LLPS-Dar-1399
sec13

▼ OVERVIEW

Status: Unreviewed
Protein Name: SEC13 homolog, nuclear pore and COPII coat complex component
Gene Name: sec13
Ensembl Gene: ENSDARG00000109318.1
Ensembl Protein: ENSDARP00000154605.1
Organism: Danio rerio
Taxa ID: 7955
LLPS Type: Client


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblENSDART00000191518.1ENSDARP00000154605.1
UniProtA0A2R8RKG2, A0A2R8RKG2_DANRE
GeneBankBX537350

▼ SEQUENCE

Protein Sequence (FASTA)
1     MNILKKLHFY  FKFMHIKVSV  INTVDTSHED  MIHDAQMDYY  GTRLATCSSD  RSVKIFDVKN  60
61    GGQILVADLR  GHEGPVWQVA  WAHPMYGNIL  ASCSYDRKVI  IWKEENSTWD  KMYEYTGHDS  120
121   SVNSVCWGPY  DFGLILACGS  SDGAISVLTC  SGDGHWDIKK  INNAHTIGCN  AVSWAPAVVP  180
181   GSLIEQPTGQ  KPNYIKRFVS  GGCDNLVKLW  KEEDGQWKED  QKLEAHSDWV  RDVGWAPSIG  240
241   LPTSTIASCS  QDGRVFIWTC  DDPAGNTWTA  KLLHKFNDVV  WHVSWSITGN  ILAVSGGDNK  300
301   VTLWKESVDG  QWACISDVNK  GQGAVSSITD  SQQSEQ  336
Nucleotide CDS Sequence (FASTA)
1     ATGAATATAT  TAAAAAAACT  TCACTTTTAC  TTTAAGTTCA  TGCACATTAA  AGTTTCGGTC  60
61    ATTAACACAG  TGGACACCTC  ACACGAGGAC  ATGATCCATG  ATGCTCAGAT  GGATTATTAT  120
121   GGCACCAGAC  TGGCCACCTG  CTCTTCGGAT  CGCTCTGTCA  AGATCTTCGA  CGTCAAGAAC  180
181   GGAGGACAGA  TCCTTGTGGC  CGATTTAAGA  GGTCATGAGG  GTCCGGTGTG  GCAGGTGGCC  240
241   TGGGCTCATC  CCATGTACGG  CAACATCCTG  GCGTCCTGCT  CCTACGACAG  GAAGGTGATC  300
301   ATCTGGAAAG  AGGAGAACAG  CACCTGGGAC  AAGATGTATG  AATACACAGG  CCACGACTCC  360
361   TCGGTCAATT  CGGTTTGCTG  GGGCCCATAC  GACTTTGGCC  TGATTCTGGC  CTGCGGTAGC  420
421   TCAGACGGGG  CCATCTCAGT  GTTAACCTGT  TCTGGAGACG  GACACTGGGA  TATTAAGAAG  480
481   ATCAACAATG  CACACACTAT  CGGCTGTAAT  GCAGTGAGTT  GGGCCCCAGC  TGTTGTCCCA  540
541   GGGAGTCTTA  TTGAGCAGCC  AACAGGACAG  AAGCCCAACT  ACATCAAGAG  ATTTGTGTCT  600
601   GGAGGCTGTG  ACAATCTGGT  CAAGCTGTGG  AAGGAAGAAG  ACGGCCAGTG  GAAAGAGGAC  660
661   CAGAAGCTGG  AGGCGCACAG  TGATTGGGTG  AGAGATGTTG  GATGGGCTCC  TTCTATTGGT  720
721   CTACCGACCA  GCACAATCGC  CAGCTGCTCG  CAGGATGGTC  GTGTGTTCAT  CTGGACATGT  780
781   GATGATCCTG  CTGGTAACAC  CTGGACAGCC  AAACTCCTCC  ACAAATTCAA  TGATGTGGTG  840
841   TGGCACGTGA  GCTGGTCCAT  CACTGGAAAC  ATCCTGGCTG  TGTCTGGAGG  AGACAACAAG  900
901   GTGACCCTGT  GGAAGGAGTC  AGTGGACGGA  CAGTGGGCTT  GCATTAGTGA  CGTCAACAAA  960
961   GGCCAGGGGG  CCGTGAGCTC  CATCACAGAC  AGCCAACAGA  GCGAGCAGTG  A  1011

