LLPS-Cus-1140
Csa_3G851750
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Double-strand break repair protein |
Gene Name: | Csa_3G851750 |
Ensembl Gene: | Csa_3G851750 |
Ensembl Protein: | KGN59874 |
Organism: | Cucumis sativus |
Taxa ID: | 3659 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Chromatin, Nucleolus, Others | Predicted from orthologs | (View) |
▼ FUNCTION
Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | KGN59874 | KGN59874 |
UniProt | A0A0A0LFW7, A0A0A0LFW7_CUCSA | |
GeneBank | CM002924 | KGN59874.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGELSREEMK NTLRVLVATD CHLGYLEKDE IRRHDSFKAF EEICSIAEQK QVDFLLLGGD 60 61 LFHENKPSRS TLVKAIEILR RHCLNDKPVQ FQVVSDQTIN FPNTFGHVNY EDPHFNVGLP 120 121 VFSIHGNHDD PAGVDNLSAV DILSACNLVN YFGKMVLGGS GVGQITLCPI LIRKGSTSVA 180 181 LYGLGNIRDE RLNRMFQTPH AVQWMRPEAQ EGCQVTDWFN ILVLHQNRVK ANPKNAINEH 240 241 FLPRFLDFIV WGHEHECLVD PLEVPGMGFH ITQPGSSVAT SLIDGESKPK HVLLLEIKGN 300 301 QYRPTKIPLT SVRPFEYTEI VLKDEPDIDS NDQNSIIEHL DKVVDYSGFM TINPQRFGQK 360 361 YVGKVANPQD ILIFSKASRK GRNEVKIDDS ERLRPEELNQ QNIEALVAEN NLKMEILPVN 420 421 DLDVALHNFV NKDDKMAFYS CVQYNLEETR NKISHDADSL KFEEEDLILK VGECLEEKIY 480 481 ILQDRVKERN THSKNDTVFT SSIQSSKDFG SRSSMTVGSA VSFSDDEDAA KTSGSKSTRG 540 541 RKVSSRAAED TSTKTSTRGR GRGRGRGSSS SLKQTTLDAA LGFRKSQRSA TAAVQSIVNT 600 601 DAMNSASSGE ARENEVEEIN DSSENDESLL SKGRKRTAPR GRGRGSTQSK RGRKSDNSLV 660 661 QRTFISRDND DDSEDEDNAR KLLNKSQPRV TRNYGALRR 699 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGGGAGT TGTCTCGGGA GGAGATGAAA AATACACTTC GAGTACTTGT CGCAACAGAT 60 61 TGCCATCTGG GCTACTTGGA GAAGGATGAG ATAAGGCGAC ATGATTCATT CAAGGCATTT 120 121 GAAGAGATAT GCTCAATTGC AGAACAAAAG CAGGTGGATT TTTTACTTCT TGGCGGTGAC 180 181 CTTTTCCATG AGAACAAGCC ATCACGATCG ACATTAGTGA AGGCAATAGA GATCCTGCGG 240 241 CGTCATTGCC TTAATGATAA ACCGGTGCAG TTCCAAGTTG TTAGCGACCA AACCATCAAT 300 301 TTTCCAAACA CATTTGGCCA TGTCAACTAC GAAGATCCTC ATTTTAATGT TGGTTTACCA 360 361 GTATTCAGTA TTCATGGAAA CCATGATGAT CCTGCTGGAG TGGACAACCT TTCTGCCGTT 420 421 GATATTCTCT CTGCATGCAA TCTTGTGAAC TACTTTGGGA AAATGGTTCT TGGTGGTTCT 480 481 GGTGTTGGTC AGATCACGCT CTGCCCCATT CTTATCAGAA AGGGTTCAAC ATCAGTAGCT 540 541 CTTTATGGTC TTGGAAATAT TAGAGATGAA AGGCTGAACA GGATGTTCCA GACACCACAT 600 601 GCTGTTCAGT GGATGCGGCC GGAAGCACAG GAAGGCTGTC AAGTGACAGA CTGGTTCAAT 660 661 ATTCTGGTAC TTCATCAAAA