LLPS-Brr-3003
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Ensembl Gene: | Bra028970 |
| Ensembl Protein: | Bra028970.1-P |
| Organism: | Brassica rapa |
| Taxa ID: | 51351 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Mitochondrial RNA granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bra028970.1 | Bra028970.1-P |
| UniProt | M4EJK4, M4EJK4_BRARP |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAGFSFSCFC FINPPILFTL PSESPLFLLG SGKDSPATRR RARKLVVSNA HSNPKIINPK 60 61 KKSRYGQTLS PYDSDEEEEL DDESDDDDDD WLLNDDFAEV TEYEKKKPKS QKTTIAKKGV 120 121 KEAVKSWETD EDDLDNASDK KKKVEKDSWR LDGRGKVSTR KHVAKLYPRL SEEIDIDPKW 180 181 VPLLDYLSTF GLKESHFVQM YERHMPSLQI NVVSAQERLD YLLSVGVKHR DIKRMLLRQP 240 241 QILQYTVENN LKAHISFLMG LGIPNSKIGQ IVAVTPSLFS YSVENSLRPT IRYLIEEVGI 300 301 NENDVGKVVQ LSPQILVQRL DITWNTRYMF LSKELGAPRD SVVKMVKRHP QILHYSIDDG 360 361 FLPRINFLRS IGMCNSDILK VLTSLTQVLS LSLEDNLKPK YMYLVNELKN EVHILTKYPM 420 421 YLSLSLDQRI RPRHRFLVEL KKVRKGPFPL SSLVPNDESF CQQWAGTSVD KYLAFRQRLL 480 481 LKDFANKYEK RG 492 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGGTT TCTCATTCTC CTGCTTCTGC TTCATAAACC CACCAATCCT CTTCACTCTC 60 61 CCCTCGGAAT CACCTCTCTT TCTTCTCGGT TCCGGCAAAG ATTCGCCGGC GACGAGACGG 120 121 CGAGCCAGAA AGCTCGTCGT ATCGAACGCA CACTCTAACC CCAAGATTAT AAACCCGAAG 180 181 AAGAAGTCTA GGTATGGGCA GACGTTGTCT CCGTATGACA GCGACGAAGA GGAAGAGCTT 240 241 GATGATGAGA GTGACGATGA TGATGATGAC TGGTTACTCA ATGATGACTT CGCAGAGGTG 300 301 ACAGAGTATG AAAAGAAGAA ACCAAAGTCA CAGAAGACAA CCATTGCTAA GAAAGGTGTG 360 361 AAGGAGGCCG TGAAAAGTTG GGAAACTGAT GAAGACGACT TAGATAATGC CTCTGACAAG 420 421 AAGAAGAAGG TGGAGAAGGA TTCTTGGCGT TTAGATGGCC GTGGAAAGGT GAGCACGAGG 480 481 AAACACGTCG CCAAACTATA CCCTCGTCTC TCAGAAGAGA TCGATATAGA CCCCAAATGG 540 541 GTACCTCTTC TGGACTACTT GAGCACATTC GGTCTGAAAG AGTCGCACTT CGTTCAAATG 600 601 TACGAGCGCC ACATGCCATC TCTCCAGATC AATGTGGTAT CAGCGCAAGA GAGGCTCGAC 660 661 TACTTGCTGA GCGTCGGTGT CAAACACAGA GACATCAAGA GAATGCTGTT GAGACAACCA 720 721 CAGATACTTC AGTACACGGT TGAGAACAAC CTCAAAGCTC ACATTTCCTT TCTGATGGGA 780 781 CTTGGGATCC CCAATTCCAA AATAGGACAG ATAGTTGCCG TAACCCCGTC TCTGTTCTCT 840 841 TACAGCGTCG AGAACTCCCT GAGACCCACC ATAAGGTATT TGATCGAAGA GGTTGGGATA 900 901 AACGAGAATG ATGTAGGCAA AGTTGTGCAG CTTAGCCCTC AGATTCTTGT TCAGAGGCTT 960 961 