LLPS-Eqc-4285
GDPD1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Glycerophosphodiester phosphodiesterase domain containing 1 |
Gene Name: | GDPD1 |
Ensembl Gene: | ENSECAG00000015552.2 |
Ensembl Protein: | ENSECAP00000013322.1 |
Organism: | Equus caballus |
Taxa ID: | 9796 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSECAT00000016495.2 | ENSECAP00000013322.1 |
UniProt | F6U0M2, F6U0M2_HORSE | |
RefSeq | XM_005597526.2 | XP_005597583.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSSTAAFYLL STLGGYLVTS FLLLKYPTLL HQRKKQRFLS KHISHRGGAG ENLENTMAAF 60 61 QHAVTIGTDM LELDCHITKD EQVVVSHDEN LKRSTGVNVN ISDLKYCELP PYLGKLDVAF 120 121 QKACQSEGKD NRIPLLKEVF EAFPNTPINI DIKVNNNVLI KKVSELVKLY RREQITVWGN 180 181 ASYEIVEKCY KENSDIPILF SLQRVLLILG LFFTGLLPFV PIREQFFEIP MPSIILKLRE 240 241 PHTMSRSQKF LIWLSDILLM RKALFDHLTA RGIQVYVWVL NEEQEYKRAF DLGATGVMTD 300 301 YPTKLKDFLH NISS 314 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCGTCCA CCGCGGCCTT TTACCTTCTC TCCACCCTCG GAGGGTACTT GGTGACCTCG 60 61 TTTTTGCTGC TCAAATATCC AACCTTGCTG CACCAGAGAA AGAAACAGCG ATTCCTCAGT 120 121 AAACACATCT CTCACCGCGG AGGTGCTGGA GAAAATTTGG AGAATACAAT GGCAGCCTTT 180 181 CAGCATGCAG TTACAATTGG AACTGATATG CTGGAATTGG ACTGCCATAT CACAAAGGAT 240 241 GAACAAGTTG TAGTGTCACA TGATGAGAAT CTGAAGAGAT CAACCGGGGT CAATGTAAAC 300 301 ATCTCTGATC TGAAGTACTG TGAACTCCCA CCTTACCTTG GCAAACTGGA TGTCGCGTTT 360 361 CAAAAAGCAT GCCAATCTGA AGGAAAAGAT AACCGAATTC CATTACTGAA GGAGGTTTTT 420 421 GAGGCCTTTC CTAACACTCC CATTAACATC GACATCAAAG TCAACAACAA TGTGCTGATT 480 481 AAGAAGGTCT CAGAGTTGGT GAAGCTGTAT AGACGAGAAC AGATAACAGT GTGGGGTAAT 540 541 GCCAGTTATG AAATTGTAGA AAAGTGCTAC AAAGAGAATT CAGACATTCC TATACTCTTC 600 601 AGTCTACAAC GTGTTCTGCT CATTCTTGGC CTGTTCTTCA CTGGCCTCTT GCCCTTTGTG 660 661 CCCATTCGAG AACAGTTTTT TGAGATCCCA ATGCCTTCTA TCATATTGAA ACTAAGAGAA 720 721 CCACACACCA TGTCCAGAAG TCAAAAGTTT CTCATCTGGC TTTCTGATAT TTTACTAATG 780 781 AGAAAGGCTT TGTTTGACCA CCTCACTGCC CGAGGCATTC AGGTGTATGT TTGGGTATTA 840 841 AATGAAGAAC AAGAATACAA AAGAGCTTTT GATTTGGGAG CAACTGGAGT GATGACAGAC 900 901 TATCCAACAA AGCTTAAGGA CTTTTTACAT AATATTTCAT CATAG 945 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sus-0547 | Sus scrofa | 97.12 | 0.0 | 608 |
LLPS-Fec-2694 | Felis catus | 96.82 | 0.0 | 605 |
LLPS-Aim-2594 | Ailuropoda melanoleuca | 96.5 | 0.0 | 604 |
LLPS-Urm-3920 | Ursus maritimus | 96.5 | 0.0 | 604 |
LLPS-Otg-3957 | Otolemur garnettii | 96.5 | 0.0 | 583 |
LLPS-Cas-1427 | Carlito syrichta | 96.18 | 0.0 | 604 |
LLPS-Caf-4102 | Canis familiaris | 95.86 | 0.0 | 601 |
LLPS-Maf-3690 | Macaca fascicularis | 95.54 | 0.0 | 601 |
LLPS-Cea-1321 | Cercocebus atys | 95.54 | 0.0 | 601 |
LLPS-Paa-4571 | Papio anubis | 95.54 | 0.0 | 601 |
LLPS-Man-0826 | Macaca nemestrina | 95.54 | 0.0 | 601 |
LLPS-Mam-2425 | Macaca mulatta | 95.54 | 0.0 | 601 |
LLPS-Ict-3823 | Ictidomys tridecemlineatus | 95.54 | 0.0 | 598 |
LLPS-Chs-2718 | Chlorocebus sabaeus | 95.22 | 0.0 | 599 |
LLPS-Gog-2456 | Gorilla gorilla | 94.9 | 0.0 | 598 |
LLPS-Caj-3444 | Callithrix jacchus | 94.9 | 0.0 | 599 |