CAGAGTAAAG GCAAATCCTA AAAATGCAAT AAATGAGCAT 720 721 TTTTTACCTC GCTTCCTGGA CTTCATTGTT TGGGGACATG AACACGAATG TTTGGTTGAC 780 781 CCTCTGGAAG TTCCTGGGAT GGGGTTTCAC ATCACACAAC CAGGTTCCTC AGTTGCAACA 840 841 TCATTGATTG ATGGTGAATC AAAACCAAAA CATGTTCTTT TGTTGGAAAT TAAGGGTAAT 900 901 CAATATCGGC CAACCAAGAT ACCTTTGACA TCTGTAAGAC CATTTGAGTA CACAGAGATT 960 961 GTATTGAAGG ACGAGCCTGA CATCGACTCT AATGATCAAA ACTCAATTAT CGAACACTTA 1020 1021 GACAAAGTGG TGGATTATTC TGGGTTTATG ACAATAAATC CTCAAAGGTT TGGTCAGAAA 1080 1081 TATGTTGGGA AGGTAGCAAA TCCTCAAGAC ATCCTTATAT TCTCAAAAGC TTCAAGGAAA 1140 1141 GGCCGCAATG AAGTGAAAAT TGACGATTCA GAAAGGCTTC GTCCAGAAGA ACTGAATCAA 1200 1201 CAAAATATAG AGGCTTTAGT TGCTGAAAAT AATCTGAAAA TGGAGATCCT TCCTGTCAAT 1260 1261 GATTTGGATG TTGCGTTGCA CAATTTCGTA AATAAAGATG ACAAAATGGC ATTTTATTCC 1320 1321 TGCGTGCAAT ACAATCTAGA AGAAACACGA AATAAAATTT CTCATGATGC GGATTCTTTG 1380 1381 AAGTTTGAAG AAGAAGATTT AATTCTTAAA GTTGGCGAGT GCTTGGAGGA AAAGATATAT 1440 1441 ATTTTGCAGG ACCGAGTCAA GGAGAGGAAC ACCCATTCCA AGAATGATAC GGTATTCACA 1500 1501 TCATCTATTC AGTCTTCAAA AGATTTCGGT AGTAGAAGTT CCATGACAGT TGGGTCTGCT 1560 1561 GTTTCTTTTA GTGATGATGA GGATGCAGCA AAAACGTCTG GATCAAAATC CACTAGAGGT 1620 1621 CGTAAAGTAT CATCTAGGGC AGCTGAAGAC ACTTCAACTA AAACTTCCAC ACGAGGAAGA 1680 1681 GGAAGGGGTA GAGGGAGGGG GAGCAGTAGT AGCCTTAAGC AGACAACTCT CGATGCAGCT 1740 1741 CTTGGATTTC GCAAATCACA AAGATCTGCA ACTGCTGCTG TTCAAAGCAT AGTCAACACA 1800 1801 GATGCTATGA ATTCTGCTTC TAGTGGAGAA GCAAGGGAAA ATGAAGTTGA AGAAATTAAT 1860 1861 GACAGTTCGG AAAATGATGA AAGTCTTCTC AGCAAAGGAA GAAAGCGCAC TGCTCCAAGG 1920 1921 GGTAGAGGGA GAGGATCCAC TCAATCTAAA CGAGGAAGGA AATCTGACAA CTCTTTGGTT 1980 1981 CAGCGAACGT TCATAAGTAG AGATAATGAC GATGATAGTG AAGATGAAGA CAACGCTAGA 2040 2041 AAGCTATTAA ATAAGTCTCA GCCTCGGGTG ACAAGAAATT ATGGTGCATT GAGAAGGTAA 2100 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Mre11 complex | |
Molecular Function | 3'-5' exonuclease activity | |
Molecular Function | Endonuclease activity | |
Molecular Function | Manganese ion binding | |
Biological Process | Double-strand break repair | |
Biological Process | Meiotic cell cycle |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sot-0903 | Solanum tuberosum | 90.5 | 3e-112 | 348 |
LLPS-Mua-1765 | Musa acuminata | 81.55 | 0.0 | 692 |
LLPS-Vir-0919 | Vigna radiata | 76.75 | 0.0 | 649 |
