LLPS-Mum-4472
Mterf3
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Transcription termination factor 3, mitochondrial; Mitochondrial transcription termination factor 3; mTERF3; mTERF domain-containing protein 1, mitochondrial |
Gene Name: | Mterf3, Mterfd1, CGI-12 |
Ensembl Gene: | ENSMUSG00000021519.11 |
Ensembl Protein: | ENSMUSP00000133433.1 |
Organism: | Mus musculus |
Taxa ID: | 10090 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Mitochondrial RNA granule | Predicted from orthologs | (View) |
▼ FUNCTION
Binds promoter DNA and regulates initiation of transcription (By similarity). Required for normal mitochondrial transcription and translation, and for normal assembly of mitochondrial respiratory complexes (PubMed:17662942, PubMed:23300484). Required for normal mitochondrial function (PubMed:17662942, PubMed:23300484). Maintains 16S rRNA levels and functions in mitochondrial ribosome assembly by regulating the biogenesis of the 39S ribosomal subunit (PubMed:17662942, PubMed:23300484). |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSMUST00000172597.7 | ENSMUSP00000133433.1 |
Ensembl | ENSMUST00000173407.7 | ENSMUSP00000133594.1 |
Ensembl | ENSMUST00000173158.7 | ENSMUSP00000134032.1 |
Ensembl | ENSMUST00000174339.1 | ENSMUSP00000134286.1 |
Ensembl | ENSMUST00000224085.1 | ENSMUSP00000152951.1 |
Ensembl | ENSMUST00000173773.1 | ENSMUSP00000133596.1 |
Ensembl | ENSMUST00000173891.7 | ENSMUSP00000133330.1 |
Ensembl | ENSMUST00000021991.10 | ENSMUSP00000021991.4 |
Ensembl | ENSMUST00000173910.1 | ENSMUSP00000133456.1 |
UniProt | Q8R3J4, MTEF3_MOUSE, Q9CSV1, Q9CWM7 | |
GeneBank | BC025173, BC085282, AK010525, AK011934 | BAB27006.1, AAH25173.1, BAB27924.3, AAH85282.1 |
RefSeq | NM_025547.3, XM_006517321.2, XM_011244548.2, XM_017315563.1 | NP_079823.2, XP_006517384.1, XP_011242850.1, XP_017171052.1 |
Entrez | 66410 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MALLAQQLPR RFNSVKLTSF IKAKQVTKRS ARAGKAVLPG FSAQPLLSSD TSFLRRGIKT 60 61 YRTLFWNRFH SASTNRTKSS AESTLLPSVA EQQERILSLE SELPLEEVDD LPPLSPLQSV 120 121 SEEEAIQIAA YSPLPISSFT LADYVDHSKT LQKLVQLGVD LSKIEKHPDA ANLLLRLDFE 180 181 KHIKQILLFL KDLGLEDNQL GPFLTKNYAI FSEDLENLKT RVAYLQSKNF SKTDIARMVK 240 241 NAPFLLSFSV ERLDNRLGFF QKELELNVKK TRDLVVRLPR LLTGSLEPVK ENMKVYHLEL 300 301 GFKHNEIQHM VIKIPKMLTA NKRKLTEIFD YVHNVMNIPH HIIVKFPQLF NTRVFKIKER 360 361 HLFLAYLGRA QYDPAKPNYV SLDKFVSFPD KIFCKEIAKA SLNDFEKFLK TL 412 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTCTGT TAGCCCAACA GTTACCCAGA CGGTTCAACT CAGTTAAGTT GACTAGCTTC 60 61 ATTAAAGCCA AACAAGTCAC CAAACGCTCT GCAAGAGCAG GAAAAGCCGT GTTGCCCGGC 120 121 TTCTCAGCTC AGCCTCTGCT CTCCTCTGAC ACGAGCTTTC TCCGGCGGGG AATTAAGACT 180 181 TACAGGACTT TGTTCTGGAA TCGTTTCCAT TCTGCCAGCA CAAATAGGAC AAAGAGTTCT 240 241 GCCGAAAGCA CTCTGCTTCC TTCAGTGGCT GAACAGCAGG AGAGGATACT TAGTCTTGAA 300 301 TCAGAGCTGC CTCTTGAAGA AGTGGATGAC CTGCCTCCAT TGTCTCCGTT ACAGTCAGTT 360 361 TCAGAGGAGG AGGCTATTCA GATTGCTGCG TACTCTCCGC TGCCCATCTC CTCCTTCACA 420 421 CTTGCAGATT ACGTAGACCA TTCCAAGACT CTGCAGAAGC TAGTGCAGCT TGGAGTGGAT 480 481 TTGTCTAAGA TAGAAAAACA TCCAGATGCA GCCAACCTCC TTCTAAGGCT GGATTTTGAA 540 541 AAGCACATTA AGCAAATACT GCTATTTCTT AAAGATTTGG GTTTAGAAGA TAACCAGCTG 600 601 GGACCATTTC TGACAAAAAA TTATGCTATT TTCTCTGAAG ACCTTGAAAA CCTTAAGACC 660 661 AGAGTAGCTT ATCTACAGTC AAAAAATTTC AGTAAGACAG ACATTGCACG GATGGTCAAA 720 721 AATGCACCAT TTCTGTTGAG CTTCTCCGTG GAAAGACTAG ATAACAGACT GGGATTTTTT 780 781 CAGAAAGAAC