LLPS-Hos-0278
CHCHD3
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | MICOS complex subunit MIC19; Coiled-coil-helix-coiled-coil-helix domain-containing protein 3 |
Gene Name: | CHCHD3, MIC19, MINOS3 |
Ensembl Gene: | ENSG00000106554.12 |
Ensembl Protein: | ENSP00000493081.1 |
Organism: | Homo sapiens |
Taxa ID: | 9606 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Stress granule | "...By adding known stress granule components not identified by mass spectrometry to this list, we created the first stress granule proteome for a mammalian cell." | U2OS cells | 26777405 |
Postsynaptic density | "...We report the first direct comparison of the proteome of triplicate isolates of mouse and human cortical postsynaptic densities. The mouse postsynaptic density comprised 1556 proteins and the human one 1461." | Human cortex | 23071613 |
▼ FUNCTION
Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. Has also been shown to function as a transcription factor which binds to the BAG1 promoter and represses BAG1 transcription. Plays an important role in the maintenance of the MICOS complex stability and the mitochondrial cristae morphology (PubMed:25781180). |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENST00000481152.2 | ENSP00000493081.1 |
Ensembl | ENST00000423635.5 | ENSP00000410425.1 |
Ensembl | ENST00000262570.9 | ENSP00000262570.5 |
Ensembl | ENST00000448878.6 | ENSP00000389297.2 |
UniProt | Q9NX63, MIC19_HUMAN | |
GeneBank | BC014839, BC011596, AK000427 | BAA91157.1, AAH14839.1, AAH11596.1 |
RefSeq | NM_001317177.1, NM_017812.3 | NP_001304106.1, NP_060282.1 |
Entrez | 54927 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGGTTSTRRV TFEADENENI TVVKGIRLSE NVIDRMKESS PSGSKSQRYS GAYGASVSDE 60 61 ELKRRVAEEL ALEQAKKESE DQKREETSET ALRKFCVQSF SSNFLESQNM YTLLLKQAKE 120 121 LDRERAAANE QLTRAILRER ICSEEERAKA KHLARQLEEK DRVLKKQDAF YKEQLARLEE 180 181 RSSEFYRVTT EQYQKAAEEV EAKFKFGEMK YHKTGLFILL PLVPVWLLVG ELVTSPSFQA 240 241 T 241 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGTGGGA CCACCAGCAC CCGCCGGGTC ACCTTCGAGG CGGACGAGAA TGAGAACATC 60 61 ACCGTGGTGA AGGGCATCCG GCTTTCGGAA AATGTGATTG ATCGAATGAA GGAATCCTCT 120 121 CCATCTGGTT CGAAGTCTCA GCGGTATTCT GGTGCTTATG GTGCCTCAGT TTCTGATGAA 180 181 GAATTGAAAA GAAGAGTAGC TGAGGAGCTG GCATTGGAGC AAGCCAAGAA AGAATCCGAA 240 241 GATCAGAAAC GACTAAAGCA AGCCAAAGAG CTGGACCGAG AGAGGGCTGC TGCCAATGAG 300 301 CAGTTAACCA GAGCCATCCT TCGGGAGAGG ATATGTAGCG AGGAGGAACG CGCTAAGGCA 360 361 AAGCACCTGG CTAGGCAGCT GGAAGAGAAA GACCGAGTGC TAAAGAAGCA GGATGCATTC 420 421 TACAAAGAAC AGCTGGCTAG ACTGGAGGAG AGGAGCTCAG AGTTCTACAG AGTCACCACT 480 481 GAACAATATC AGAAAGCTGC TGAAGAGGTG GAAGCAAAGT TCAAGCGATA TGAGTCTCAT 540 541 CCAGTCTGTG CTGATCTGCA GGCCAAAATT CTTCAGTGTT ACCGTGAGAA CACCCACCAG 600 601 ACCCTCAAAT GCTCCGCTCT GGCCACCCAG TATATGCACT GTGTCAATCA TGCCAAACAG 660 661 AGCATGCTTG AGAAGGGAGG ATAA 684 |