LLPS-Viv-0269 | Vitis vinifera | 75.27 | 0.0 | 1053 |
LLPS-Met-2128 | Medicago truncatula | 74.23 | 0.0 | 1011 |
LLPS-Prp-0258 | Prunus persica | 74.18 | 0.0 | 1050 |
LLPS-Glm-0314 | Glycine max | 74.17 | 0.0 | 1042 |
LLPS-Via-1064 | Vigna angularis | 73.96 | 0.0 | 1018 |
LLPS-Pot-0857 | Populus trichocarpa | 73.74 | 0.0 | 1008 |
LLPS-Thc-1712 | Theobroma cacao | 73.71 | 0.0 | 1016 |
LLPS-Phv-0475 | Phaseolus vulgaris | 73.55 | 0.0 | 1021 |
LLPS-Sei-0865 | Setaria italica | 73.38 | 0.0 | 864 |
LLPS-Mae-0652 | Manihot esculenta | 72.9 | 0.0 | 1065 |
LLPS-Nia-0074 | Nicotiana attenuata | 72.87 | 0.0 | 1030 |
LLPS-Gor-0523 | Gossypium raimondii | 72.84 | 0.0 | 1038 |
LLPS-Dac-0491 | Daucus carota | 72.41 | 0.0 | 915 |
LLPS-Arl-1259 | Arabidopsis lyrata | 72.32 | 0.0 | 1003 |
LLPS-Art-2126 | Arabidopsis thaliana | 72.27 | 0.0 | 1011 |
LLPS-Php-0104 | Physcomitrella patens | 71.81 | 0.0 | 765 |
LLPS-Bro-0377 | Brassica oleracea | 71.66 | 0.0 | 1005 |
LLPS-Brn-2476 | Brassica napus | 70.64 | 0.0 | 950 |
LLPS-Brr-1236 | Brassica rapa | 70.56 | 0.0 | 986 |
LLPS-Hea-0853 | Helianthus annuus | 69.75 | 0.0 | 960 |
LLPS-Coc-0972 | Corchorus capsularis | 68.9 | 0.0 | 937 |
LLPS-Amt-1590 | Amborella trichopoda | 66.44 | 0.0 | 927 |
LLPS-Ors-0611 | Oryza sativa | 66.39 | 0.0 | 885 |
LLPS-Org-1050 | Oryza glaberrima | 65.93 | 0.0 | 887 |
LLPS-Ori-2146 | Oryza indica | 65.54 | 0.0 | 855 |
LLPS-Orm-0394 | Oryza meridionalis | 65.53 | 0.0 | 887 |
LLPS-Brd-0908 | Brachypodium distachyon | 64.84 | 0.0 | 897 |
LLPS-Orgl-1491 | Oryza glumaepatula | 64.45 | 0.0 | 856 |
LLPS-Orni-1252 | Oryza nivara | 64.45 | 0.0 | 858 |
LLPS-Orr-0584 | Oryza rufipogon | 64.45 | 0.0 | 857 |
LLPS-Orb-1225 | Oryza barthii | 64.18 | 0.0 | 855 |
LLPS-Sob-0211 | Sorghum bicolor | 64.08 | 0.0 | 881 |
LLPS-Tra-1983 | Triticum aestivum | 64.0 | 0.0 | 900 |
LLPS-Orbr-0065 | Oryza brachyantha | 63.95 | 0.0 | 871 |
LLPS-Hov-0165 | Hordeum vulgare | 63.72 | 0.0 | 899 |
LLPS-Orp-0416 | Oryza punctata | 62.86 | 0.0 | 857 |
LLPS-Tru-1393 | Triticum urartu | 62.58 | 0.0 | 620 |
LLPS-Zem-2234 | Zea mays | 59.51 | 0.0 | 827 |
LLPS-Lep-0622 | Leersia perrieri | 55.89 | 0.0 | 609 |
LLPS-Sem-0624 | Selaginella moellendorffii | 55.56 | 0.0 | 721 |
LLPS-Cis-1233 | Ciona savignyi | 54.63 | 5e-69 | 231 |
LLPS-Dio-2363 | Dipodomys ordii | 54.27 | 8e-69 | 230 |