▼ ANNOTATION

Disorder
IUPred2A
Domain
SMARTCDD
Physicochemical
AAindex

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Dar-1358Danio rerio100.00.0 653
LLPS-Icp-2364Ictalurus punctatus94.980.0 627
LLPS-Scf-1893Scleropages formosus94.980.0 624
LLPS-Tar-2712Takifugu rubripes94.370.0 565
LLPS-Asm-0167Astyanax mexicanus93.730.0 619
LLPS-Leo-0801Lepisosteus oculatus93.150.0 615
LLPS-Pof-0696Poecilia formosa93.10.0 621
LLPS-Xim-1527Xiphophorus maculatus93.10.0 622
LLPS-Scm-0467Scophthalmus maximus92.790.0 621
LLPS-Orl-1836Oryzias latipes92.480.0 621
LLPS-Orn-0791Oreochromis niloticus91.90.0 617
LLPS-Ten-1495Tetraodon nigroviridis91.90.0 614
LLPS-Lac-0978Latimeria chalumnae91.220.0 611
LLPS-Anc-2019Anolis carolinensis89.660.0 603
LLPS-Mod-0062Monodelphis domestica89.060.0 600
LLPS-Sah-1019Sarcophilus harrisii89.060.0 599
LLPS-Anp-0757Anas platyrhynchos88.820.0 572
LLPS-Meg-1358Meleagris gallopavo88.820.0 572
LLPS-Sus-3751Sus scrofa88.790.0 590
LLPS-Tag-0110Taeniopygia guttata88.750.0 600
LLPS-Xet-1489Xenopus tropicalis88.710.0 592
LLPS-Pes-0087Pelodiscus sinensis88.560.0 575
LLPS-Urm-1702Ursus maritimus88.470.0 591
LLPS-Caf-0867Canis familiaris88.470.0 591
LLPS-Ova-0625Ovis aries88.470.0 588
LLPS-Myl-0578Myotis lucifugus88.470.0 590
LLPS-Mup-1751Mustela putorius furo88.470.0 591
LLPS-Gaga-2486Gallus gallus88.440.0 609
LLPS-Eqc-0066Equus caballus88.310.0 566
LLPS-Fia-1274Ficedula albicollis88.240.0 573
LLPS-Fec-1932Felis catus88.160.0 588
LLPS-Bot-0315Bos taurus88.160.0 586
LLPS-Loa-1735Loxodonta africana87.850.0 585
LLPS-Fud-0670Fukomys damarensis87.850.0 584
LLPS-Aim-0586Ailuropoda melanoleuca87.850.0 587
LLPS-Ran-1697Rattus norvegicus87.850.0 587
LLPS-Mum-0875Mus musculus87.540.0 587
LLPS-Mea-1005Mesocricetus auratus87.540.0 587
LLPS-Rhb-1998Rhinopithecus bieti87.380.0 591
LLPS-Chs-1005Chlorocebus sabaeus87.380.0 591
LLPS-Cap-0749Cavia porcellus87.230.0 583
LLPS-Ora-1314Ornithorhynchus anatinus87.190.0 588
LLPS-Man-0112Macaca nemestrina87.080.0 589
LLPS-Pap-2344Pan paniscus87.080.0 588
LLPS-Pat-0951Pan troglodytes87.080.0 588
LLPS-Otg-0998Otolemur garnettii87.080.0 589
LLPS-Mam-1683Macaca mulatta87.080.0 589
LLPS-Poa-0234Pongo abelii87.080.0 587
LLPS-Cea-0363Cercocebus atys87.080.0 588
LLPS-Maf-1908Macaca fascicularis87.080.0 589
LLPS-Gog-3134Gorilla gorilla87.080.0 588
LLPS-Mal-0038Mandrillus leucophaeus87.080.0 589
LLPS-Paa-0279Papio anubis87.080.0 589
LLPS-Hos-0976Homo sapiens86.770.0 587