▼ KEYWORD
ID | Family |
Acetylation | |
Complete proteome | |
Cytoplasm | |
Disulfide bond | |
Lipoprotein | |
Membrane | |
Mitochondrion | |
Mitochondrion inner membrane | |
Myristate | |
Nucleus | |
Phosphoprotein | |
Reference proteome | |
Repressor | |
Transcription | |
Transcription regulation
|
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Extracellular exosome | |
Cellular Component | MICOS complex | |
Cellular Component | Mitochondrial inner membrane | |
Cellular Component | Mitochondrion | |
Cellular Component | Nucleus | |
Molecular Function | DNA-binding transcription repressor activity, RNA polymerase II-specific | |
Molecular Function | Molecular adaptor activity | |
Molecular Function | Phosphatase binding | |
Biological Process | Cristae formation | |
Biological Process | Inner mitochondrial membrane organization | |
Biological Process | Mitochondrial fusion | |
Biological Process | Negative regulation of transcription by RNA polymerase II |
▼ ANNOTATION
Drug | ||||
CTD |
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
CORUM | CellMarker | RaftProt |
Localization | ||||
COMPARTMENTS | NLSdb |
Methylation | ||||
TCGA | ICGC | MethyCancer |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Pap-2096 | Pan paniscus | 99.17 | 3e-142 | 405 |
LLPS-Pat-3402 | Pan troglodytes | 98.76 | 1e-140 | 401 |
LLPS-Gog-2894 | Gorilla gorilla | 98.34 | 1e-140 | 401 |
LLPS-Cea-4371 | Cercocebus atys | 97.1 | 2e-139 | 398 |
LLPS-Maf-1276 | Macaca fascicularis | 96.69 | 3e-137 | 393 |
LLPS-Man-2563 | Macaca nemestrina | 96.69 | 3e-137 | 393 |
LLPS-Mam-1888 | Macaca mulatta | 96.69 | 3e-137 | 393 |
LLPS-Cas-0020 | Carlito syrichta | 95.45 | 3e-37 | 132 |
LLPS-Paa-3778 | Papio anubis | 93.36 | 5e-138 | 394 |
LLPS-Poa-4308 | Pongo abelii | 84.88 | 4e-99 | 295 |
LLPS-Aon-0134 | Aotus nancymaae | 82.93 | 2e-96 | 289 |
LLPS-Mal-2694 | Mandrillus leucophaeus | 82.38 | 3e-96 | 288 |
LLPS-Meg-1944 | Meleagris gallopavo | 81.82 | 4e-16 | 74.7 |
LLPS-Nol-0916 | Nomascus leucogenys | 78.77 | 1e-88 | 269 |
LLPS-Eqc-1718 | Equus caballus | 78.64 | 1e-89 | 274 |
LLPS-Chs-2092 | Chlorocebus sabaeus | 78.54 | 5e-90 | 272 |
LLPS-Fud-1458 | Fukomys damarensis | 78.3 | 1e-92 | 278 |
LLPS-Myl-3914 | Myotis lucifugus | 78.05 | 1e-90 | 273 |