LLPS-Mea-2031 | Mesocricetus auratus | 52.76 | 4e-67 | 226 |
LLPS-Chr-0252 | Chlamydomonas reinhardtii | 47.91 | 1e-150 | 470 |
LLPS-Cae-1533 | Caenorhabditis elegans | 44.61 | 2e-85 | 291 |
LLPS-Osl-1341 | Ostreococcus lucimarinus | 44.31 | 1e-138 | 425 |
LLPS-Scm-0123 | Scophthalmus maximus | 43.97 | 2e-124 | 390 |
LLPS-Icp-1764 | Ictalurus punctatus | 43.87 | 4e-119 | 379 |
LLPS-Ten-1652 | Tetraodon nigroviridis | 43.65 | 4e-123 | 389 |
LLPS-Pof-0084 | Poecilia formosa | 43.42 | 7e-124 | 392 |
LLPS-Tar-2976 | Takifugu rubripes | 43.24 | 1e-121 | 385 |
LLPS-Orl-2658 | Oryzias latipes | 43.03 | 3e-122 | 387 |
LLPS-Xim-0571 | Xiphophorus maculatus | 43.0 | 9e-123 | 390 |
LLPS-Orn-0021 | Oreochromis niloticus | 42.92 | 6e-119 | 379 |
LLPS-Gaa-3106 | Gasterosteus aculeatus | 42.68 | 5e-121 | 384 |
LLPS-Sah-3052 | Sarcophilus harrisii | 42.32 | 4e-121 | 381 |
LLPS-Mod-0826 | Monodelphis domestica | 42.32 | 4e-120 | 382 |
LLPS-Anc-3799 | Anolis carolinensis | 42.29 | 2e-121 | 385 |
LLPS-Lac-0337 | Latimeria chalumnae | 41.87 | 7e-122 | 387 |
LLPS-Abg-0082 | Absidia glauca | 41.35 | 1e-110 | 357 |
LLPS-Pes-0377 | Pelodiscus sinensis | 41.31 | 2e-125 | 396 |
LLPS-Gas-0333 | Galdieria sulphuraria | 41.28 | 1e-115 | 369 |
LLPS-Trv-0512 | Trichoderma virens | 41.25 | 7e-112 | 355 |
LLPS-Tum-0769 | Tuber melanosporum | 41.08 | 3e-115 | 371 |
LLPS-Ved-0106 | Verticillium dahliae | 41.07 | 2e-117 | 376 |
LLPS-Trr-0966 | Trichoderma reesei | 41.02 | 5e-112 | 362 |
LLPS-Anp-1696 | Anas platyrhynchos | 40.88 | 2e-121 | 385 |
LLPS-Gaga-2243 | Gallus gallus | 40.82 | 7e-119 | 379 |
LLPS-Meg-1413 | Meleagris gallopavo | 40.82 | 2e-119 | 380 |
LLPS-Cogr-1201 | Colletotrichum graminicola | 40.79 | 5e-118 | 376 |
LLPS-Cii-0132 | Ciona intestinalis | 40.76 | 6e-114 | 360 |
LLPS-Nec-1218 | Neurospora crassa | 40.71 | 2e-110 | 358 |
LLPS-Cog-0031 | Colletotrichum gloeosporioides | 40.56 | 5e-116 | 371 |
LLPS-Dar-3628 | Danio rerio | 40.25 | 8e-120 | 381 |
LLPS-Fus-0423 | Fusarium solani | 40.21 | 2e-110 | 351 |
LLPS-Pug-0950 | Puccinia graminis | 40.2 | 2e-111 | 360 |
LLPS-Mao-0908 | Magnaporthe oryzae | 40.16 | 6e-113 | 364 |
LLPS-Cap-3833 | Cavia porcellus | 40.11 | 6e-125 | 395 |
LLPS-Kop-1197 | Komagataella pastoris | 40.08 | 3e-98 | 324 |
LLPS-Mum-0703 | Mus musculus | 39.96 | 4e-121 | 385 |
