Ors-1283 | Oryza sativa | 25.98 | 4e-26 | 120 |
| LLPS-Cog-1133 | Colletotrichum gloeosporioides | 25.86 | 1e-26 | 122 |
| LLPS-Nef-0084 | Neosartorya fischeri | 25.86 | 8e-23 | 109 |
| LLPS-Orp-1592 | Oryza punctata | 25.82 | 1e-22 | 108 |
| LLPS-Orb-0705 | Oryza barthii | 25.75 | 8e-25 | 116 |
| LLPS-Orr-0079 | Oryza rufipogon | 25.75 | 2e-24 | 115 |
| LLPS-Lep-0703 | Leersia perrieri | 25.68 | 5e-25 | 116 |
| LLPS-Scc-0110 | Schizosaccharomyces cryophilus | 25.64 | 8e-29 | 129 |
| LLPS-Lem-0974 | Leptosphaeria maculans | 25.61 | 2e-19 | 98.2 |
| LLPS-Abg-0025 | Absidia glauca | 25.58 | 6e-25 | 116 |
| LLPS-Fuv-1532 | Fusarium verticillioides | 25.35 | 1e-19 | 99.4 |
| LLPS-Fuo-0647 | Fusarium oxysporum | 25.19 | 9e-19 | 96.3 |
| LLPS-Pytr-0219 | Pyrenophora triticirepentis | 25.0 | 1e-18 | 95.9 |
| LLPS-Asfu-1300 | Aspergillus fumigatus | 25.0 | 2e-19 | 99.0 |
| LLPS-Scj-0386 | Schizosaccharomyces japonicus | 24.9 | 8e-23 | 109 |
| LLPS-Dos-1240 | Dothistroma septosporum | 24.66 | 3e-17 | 91.3 |
| LLPS-Scs-0010 | Sclerotinia sclerotiorum | 24.44 | 3e-19 | 98.2 |
| LLPS-Pyt-0688 | Pyrenophora teres | 24.32 | 2e-19 | 98.6 |
| LLPS-Fus-0661 | Fusarium solani | 24.2 | 3e-19 | 97.8 |
| LLPS-Beb-0520 | Beauveria bassiana | 24.17 | 5e-17 | 90.5 |
| LLPS-Tum-0169 | Tuber melanosporum | 23.92 | 9e-21 | 102 |
| LLPS-Miv-0134 | Microbotryum violaceum | 23.82 | 1e-19 | 99.4 |
| LLPS-Put-0586 | Puccinia triticina | 22.43 | 6e-17 | 90.5 |