LLPS-Cii-1549
LOC100178569
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | ATP-dependent RNA helicase DDX19B |
Gene Name: | LOC100178569 |
Ensembl Gene: | ENSCING00000007756.3 |
Ensembl Protein: | ENSCINP00000015910.3 |
Organism: | Ciona intestinalis |
Taxa ID: | 7719 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear pore complex, Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSCINT00000015910.3 | ENSCINP00000015910.3 |
UniProt | F6XTY4, F6XTY4_CIOIN, A0A1W2W468 | |
GeneBank | EAAA01000253 | |
RefSeq | , XM_002120724.1 | , XP_002120760.1, XP_002120760.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MTDENWAEAV DKQEQLSKKV DTLHINANSN LNKKNESLPQ LVEPTVPVTD ENYEKPLTHE 60 61 ESALLKKLLH DKLIQSNQEL QVQQRDPTSP LFSAKSFEEL NLKEELVQGI FAMGFNRPSK 120 121 IQETALPLLV CNPPQNMIAQ SQSGTGKTAA FVLTMLSRIN IENKYPQCVC LSPTYELALQ 180 181 TGKAVEQMGK YLKGLQVAYA IRGNQVQRNT NIPAQIVIGT PGTMLDWTRK RVFDLGKVEV 240 241 FVLDEADVMI DTQGFKDQSI RIQRQLSNKC QLLLFSATYD EQVMRFAEQI VHHPNIIKLR 300 301 RNEETLENIK QYYVKCSTIE KKYESIINLY GVLSVGQAII FCHTRKTAAW LAKRMCEDKH 360 361 IVALLSGELD VSQRAAVLRR FKEAKERVLV TTNVCSRGID VEQVTLVINF DLPVDYNRRP 420 421 DCETYLHRIG RTGRFGKTGV AINFVAHDQD MRILMEIQDH FGIKITNLDT GNHADMEEKL 480 481 GEED 484 |
Nucleotide CDS Sequence (FASTA) |
1 ATGACAGACG AAAATTGGGC TGAGGCTGTG GACAAGCAAG AACAATTATC TAAAAAGGTT 60 61 GATACACTGC ATATAAATGC CAACAGTAAT TTAAACAAGA AAAATGAATC GCTTCCCCAG 120 121 CTTGTGGAAC CTACTGTTCC AGTAACTGAT GAAAATTATG AAAAACCATT AACCCATGAA 180 181 GAAAGTGCTC TTCTCAAGAA ACTTCTTCAT GATAAGTTGA TACAGAGCAA CCAGGAGCTA 240 241 CAAGTTCAAC AACGAGATCC TACGTCACCA CTATTCTCTG CCAAGTCATT TGAAGAGCTC 300 301 AACTTAAAGG AAGAACTTGT TCAGGGAATC TTTGCCATGG GATTTAATAG GCCTTCAAAA 360 361 ATACAGGAAA CAGCTCTTCC ATTGCTTGTA TGTAACCCAC CACAAAACAT GATTGCACAG 420 421 TCACAGTCTG GAACCGGCAA AACTGCAGCG TTCGTTCTGA CCATGCTGAG TAGAATAAAT 480 481 ATTGAAAACA AATATCCACA ATGCGTGTGT CTATCCCCCA CATACGAGCT TGCTTTACAA 540 541 ACTGGAAAAG CTGTTGAGCA AATGGGAAAA TATCTAAAAG GACTTCAAGT TGCCTATGCT 600 601 ATTCGCGGAA ATCAAGTTCA ACGAAATACC AACATTCCTG CTCAGATTGT TATTGGAACC 660 661 CCGGGAACAA TGTTAGATTG GACAAGGAAG CGGGTATTTG ATCTTGGGAA AGTTGAAGTC 720 721 TTTGTTTTGG ATGAAGCAGA TGTTATGATA GATACTCAGG GATTTAAAGA TCAATCCATA 780 781 CGAATACAAA GGCAACTTTC TAATAAATGT CAGCTGCTTT TGTTCAGTGC TACTTATGAT 840 841 GAACAAGTTA TGAGATTTGC AGAGCAAATT GTTCATCATC CCAATATTAT