LLPS-Myl-3391 | Myotis lucifugus | 39.93 | 2e-120 | 383 |
LLPS-Asn-0851 | Aspergillus nidulans | 39.88 | 2e-109 | 357 |
LLPS-Beb-0055 | Beauveria bassiana | 39.88 | 5e-112 | 361 |
LLPS-Leo-2813 | Lepisosteus oculatus | 39.82 | 3e-118 | 377 |
LLPS-Urm-1152 | Ursus maritimus | 39.75 | 3e-124 | 393 |
LLPS-Maf-0225 | Macaca fascicularis | 39.69 | 2e-124 | 393 |
LLPS-Fec-0903 | Felis catus | 39.69 | 2e-125 | 396 |
LLPS-Asm-3079 | Astyanax mexicanus | 39.66 | 4e-117 | 374 |
LLPS-Orc-3580 | Oryctolagus cuniculus | 39.66 | 9e-121 | 384 |
LLPS-Scp-0354 | Schizosaccharomyces pombe | 39.63 | 1e-106 | 345 |
LLPS-Pap-2534 | Pan paniscus | 39.61 | 3e-124 | 392 |
LLPS-Scj-1169 | Schizosaccharomyces japonicus | 39.59 | 3e-103 | 337 |
LLPS-Fuv-1249 | Fusarium verticillioides | 39.54 | 1e-110 | 358 |
LLPS-Spr-0397 | Sporisorium reilianum | 39.53 | 4e-103 | 341 |
LLPS-Phn-0290 | Phaeosphaeria nodorum | 39.53 | 4e-115 | 370 |
LLPS-Mup-3030 | Mustela putorius furo | 39.51 | 4e-123 | 390 |
LLPS-Chs-2786 | Chlorocebus sabaeus | 39.51 | 3e-124 | 393 |
LLPS-Gog-1857 | Gorilla gorilla | 39.51 | 5e-124 | 392 |
LLPS-Mam-0489 | Macaca mulatta | 39.51 | 1e-123 | 391 |
LLPS-Xet-2556 | Xenopus tropicalis | 39.51 | 1e-122 | 389 |
LLPS-Nol-1334 | Nomascus leucogenys | 39.51 | 3e-124 | 393 |
LLPS-Hos-1253 | Homo sapiens | 39.51 | 6e-124 | 392 |
LLPS-Man-1406 | Macaca nemestrina | 39.51 | 2e-123 | 391 |
LLPS-Tut-0615 | Tursiops truncatus | 39.48 | 6e-123 | 389 |
LLPS-Eqc-2743 | Equus caballus | 39.47 | 4e-122 | 387 |
LLPS-Pat-3721 | Pan troglodytes | 39.44 | 8e-123 | 391 |
LLPS-Otg-2991 | Otolemur garnettii | 39.44 | 1e-125 | 397 |
LLPS-Aim-3349 | Ailuropoda melanoleuca | 39.41 | 1e-123 | 391 |
LLPS-Ran-2500 | Rattus norvegicus | 39.4 | 4e-120 | 382 |
LLPS-Scs-0470 | Sclerotinia sclerotiorum | 39.35 | 4e-111 | 359 |
LLPS-Paa-2936 | Papio anubis | 39.34 | 3e-123 | 390 |
LLPS-Mal-0966 | Mandrillus leucophaeus | 39.34 | 3e-123 | 390 |
LLPS-Cea-1631 | Cercocebus atys | 39.34 | 3e-123 | 390 |
LLPS-Mel-0308 | Melampsora laricipopulina | 39.26 | 9e-109 | 345 |
LLPS-Put-0717 | Puccinia triticina | 39.26 | 3e-111 | 360 |
LLPS-Fud-2349 | Fukomys damarensis | 39.25 | 8e-122 | 387 |
LLPS-Caj-2242 | Callithrix jacchus | 39.18 | 4e-124 | 392 |
LLPS-Pyt-0971 | Pyrenophora teres | 39.16 | 9e-113 | 364 |
LLPS-Pytr-0646 | Pyrenophora triticirepentis | 39.16 | 3e-113 | 365 |