LLPS-Caf-0513 | Canis familiaris | 78.05 | 4e-90 | 272 |
LLPS-Rhb-1956 | Rhinopithecus bieti | 77.83 | 4e-87 | 265 |
LLPS-Orc-2448 | Oryctolagus cuniculus | 77.83 | 4e-91 | 275 |
LLPS-Mea-4150 | Mesocricetus auratus | 77.56 | 7e-83 | 254 |
LLPS-Icp-3878 | Ictalurus punctatus | 77.5 | 4e-14 | 74.3 |
LLPS-Tar-0038 | Takifugu rubripes | 77.5 | 3e-13 | 72.8 |
LLPS-Orn-0959 | Oreochromis niloticus | 77.5 | 4e-13 | 71.2 |
LLPS-Bot-1393 | Bos taurus | 77.36 | 7e-91 | 274 |
LLPS-Cap-0623 | Cavia porcellus | 77.36 | 2e-91 | 276 |
LLPS-Loa-2432 | Loxodonta africana | 77.07 | 3e-86 | 262 |
LLPS-Caj-3282 | Callithrix jacchus | 76.89 | 5e-86 | 262 |
LLPS-Mup-1196 | Mustela putorius furo | 76.59 | 1e-84 | 258 |
LLPS-Mum-0267 | Mus musculus | 76.42 | 5e-90 | 272 |
LLPS-Urm-0199 | Ursus maritimus | 76.1 | 1e-84 | 258 |
LLPS-Ere-0874 | Erinaceus europaeus | 75.61 | 3e-81 | 249 |
LLPS-Fec-2251 | Felis catus | 75.47 | 4e-84 | 257 |
LLPS-Aim-2511 | Ailuropoda melanoleuca | 75.12 | 8e-83 | 253 |
LLPS-Asm-2605 | Astyanax mexicanus | 75.0 | 5e-13 | 71.6 |
LLPS-Orl-0006 | Oryzias latipes | 75.0 | 6e-13 | 71.6 |
LLPS-Dar-2130 | Danio rerio | 74.42 | 5e-13 | 70.9 |
LLPS-Dio-0591 | Dipodomys ordii | 72.64 | 6e-85 | 259 |
LLPS-Ict-2345 | Ictidomys tridecemlineatus | 72.6 | 3e-81 | 250 |
LLPS-Ran-0929 | Rattus norvegicus | 72.17 | 4e-85 | 259 |
LLPS-Sus-0004 | Sus scrofa | 71.89 | 3e-78 | 242 |
LLPS-Ova-1074 | Ovis aries | 69.64 | 1e-76 | 238 |
LLPS-Gaa-3601 | Gasterosteus aculeatus | 68.75 | 3e-13 | 71.6 |
LLPS-Lac-1632 | Latimeria chalumnae | 67.06 | 3e-29 | 112 |
LLPS-Scm-1870 | Scophthalmus maximus | 66.67 | 6e-13 | 71.6 |
LLPS-Pof-0686 | Poecilia formosa | 64.29 | 5e-14 | 73.9 |
LLPS-Ora-1344 | Ornithorhynchus anatinus | 64.08 | 6e-63 | 203 |
LLPS-Mod-0796 | Monodelphis domestica | 63.41 | 4e-68 | 216 |
LLPS-Gaga-0323 | Gallus gallus | 61.84 | 8e-61 | 197 |
LLPS-Tag-2360 | Taeniopygia guttata | 61.17 | 5e-62 | 199 |
LLPS-Sah-0279 | Sarcophilus harrisii | 59.91 | 2e-63 | 204 |
LLPS-Fia-1272 | Ficedula albicollis | 59.51 | 1e-57 | 190 |
LLPS-Pes-1156 | Pelodiscus sinensis | 58.49 | 6e-59 | 193 |
LLPS-Anp-1406 | Anas platyrhynchos | 58.1 | 7e-43 | 149 |
LLPS-Anc-2094 | Anolis carolinensis | 58.1 | 1e-57 | 189 |
LLPS-Xim-2020 | Xiphophorus maculatus | 57.3 | 4e-23 | 100 |
LLPS-Leo-3348 | Lepisosteus oculatus | 52.36 | 1e-50 | 172 |
LLPS-Xet-2602 | Xenopus tropicalis | 52.07 | 9e-50 | 169 |
LLPS-Scf-0953 | Scleropages formosus | 38.78 | 3e-36 | 135 |
LLPS-Ten-1911 | Tetraodon nigroviridis | 26.79 | 4e-06 | 50.8 |