TAAGCTAAGA 900 901 AGGAATGAAG AAACTCTTGA AAACATCAAG CAGTATTATG TCAAGTGCAG CACAATAGAA 960 961 AAAAAATACG AGTCCATAAT TAATTTGTAT GGTGTCTTGT CTGTGGGGCA AGCAATCATA 1020 1021 TTTTGCCATA CAAGAAAAAC AGCTGCATGG CTTGCTAAAA GAATGTGCGA AGATAAACAT 1080 1081 ATCGTTGCAT TGTTGAGTGG AGAGCTGGAT GTATCACAAA GAGCAGCTGT TTTAAGACGG 1140 1141 TTTAAGGAGG CAAAGGAGCG AGTTCTGGTG ACAACCAATG TTTGTTCTCG TGGCATTGAT 1200 1201 GTTGAGCAGG TGACACTTGT CATTAATTTT GACCTGCCAG TGGATTATAA CCGACGACCT 1260 1261 GATTGTGAAA CATATCTACA TCGTATCGGT CGTACTGGTC GCTTTGGAAA AACTGGCGTT 1320 1321 GCAATAAACT TTGTAGCTCA TGATCAGGAC ATGAGAATTC TAATGGAGAT TCAGGATCAC 1380 1381 TTTGGAATAA AGATAACAAA CCTGGACACT GGAAATCATG CAGATATGGA AGAGAAGTTG 1440 1441 GGAGAAGAGG ACTGA 1455 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Cis-0966 | Ciona savignyi | 79.88 | 0.0 | 810 |
LLPS-Fia-0454 | Ficedula albicollis | 63.55 | 0.0 | 564 |
LLPS-Anp-2277 | Anas platyrhynchos | 63.4 | 0.0 | 560 |
LLPS-Tag-2729 | Taeniopygia guttata | 63.07 | 0.0 | 556 |
LLPS-Ran-1524 | Rattus norvegicus | 62.83 | 0.0 | 560 |
LLPS-Myl-3553 | Myotis lucifugus | 62.59 | 0.0 | 556 |
LLPS-Lac-0034 | Latimeria chalumnae | 62.4 | 3e-175 | 505 |
LLPS-Caj-2707 | Callithrix jacchus | 62.2 | 0.0 | 533 |
LLPS-Chs-1913 | Chlorocebus sabaeus | 61.48 | 0.0 | 529 |
LLPS-Cea-1628 | Cercocebus atys | 61.48 | 0.0 | 530 |
LLPS-Mal-0121 | Mandrillus leucophaeus | 61.48 | 0.0 | 530 |
LLPS-Paa-0635 | Papio anubis | 61.48 | 0.0 | 530 |
LLPS-Man-0462 | Macaca nemestrina | 61.48 | 0.0 | 530 |
LLPS-Loa-3403 | Loxodonta africana | 61.48 | 0.0 | 553 |
LLPS-Otg-2091 | Otolemur garnettii | 61.48 | 0.0 | 538 |
LLPS-Rhb-2246 | Rhinopithecus bieti | 61.48 | 0.0 | 530 |
LLPS-Maf-1035 | Macaca fascicularis | 61.24 | 0.0 | 528 |
LLPS-Sus-0873 | Sus scrofa | 61.24 | 0.0 | 533 |
LLPS-Bot-3908 | Bos taurus | 61.24 | 0.0 | 534 |
LLPS-Caf-2632 | Canis familiaris | 61.24 | 0.0 | 528 |
LLPS-Mam-0245 | Macaca mulatta | 61.24 | 0.0 | 528 |
LLPS-Nol-4078 | Nomascus leucogenys | 61.24 | 0.0 | 528 |
LLPS-Mum-1386 | Mus musculus | 61.0 | 0.0 | 533 |
LLPS-Fec-3029 | Felis catus | 61.0 | 0.0 | 533 |
LLPS-Eqc-3486 | Equus caballus | 61.0 | 0.0 | 534 |
LLPS-Cas-0095 | Carlito syrichta | 61.0 | 0.0 | 530 |
LLPS-Mea-4053 | Mesocricetus auratus | 60.77 | 0.0 | 531 |
LLPS-Sah-0047 | Sarcophilus harrisii | 60.77 | 0.0 | 532 |
LLPS-Mod-1946 | Monodelphis domestica | 60.77 | 0.0 | 532 |