GATATAACGT GGAACACTCG TTACATGTTC CTCTCCAAGG AGTTGGGAGC GCCTAGGGAC 1020 1021 AGTGTGGTGA AGATGGTCAA GAGACATCCG CAGATTCTTC ACTACAGTAT TGATGATGGG 1080 1081 TTCTTGCCTC GGATCAATTT CCTTAGAAGC ATTGGGATGT GCAATTCTGA TATATTGAAA 1140 1141 GTCTTAACTA GCCTTACACA GGTTTTGTCT CTCTCACTGG AGGATAATCT GAAGCCTAAG 1200 1201 TACATGTATT TGGTCAATGA GCTGAAGAAC GAAGTGCACA TTTTGACTAA ATATCCGATG 1260 1261 TATCTGAGCT TGTCCTTGGA CCAAAGGATA CGCCCGCGGC ACCGGTTCTT GGTTGAGTTG 1320 1321 AAGAAAGTGC GGAAAGGGCC GTTCCCTCTT AGCTCACTGG TTCCAAACGA TGAGAGCTTT 1380 1381 TGTCAACAGT GGGCTGGAAC CAGTGTAGAT AAGTATCTCG CTTTTCGTCA GAGACTATTA 1440 1441 CTCAAGGATT TTGCAAACAA GTATGAAAAG AGAGGATAA 1479 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brn-0820 | Brassica napus | 99.19 | 0.0 | 909 |
| LLPS-Bro-0191 | Brassica oleracea | 95.59 | 0.0 | 857 |
| LLPS-Arl-1868 | Arabidopsis lyrata | 86.83 | 0.0 | 789 |
| LLPS-Art-2053 | Arabidopsis thaliana | 85.88 | 0.0 | 795 |
| LLPS-Sot-1790 | Solanum tuberosum | 76.37 | 2e-154 | 449 |
| LLPS-Lep-0166 | Leersia perrieri | 72.67 | 9e-160 | 471 |
| LLPS-Hov-0600 | Hordeum vulgare | 70.81 | 2e-154 | 457 |
| LLPS-Prp-1046 | Prunus persica | 70.51 | 0.0 | 592 |
| LLPS-Tru-1356 | Triticum urartu | 70.5 | 7e-153 | 452 |
| LLPS-Tra-0629 | Triticum aestivum | 69.63 | 1e-153 | 454 |
| LLPS-Vir-1689 | Vigna radiata | 69.35 | 8e-172 | 500 |
| LLPS-Coc-1880 | Corchorus capsularis | 68.74 | 0.0 | 585 |
| LLPS-Mua-1129 | Musa acuminata | 68.39 | 9e-175 | 509 |
| LLPS-Mae-1987 | Manihot esculenta | 67.74 | 0.0 | 571 |
| LLPS-Pot-2407 | Populus trichocarpa | 67.67 | 0.0 | 588 |
| LLPS-Gor-1726 | Gossypium raimondii | 67.35 | 0.0 | 578 |
| LLPS-Thc-0627 | Theobroma cacao | 67.34 | 0.0 | 588 |
| LLPS-Glm-0148 | Glycine max | 64.21 | 0.0 | 554 |
| LLPS-Met-0914 | Medicago truncatula | 63.46 | 0.0 | 538 |
| LLPS-Dac-1839 | Daucus carota | 63.28 | 0.0 | 556 |
| LLPS-Hea-0969 | Helianthus annuus | 62.99 | 0.0 | 539 |
| LLPS-Cus-0861 | Cucumis sativus | 62.5 | 0.0 | 562 |
| LLPS-Sol-1265 | Solanum lycopersicum | 60.49 | 3e-178 | 516 |
| LLPS-Nia-1340 | Nicotiana attenuata | 57.92 | 1e-177 | 515 |
| LLPS-Amt-2297 | Amborella trichopoda | 56.21 | 7e-167 | 489 |
| LLPS-Php-1532 | Physcomitrella patens | 47.98 | 6e-97 | 311 |
| LLPS-Loa-4046 | Loxodonta africana | 27.27 | 8e-09 | 61.6 |