LLPS-Map-1396 | Magnaporthe poae | 39.07 | 1e-111 | 362 |
LLPS-Tag-0276 | Taeniopygia guttata | 39.04 | 7e-119 | 376 |
LLPS-Usm-0781 | Ustilago maydis | 39.01 | 6e-99 | 330 |
LLPS-Coo-0457 | Colletotrichum orbiculare | 38.92 | 1e-112 | 362 |
LLPS-Ova-3613 | Ovis aries | 38.87 | 6e-124 | 392 |
LLPS-Lem-1272 | Leptosphaeria maculans | 38.85 | 2e-105 | 358 |
LLPS-Caf-3770 | Canis familiaris | 38.73 | 4e-124 | 392 |
LLPS-Bot-1109 | Bos taurus | 38.7 | 9e-123 | 389 |
LLPS-Fia-0213 | Ficedula albicollis | 38.7 | 3e-121 | 385 |
LLPS-Ast-0388 | Aspergillus terreus | 38.68 | 3e-107 | 350 |
LLPS-Aso-0155 | Aspergillus oryzae | 38.65 | 2e-106 | 340 |
LLPS-Cas-0078 | Carlito syrichta | 38.65 | 3e-121 | 385 |
LLPS-Ora-0564 | Ornithorhynchus anatinus | 38.5 | 8e-85 | 286 |
LLPS-Loa-1074 | Loxodonta africana | 38.46 | 1e-117 | 376 |
LLPS-Asf-0519 | Aspergillus flavus | 38.43 | 4e-106 | 347 |
LLPS-Scf-1919 | Scleropages formosus | 38.41 | 5e-123 | 390 |
LLPS-Gag-1084 | Gaeumannomyces graminis | 38.37 | 3e-111 | 361 |
LLPS-Zyt-0281 | Zymoseptoria tritici | 38.11 | 1e-106 | 348 |
LLPS-Asni-0275 | Aspergillus niger | 38.1 | 2e-106 | 347 |
LLPS-Scc-0553 | Schizosaccharomyces cryophilus | 38.09 | 6e-112 | 359 |
LLPS-Blg-0295 | Blumeria graminis | 38.02 | 1e-101 | 333 |
LLPS-Ict-0717 | Ictidomys tridecemlineatus | 37.89 | 3e-122 | 387 |
LLPS-Yal-1467 | Yarrowia lipolytica | 37.76 | 4e-102 | 335 |
LLPS-Asc-0461 | Aspergillus clavatus | 37.52 | 1e-107 | 352 |
LLPS-Nef-0341 | Neosartorya fischeri | 37.48 | 2e-107 | 351 |
LLPS-Dos-1197 | Dothistroma septosporum | 37.34 | 3e-101 | 334 |
LLPS-Asfu-1248 | Aspergillus fumigatus | 37.29 | 2e-108 | 353 |
LLPS-Drm-1505 | Drosophila melanogaster | 36.99 | 3e-98 | 322 |
LLPS-Crn-0914 | Cryptococcus neoformans | 36.57 | 6e-104 | 340 |
LLPS-Sus-3730 | Sus scrofa | 36.44 | 2e-88 | 296 |
LLPS-Rhb-2159 | Rhinopithecus bieti | 36.19 | 1e-101 | 332 |
LLPS-Aon-3967 | Aotus nancymaae | 35.99 | 2e-95 | 315 |
LLPS-Chc-0596 | Chondrus crispus | 35.89 | 2e-88 | 300 |
LLPS-Miv-1433 | Microbotryum violaceum | 35.77 | 4e-90 | 303 |
LLPS-Sac-0974 | Saccharomyces cerevisiae | 35.25 | 8e-95 | 315 |
LLPS-Asg-1114 | Ashbya gossypii | 34.89 | 1e-97 | 322 |
LLPS-Cym-0209 | Cyanidioschyzon merolae | 34.58 | 1e-75 | 263 |
LLPS-Fuo-0219 | Fusarium oxysporum | 28.96 | 2e-14 | 80.5 |