LLPS-Ict-2484 | Ictidomys tridecemlineatus | 60.77 | 0.0 | 533 |
LLPS-Pes-2653 | Pelodiscus sinensis | 60.62 | 0.0 | 538 |
LLPS-Pap-0214 | Pan paniscus | 59.95 | 0.0 | 534 |
LLPS-Pat-0182 | Pan troglodytes | 59.95 | 0.0 | 534 |
LLPS-Hos-3262 | Homo sapiens | 59.95 | 0.0 | 534 |
LLPS-Xet-2414 | Xenopus tropicalis | 59.95 | 0.0 | 526 |
LLPS-Meg-0133 | Meleagris gallopavo | 59.93 | 7e-118 | 354 |
LLPS-Gog-3452 | Gorilla gorilla | 59.49 | 0.0 | 528 |
LLPS-Poa-2546 | Pongo abelii | 59.49 | 0.0 | 529 |
LLPS-Ora-2146 | Ornithorhynchus anatinus | 59.09 | 0.0 | 527 |
LLPS-Gaga-3786 | Gallus gallus | 58.71 | 1e-176 | 516 |
LLPS-Fud-0764 | Fukomys damarensis | 58.46 | 0.0 | 576 |
LLPS-Urm-3063 | Ursus maritimus | 58.39 | 0.0 | 533 |
LLPS-Dar-3155 | Danio rerio | 58.06 | 0.0 | 579 |
LLPS-Scf-0491 | Scleropages formosus | 58.04 | 0.0 | 572 |
LLPS-Orc-2267 | Oryctolagus cuniculus | 58.02 | 0.0 | 577 |
LLPS-Orn-2511 | Oreochromis niloticus | 57.97 | 0.0 | 578 |
LLPS-Aon-0601 | Aotus nancymaae | 57.95 | 0.0 | 548 |
LLPS-Icp-0146 | Ictalurus punctatus | 57.88 | 0.0 | 558 |
LLPS-Orl-1360 | Oryzias latipes | 57.73 | 0.0 | 575 |
LLPS-Anc-3070 | Anolis carolinensis | 57.48 | 1e-180 | 523 |
LLPS-Ere-0433 | Erinaceus europaeus | 57.4 | 8e-179 | 517 |
LLPS-Ova-0179 | Ovis aries | 57.39 | 0.0 | 531 |
LLPS-Tar-2451 | Takifugu rubripes | 57.38 | 0.0 | 577 |
LLPS-Tut-1786 | Tursiops truncatus | 57.2 | 0.0 | 566 |
LLPS-Dio-1062 | Dipodomys ordii | 57.2 | 0.0 | 569 |
LLPS-Mup-1728 | Mustela putorius furo | 57.2 | 0.0 | 570 |
LLPS-Scm-0081 | Scophthalmus maximus | 57.05 | 0.0 | 558 |
LLPS-Leo-1397 | Lepisosteus oculatus | 56.94 | 0.0 | 572 |
LLPS-Gaa-3162 | Gasterosteus aculeatus | 56.94 | 0.0 | 569 |
LLPS-Cap-0377 | Cavia porcellus | 56.86 | 0.0 | 551 |
LLPS-Aim-2139 | Ailuropoda melanoleuca | 56.78 | 0.0 | 555 |
LLPS-Pof-2933 | Poecilia formosa | 56.76 | 0.0 | 574 |
LLPS-Ten-2671 | Tetraodon nigroviridis | 56.76 | 0.0 | 576 |
LLPS-Xim-0262 | Xiphophorus maculatus | 56.56 | 0.0 | 576 |
LLPS-Asm-2121 | Astyanax mexicanus | 55.69 | 0.0 | 556 |
LLPS-Drm-1103 | Drosophila melanogaster | 55.45 | 3e-170 | 496 |
LLPS-Scc-1114 | Schizosaccharomyces cryophilus | 51.22 | 2e-148 | 441 |
LLPS-Abg-1019 | Absidia glauca | 49.76 | 2e-136 | 409 |
LLPS-Asg-0736 | Ashbya gossypii | 47.69 | 1e-133 | 402 |
LLPS-Zyt-0507 | Zymoseptoria tritici | 47.29 | 4e-123 | 377 |