LLPS-Pat-2218 | Pan troglodytes | 94.9 | 0.0 | 598 |
LLPS-Hos-4904 | Homo sapiens | 94.9 | 0.0 | 598 |
LLPS-Poa-4003 | Pongo abelii | 94.59 | 0.0 | 598 |
LLPS-Orc-0099 | Oryctolagus cuniculus | 93.31 | 0.0 | 587 |
LLPS-Cap-3793 | Cavia porcellus | 92.36 | 0.0 | 581 |
LLPS-Mum-4972 | Mus musculus | 90.76 | 0.0 | 567 |
LLPS-Mea-1609 | Mesocricetus auratus | 89.81 | 0.0 | 566 |
LLPS-Orn-0537 | Oreochromis niloticus | 72.22 | 1e-159 | 456 |
LLPS-Xim-4170 | Xiphophorus maculatus | 71.9 | 2e-158 | 452 |
LLPS-Pof-0842 | Poecilia formosa | 71.9 | 3e-158 | 452 |
LLPS-Asm-1097 | Astyanax mexicanus | 71.34 | 1e-157 | 450 |
LLPS-Orl-3542 | Oryzias latipes | 69.93 | 4e-156 | 449 |
LLPS-Lac-2252 | Latimeria chalumnae | 65.92 | 2e-148 | 427 |
LLPS-Pyt-0122 | Pyrenophora teres | 48.44 | 3e-10 | 65.5 |
LLPS-Cis-2010 | Ciona savignyi | 45.61 | 4e-07 | 54.7 |
LLPS-Scs-0448 | Sclerotinia sclerotiorum | 45.0 | 7e-09 | 57.0 |
LLPS-Cogr-0259 | Colletotrichum graminicola | 44.44 | 3e-09 | 61.6 |
LLPS-Usm-0483 | Ustilago maydis | 44.23 | 1e-06 | 53.1 |
LLPS-Gag-0488 | Gaeumannomyces graminis | 44.12 | 6e-11 | 66.6 |
LLPS-Cog-0091 | Colletotrichum gloeosporioides | 44.12 | 7e-09 | 60.5 |
LLPS-Scc-1026 | Schizosaccharomyces cryophilus | 43.75 | 2e-09 | 62.0 |
LLPS-Cii-0398 | Ciona intestinalis | 42.11 | 3e-06 | 52.4 |
LLPS-Zyt-1321 | Zymoseptoria tritici | 42.03 | 2e-08 | 58.2 |
LLPS-Fuv-1335 | Fusarium verticillioides | 41.89 | 2e-10 | 65.5 |
LLPS-Fuo-1369 | Fusarium oxysporum | 41.89 | 1e-10 | 65.9 |
LLPS-Mup-0059 | Mustela putorius furo | 41.75 | 2e-77 | 246 |
LLPS-Ova-2933 | Ovis aries | 41.58 | 4e-76 | 243 |
LLPS-Tut-0409 | Tursiops truncatus | 41.42 | 1e-77 | 246 |
LLPS-Bot-4326 | Bos taurus | 41.25 | 2e-75 | 241 |
LLPS-Map-1329 | Magnaporthe poae | 41.18 | 5e-10 | 63.9 |
LLPS-Fud-0431 | Fukomys damarensis | 40.97 | 8e-79 | 250 |
LLPS-Dos-1322 | Dothistroma septosporum | 37.5 | 2e-08 | 58.9 |
LLPS-Beb-0705 | Beauveria bassiana | 34.83 | 2e-09 | 61.6 |
LLPS-Tum-0163 | Tuber melanosporum | 34.71 | 9e-10 | 62.4 |
LLPS-Ran-4085 | Rattus norvegicus | 34.26 | 1e-08 | 58.9 |
LLPS-Kop-1098 | Komagataella pastoris | 31.03 | 4e-07 | 54.7 |
LLPS-Abg-1674 | Absidia glauca | 30.95 | 3e-08 | 58.2 |
LLPS-Spr-1453 | Sporisorium reilianum | 30.3 | 2e-07 | 55.8 |
LLPS-Mel-1030 | Melampsora laricipopulina | 30.25 | 2e-07 | 55.5 |
LLPS-Scj-0336 | Schizosaccharomyces japonicus | 29.8 | 1e-06 | 53.5 |
LLPS-Coo-1491 | Colletotrichum orbiculare | 27.72 | 1e-12 | 71.6 |
LLPS-Ved-1229 | Verticillium dahliae | 27.27 | 3e-14 | 76.3 |
LLPS-Asg-0893 | Ashbya gossypii | 27.21 | 2e-06 | 53.1 |
LLPS-Crn-0261 | Cryptococcus neoformans | 26.44 | 2e-06 | 53.1 |
LLPS-Nec-1265 | Neurospora crassa | 25.99 | 5e-13 | 72.8 |
LLPS-Lem-1115 | Leptosphaeria maculans | 25.93 | 1e-10 | 65.9 |
LLPS-Phn-0137 | Phaeosphaeria nodorum | 25.82 | 2e-11 | 68.6 |
LLPS-Scp-0797 | Schizosaccharomyces pombe | 25.65 | 3e-13 | 73.2 |
LLPS-Sac-0431 | Saccharomyces cerevisiae | 25.53 | 3e-08 | 58.2 |
LLPS-Cae-1460 | Caenorhabditis elegans | 22.57 | 1e-10 | 65.5 |