LLPS-Nol-2007Nomascus leucogenys86.770.0 588
LLPS-Aon-0591Aotus nancymaae86.770.0 588
LLPS-Cas-0802Carlito syrichta86.60.0 583
LLPS-Ict-0437Ictidomys tridecemlineatus86.070.0 581
LLPS-Orc-2586Oryctolagus cuniculus85.670.0 573
LLPS-Dio-0432Dipodomys ordii85.140.0 580
LLPS-Caj-0018Callithrix jacchus84.910.0 590
LLPS-Cii-1147Ciona intestinalis69.931e-162 464
LLPS-Cis-0646Ciona savignyi68.631e-157 451
LLPS-Drm-0606Drosophila melanogaster59.477e-127 375
LLPS-Abg-0021Absidia glauca57.144e-95 290
LLPS-Bro-1591Brassica oleracea56.572e-110 330
LLPS-Brn-1122Brassica napus56.573e-110 330
LLPS-Art-0235Arabidopsis thaliana56.528e-111 332
LLPS-Php-0038Physcomitrella patens56.292e-111 333
LLPS-Brr-0258Brassica rapa56.233e-110 330
LLPS-Arl-0630Arabidopsis lyrata55.851e-110 331
LLPS-Amt-0715Amborella trichopoda55.524e-113 338
LLPS-Sem-1393Selaginella moellendorffii55.522e-115 344
LLPS-Tra-2164Triticum aestivum55.487e-115 342
LLPS-Glm-2134Glycine max55.377e-112 334
LLPS-Coc-0568Corchorus capsularis55.034e-111 332
LLPS-Pot-1052Populus trichocarpa54.856e-112 335
LLPS-Mae-0803Manihot esculenta54.857e-112 334
LLPS-Tru-1064Triticum urartu54.828e-114 340
LLPS-Hov-0727Hordeum vulgare54.823e-113 338
LLPS-Thc-1759Theobroma cacao54.795e-109 327
LLPS-Prp-0892Prunus persica54.74e-108 325
LLPS-Met-0361Medicago truncatula54.71e-109 329
LLPS-Orbr-1994Oryza brachyantha54.671e-112 337
LLPS-Cus-1182Cucumis sativus54.365e-109 327
LLPS-Brd-0449Brachypodium distachyon54.331e-111 334
LLPS-Viv-0910Vitis vinifera54.183e-110 330
LLPS-Orp-0321Oryza punctata54.158e-112 334
LLPS-Ors-0581Oryza sativa54.158e-112 334
LLPS-Orm-1480Oryza meridionalis54.158e-112 334
LLPS-Orr-0591Oryza rufipogon54.158e-112 334
LLPS-Org-0014Oryza glaberrima54.158e-112 334
LLPS-Orb-1097Oryza barthii54.158e-112 334
LLPS-Ori-0394Oryza indica54.158e-112 334
LLPS-Mua-1820Musa acuminata54.159e-109 327
LLPS-Orni-1346Oryza nivara54.158e-112 334
LLPS-Orgl-0587Oryza glumaepatula54.158e-112 334
LLPS-Phv-0300Phaseolus vulgaris54.039e-109 327
LLPS-Hea-2064Helianthus annuus54.035e-106 319
LLPS-Via-1743Vigna angularis54.032e-108 326
LLPS-Zem-0746Zea mays54.05e-113 337
LLPS-Dac-0318Daucus carota54.07e-108 324
LLPS-Sob-0146Sorghum bicolor53.852e-112 336
LLPS-Sei-1480Setaria italica53.823e-112 335
LLPS-Gor-0229Gossypium raimondii53.697e-109 327
LLPS-Chr-0702Chlamydomonas reinhardtii53.641e-114 342
LLPS-Nia-2316Nicotiana attenuata53.491e-107 323
LLPS-Sot-0875Solanum tuberosum53.491e-106 321
LLPS-Sol-1321Solanum lycopersicum53.167e-106 319