LLPS-Kop-0329 | Komagataella pastoris | 47.2 | 1e-128 | 390 |
LLPS-Put-0301 | Puccinia triticina | 47.2 | 1e-122 | 374 |
LLPS-Asf-0906 | Aspergillus flavus | 47.03 | 1e-126 | 384 |
LLPS-Tum-0277 | Tuber melanosporum | 46.87 | 1e-127 | 386 |
LLPS-Scp-0531 | Schizosaccharomyces pombe | 46.82 | 1e-139 | 419 |
LLPS-Aso-0612 | Aspergillus oryzae | 46.78 | 2e-126 | 384 |
LLPS-Spr-0140 | Sporisorium reilianum | 46.62 | 7e-127 | 385 |
LLPS-Mel-0683 | Melampsora laricipopulina | 46.44 | 1e-124 | 380 |
LLPS-Gas-1116 | Galdieria sulphuraria | 46.25 | 4e-119 | 363 |
LLPS-Cae-1158 | Caenorhabditis elegans | 46.1 | 2e-132 | 415 |
LLPS-Asni-0365 | Aspergillus niger | 46.04 | 3e-124 | 378 |
LLPS-Pug-0105 | Puccinia graminis | 45.93 | 3e-132 | 401 |
LLPS-Lem-0335 | Leptosphaeria maculans | 45.73 | 1e-112 | 348 |
LLPS-Scj-1110 | Schizosaccharomyces japonicus | 45.68 | 3e-143 | 427 |
LLPS-Asn-1043 | Aspergillus nidulans | 45.3 | 9e-125 | 379 |
LLPS-Usm-0101 | Ustilago maydis | 45.27 | 3e-129 | 390 |
LLPS-Ast-0930 | Aspergillus terreus | 45.11 | 7e-125 | 380 |
LLPS-Phn-0701 | Phaeosphaeria nodorum | 44.97 | 1e-112 | 348 |
LLPS-Asc-1481 | Aspergillus clavatus | 44.8 | 1e-121 | 372 |
LLPS-Ved-0666 | Verticillium dahliae | 44.5 | 4e-124 | 378 |
LLPS-Yal-1145 | Yarrowia lipolytica | 44.39 | 9e-121 | 369 |
LLPS-Pytr-1134 | Pyrenophora triticirepentis | 44.22 | 9e-116 | 357 |
LLPS-Nef-0393 | Neosartorya fischeri | 44.15 | 8e-120 | 367 |
LLPS-Dos-0475 | Dothistroma septosporum | 44.15 | 2e-112 | 349 |
LLPS-Sac-0948 | Saccharomyces cerevisiae | 44.11 | 3e-134 | 404 |
LLPS-Mao-1505 | Magnaporthe oryzae | 44.07 | 3e-117 | 360 |
LLPS-Pyt-0854 | Pyrenophora teres | 43.97 | 5e-115 | 355 |
LLPS-Blg-1479 | Blumeria graminis | 43.97 | 8e-111 | 344 |
LLPS-Nec-1561 | Neurospora crassa | 43.88 | 9e-123 | 374 |
LLPS-Miv-0432 | Microbotryum violaceum | 43.83 | 1e-132 | 400 |
LLPS-Coo-0072 | Colletotrichum orbiculare | 43.61 | 7e-120 | 367 |
LLPS-Cym-1053 | Cyanidioschyzon merolae | 43.4 | 9e-115 | 356 |
LLPS-Scs-0156 | Sclerotinia sclerotiorum | 43.24 | 7e-123 | 374 |
LLPS-Map-0276 | Magnaporthe poae | 43.1 | 5e-106 | 331 |
LLPS-Gag-0669 | Gaeumannomyces graminis | 42.86 | 1e-120 | 369 |
LLPS-Cogr-1145 | Colletotrichum graminicola | 42.79 | 6e-120 | 367 |
LLPS-Asfu-0424 | Aspergillus fumigatus | 42.47 | 8e-120 | 367 |