| LLPS-Otg-4324 | Otolemur garnettii | 26.76 | 8e-08 | 58.5 |
| LLPS-Mea-2618 | Mesocricetus auratus | 26.62 | 9e-10 | 64.7 |
| LLPS-Tut-1824 | Tursiops truncatus | 26.41 | 7e-08 | 58.5 |
| LLPS-Caj-4438 | Callithrix jacchus | 26.24 | 6e-08 | 58.9 |
| LLPS-Aon-1042 | Aotus nancymaae | 26.24 | 5e-08 | 59.3 |
| LLPS-Ran-0877 | Rattus norvegicus | 26.24 | 7e-09 | 62.0 |
| LLPS-Ict-2723 | Ictidomys tridecemlineatus | 26.24 | 5e-08 | 59.3 |
| LLPS-Rhb-4498 | Rhinopithecus bieti | 26.18 | 2e-07 | 57.4 |
| LLPS-Dio-3420 | Dipodomys ordii | 26.07 | 7e-09 | 61.6 |
| LLPS-Fud-2384 | Fukomys damarensis | 25.89 | 2e-07 | 57.4 |
| LLPS-Maf-2888 | Macaca fascicularis | 25.72 | 2e-08 | 60.5 |
| LLPS-Mal-3224 | Mandrillus leucophaeus | 25.72 | 2e-08 | 60.8 |
| LLPS-Man-3818 | Macaca nemestrina | 25.72 | 2e-08 | 60.5 |
| LLPS-Mam-0923 | Macaca mulatta | 25.72 | 2e-08 | 60.5 |
| LLPS-Ova-3703 | Ovis aries | 25.7 | 3e-07 | 57.4 |
| LLPS-Cap-4432 | Cavia porcellus | 25.7 | 2e-07 | 57.4 |
| LLPS-Cea-4497 | Cercocebus atys | 25.54 | 2e-08 | 60.5 |
| LLPS-Paa-3976 | Papio anubis | 25.54 | 2e-08 | 60.5 |
| LLPS-Chs-2187 | Chlorocebus sabaeus | 25.36 | 3e-08 | 60.1 |
| LLPS-Aim-3574 | Ailuropoda melanoleuca | 25.35 | 5e-07 | 56.2 |
| LLPS-Mup-3968 | Mustela putorius furo | 25.35 | 7e-07 | 55.5 |
| LLPS-Urm-1299 | Ursus maritimus | 25.35 | 4e-07 | 56.6 |
| LLPS-Sem-2182 | Selaginella moellendorffii | 25.0 | 5e-12 | 70.1 |
| LLPS-Myl-4026 | Myotis lucifugus | 25.0 | 7e-07 | 55.8 |
| LLPS-Bot-3577 | Bos taurus | 24.65 | 3e-06 | 53.5 |
| LLPS-Hos-2460 | Homo sapiens | 24.64 | 2e-07 | 57.8 |
| LLPS-Pap-3558 | Pan paniscus | 24.64 | 2e-07 | 57.8 |
| LLPS-Pat-3984 | Pan troglodytes | 24.64 | 2e-07 | 57.8 |
| LLPS-Nol-4624 | Nomascus leucogenys | 24.64 | 2e-07 | 57.8 |
| LLPS-Mum-4472 | Mus musculus | 24.47 | 7e-06 | 52.4 |
| LLPS-Caf-2892 | Canis familiaris | 24.28 | 4e-06 | 53.1 |
| LLPS-Poa-4606 | Pongo abelii | 24.28 | 4e-07 | 56.6 |
| LLPS-Icp-0563 | Ictalurus punctatus | 24.04 | 6e-06 | 52.4 |
| LLPS-Fec-2324 | Felis catus | 24.01 | 1e-06 | 55.1 |
| LLPS-Viv-2205 | Vitis vinifera | 23.92 | 3e-21 | 101 |
| LLPS-Ten-3387 | Tetraodon nigroviridis | 23.81 | 7e-06 | 52.0 |
| LLPS-Asm-1529 | Astyanax mexicanus | 21.89 | 5e-06 | 53.1 |