LLPS-Lep-1908Leersia perrieri53.09e-110 331
LLPS-Gas-0885Galdieria sulphuraria52.728e-105 317
LLPS-Lem-0760Leptosphaeria maculans52.357e-97 296
LLPS-Asc-1277Aspergillus clavatus52.163e-97 296
LLPS-Osl-0370Ostreococcus lucimarinus52.051e-96 295
LLPS-Yal-0337Yarrowia lipolytica52.048e-97 296
LLPS-Asfu-0432Aspergillus fumigatus51.831e-96 296
LLPS-Ast-0311Aspergillus terreus51.792e-100 305
LLPS-Pug-0262Puccinia graminis51.71e-102 312
LLPS-Kop-0146Komagataella pastoris51.662e-100 305
LLPS-Cog-0483Colletotrichum gloeosporioides51.548e-100 303
LLPS-Cogr-0982Colletotrichum graminicola51.542e-99 302
LLPS-Ved-0991Verticillium dahliae51.542e-98 300
LLPS-Asf-0092Aspergillus flavus51.473e-99 302
LLPS-Nef-0022Neosartorya fischeri51.332e-78 247
LLPS-Aso-1170Aspergillus oryzae51.331e-95 292
LLPS-Mao-0729Magnaporthe oryzae51.035e-94 288
LLPS-Phn-1115Phaeosphaeria nodorum50.994e-95 291
LLPS-Put-0191Puccinia triticina50.943e-99 303
LLPS-Asni-0837Aspergillus niger50.818e-99 301
LLPS-Tum-0569Tuber melanosporum50.621e-105 322
LLPS-Asn-0490Aspergillus nidulans50.496e-99 301
LLPS-Coo-1116Colletotrichum orbiculare50.343e-92 284
LLPS-Pyt-0891Pyrenophora teres50.342e-92 285
LLPS-Blg-1001Blumeria graminis50.332e-98 300
LLPS-Beb-0987Beauveria bassiana50.02e-95 293
LLPS-Pytr-0510Pyrenophora triticirepentis50.06e-90 278
LLPS-Asg-0424Ashbya gossypii50.02e-97 297
LLPS-Fus-1108Fusarium solani49.845e-96 294
LLPS-Trv-0677Trichoderma virens49.839e-98 298
LLPS-Fuo-0898Fusarium oxysporum49.834e-97 297
LLPS-Fuv-1031Fusarium verticillioides49.834e-97 297
LLPS-Scp-0617Schizosaccharomyces pombe49.833e-99 302
LLPS-Usm-0181Ustilago maydis49.576e-109 329
LLPS-Sac-0978Saccharomyces cerevisiae49.53e-92 284
LLPS-Trr-0610Trichoderma reesei49.345e-97 296
LLPS-Nec-1057Neurospora crassa49.332e-97 297
LLPS-Spr-1197Sporisorium reilianum49.285e-107 324
LLPS-Gag-0790Gaeumannomyces graminis49.03e-93 286
LLPS-Mel-1130Melampsora laricipopulina48.645e-101 308
LLPS-Dos-0739Dothistroma septosporum48.521e-94 291
LLPS-Crn-0511Cryptococcus neoformans48.363e-97 298
LLPS-Scc-0959Schizosaccharomyces cryophilus48.184e-95 291
LLPS-Scj-1343Schizosaccharomyces japonicus48.013e-93 286
LLPS-Miv-0381Microbotryum violaceum46.481e-88 297
LLPS-Chc-1141Chondrus crispus46.016e-89 278
LLPS-Map-1000Magnaporthe poae44.227e-73 233
LLPS-Cae-0232Caenorhabditis elegans40.895e-77 245
LLPS-Cym-0576Cyanidioschyzon merolae34.887e-58 204
LLPS-Gaa-0374Gasterosteus aculeatus30.583e-38 145