LLPS-Coc-1240 | Corchorus capsularis | 42.35 | 1e-94 | 302 |
LLPS-Fus-1337 | Fusarium solani | 42.04 | 1e-116 | 359 |
LLPS-Osl-0892 | Ostreococcus lucimarinus | 41.94 | 1e-89 | 289 |
LLPS-Cog-1045 | Colletotrichum gloeosporioides | 41.8 | 7e-118 | 362 |
LLPS-Mua-0460 | Musa acuminata | 41.25 | 3e-92 | 296 |
LLPS-Sot-1434 | Solanum tuberosum | 41.15 | 9e-86 | 276 |
LLPS-Chc-0018 | Chondrus crispus | 41.09 | 6e-108 | 336 |
LLPS-Beb-1108 | Beauveria bassiana | 41.04 | 1e-111 | 346 |
LLPS-Gor-1004 | Gossypium raimondii | 40.93 | 7e-93 | 298 |
LLPS-Nia-2480 | Nicotiana attenuata | 40.89 | 3e-85 | 275 |
LLPS-Sem-2420 | Selaginella moellendorffii | 40.62 | 4e-91 | 293 |
LLPS-Fuv-0117 | Fusarium verticillioides | 40.53 | 4e-115 | 355 |
LLPS-Fuo-0442 | Fusarium oxysporum | 40.53 | 4e-115 | 355 |
LLPS-Brn-1124 | Brassica napus | 40.52 | 8e-86 | 276 |
LLPS-Thc-1588 | Theobroma cacao | 40.52 | 2e-86 | 278 |
LLPS-Arl-0954 | Arabidopsis lyrata | 40.52 | 4e-86 | 277 |
LLPS-Pot-1200 | Populus trichocarpa | 40.52 | 7e-86 | 276 |
LLPS-Prp-1612 | Prunus persica | 40.52 | 3e-85 | 275 |
LLPS-Bro-0062 | Brassica oleracea | 40.52 | 2e-85 | 275 |
LLPS-Php-1084 | Physcomitrella patens | 40.49 | 2e-94 | 301 |
LLPS-Crn-0345 | Cryptococcus neoformans | 40.48 | 1e-87 | 281 |
LLPS-Chr-0131 | Chlamydomonas reinhardtii | 40.05 | 1e-85 | 278 |
LLPS-Dac-1259 | Daucus carota | 39.95 | 3e-91 | 293 |
LLPS-Sol-1070 | Solanum lycopersicum | 39.22 | 1e-85 | 276 |
LLPS-Viv-0687 | Vitis vinifera | 39.19 | 3e-90 | 291 |
LLPS-Met-2127 | Medicago truncatula | 38.94 | 7e-86 | 279 |
LLPS-Amt-1283 | Amborella trichopoda | 38.92 | 3e-93 | 298 |
LLPS-Trr-0484 | Trichoderma reesei | 38.74 | 6e-117 | 359 |
LLPS-Trv-0080 | Trichoderma virens | 38.74 | 2e-115 | 355 |
LLPS-Mae-0648 | Manihot esculenta | 38.7 | 3e-85 | 275 |
LLPS-Zem-0445 | Zea mays | 38.64 | 1e-85 | 279 |
LLPS-Brd-0308 | Brachypodium distachyon | 38.24 | 2e-88 | 286 |
LLPS-Cus-0774 | Cucumis sativus | 38.15 | 5e-89 | 288 |
LLPS-Hov-1536 | Hordeum vulgare | 37.75 | 4e-89 | 288 |
LLPS-Tra-0111 | Triticum aestivum | 37.75 | 5e-89 | 288 |
LLPS-Phv-0254 | Phaseolus vulgaris | 37.71 | 7e-91 | 292 |
LLPS-Lep-0197 | Leersia perrieri | 37.65 | 1e-87 | 285 |
LLPS-Sob-1856 | Sorghum bicolor | 37.62 | 2e-86 | 281 |
LLPS-Vir-1524 | Vigna radiata | 37.47 | 2e-90 | 289 |
LLPS-Brr-0697 | Brassica rapa | 36.71 | 7e-86 | 279 |