TTGAACTGAA TGTGAAGAAG ACTAGAGATC TGGTTGTTCG CCTTCCAAGG 840 841 CTACTAACAG GAAGTCTGGA GCCTGTGAAG GAAAACATGA AGGTTTATCA TCTTGAACTT 900 901 GGTTTTAAAC ATAATGAAAT TCAACATATG GTCATCAAGA TTCCTAAGAT GCTAACTGCA 960 961 AACAAAAGAA AACTTACAGA GATTTTTGAT TATGTACACA ATGTGATGAA TATTCCCCAC 1020 1021 CACATCATCG TCAAGTTTCC ACAGTTATTT AACACAAGAG TGTTTAAAAT TAAAGAAAGA 1080 1081 CACTTGTTTC TTGCCTACCT GGGAAGAGCA CAGTATGACC CAGCAAAACC TAACTATGTT 1140 1141 TCTTTGGACA AGTTCGTATC TTTTCCTGAT AAAATATTTT GTAAAGAGAT TGCCAAAGCT 1200 1201 TCACTAAATG ATTTTGAGAA ATTCTTAAAA ACGCTTTAG 1239 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Mitochondrion | |
Cellular Component | Nucleoplasm | |
Molecular Function | Double-stranded DNA binding | |
Molecular Function | Transcription regulatory region DNA binding | |
Biological Process | Mitochondrial ribosome assembly | |
Biological Process | Mitochondrial transcription | |
Biological Process | Mitochondrial translation | |
Biological Process | Negative regulation of transcription, DNA-templated |
▼ ANNOTATION
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
ENPD |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | GXD | TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Ran-0877 | Rattus norvegicus | 87.65 | 0.0 | 672 |
LLPS-Mea-2618 | Mesocricetus auratus | 79.47 | 0.0 | 622 |
LLPS-Ict-2723 | Ictidomys tridecemlineatus | 78.42 | 0.0 | 611 |
LLPS-Cap-4432 | Cavia porcellus | 78.42 | 0.0 | 610 |
LLPS-Aim-3574 | Ailuropoda melanoleuca | 78.02 | 0.0 | 622 |
LLPS-Fec-2324 | Felis catus | 77.94 | 0.0 | 609 |
LLPS-Eqc-3817 | Equus caballus | 77.94 | 0.0 | 613 |
LLPS-Fud-2384 | Fukomys damarensis | 77.94 | 0.0 | 612 |
LLPS-Urm-1299 | Ursus maritimus | 77.78 | 0.0 | 618 |
LLPS-Tut-1824 | Tursiops truncatus | 77.78 | 0.0 | 601 |
LLPS-Caf-2892 | Canis familiaris | 77.7 | 0.0 | 611 |
LLPS-Caj-4438 | Callithrix jacchus | 77.7 | 0.0 | 614 |
LLPS-Aon-1042 | Aotus nancymaae | 77.22 | 0.0 | 607 |
LLPS-Mup-3968 | Mustela putorius furo | 77.22 | 0.0 | 606 |
LLPS-Otg-4324 | Otolemur garnettii | 76.26 | 0.0 | 607 |
LLPS-Pap-3558 | Pan paniscus | 76.02 | 0.0 | 595 |
LLPS-Pat-3984 | Pan troglodytes | 76.02 | 0.0 | 595 |
LLPS-Hos-2460 | Homo sapiens | 76.02 | 0.0 | 595 |
LLPS-Cas-1727 | Carlito syrichta | 76.02 | 0.0 | 600 |
LLPS-Nol-4624 | Nomascus leucogenys | 76.02 | 0.0 | 594 |
LLPS-Loa-4046 | Loxodonta africana | 75.85 | 0.0 | 600 |
LLPS-Orc-1128 | Oryctolagus cuniculus | 75.78 | 0.0 | 591 |
LLPS-Gog-3967 | Gorilla gorilla | 75.78 | 0.0 | 595 |
LLPS-Dio-3420 | Dipodomys ordii | 75.36 | 0.0 | 589 |
LLPS-Man-3818 | Macaca nemestrina | 75.3 | 0.0 | 585 |
LLPS-Mam-0923 | Macaca mulatta | 75.3 | 0.0 | 585 |
LLPS-Maf-2888 | Macaca fascicularis | 75.3 | 0.0 | 585 |
LLPS-Chs-2187 | Chlorocebus sabaeus | 75.3 | 0.0 | 583 |
LLPS-Poa-4606 | Pongo abelii | 75.06 | 0.0 | 590 |
LLPS-Paa-3976 | Papio anubis | 75.06 | 0.0 | 584 |
LLPS-Mal-3224 | Mandrillus leucophaeus | 75.06 | 0.0 | 582 |
LLPS-Rhb-4498 | Rhinopithecus bieti | 74.7 | 0.0 | 579 |
LLPS-Cea-4497 | Cercocebus atys | 74.58 | 0.0 | 582 |
LLPS-Myl-4026 | Myotis lucifugus | 74.22 | 0.0 | 585 |
LLPS-Bot-3577 | Bos taurus | 73.86 | 0.0 | 586 |
LLPS-Ova-3703 | Ovis aries | 73.14 | 0.0 | 584 |
LLPS-Pes-0387 | Pelodiscus sinensis | 71.88 | 6e-100 | 303 |
LLPS-Sus-1142 | Sus scrofa | 71.88 | 0.0 | 588 |
LLPS-Fia-2756 | Ficedula albicollis | 66.89 | 3e-145 | 427 |
LLPS-Leo-3665 | Lepisosteus oculatus | 66.55 | 4e-140 | 410 |
LLPS-Tag-3040 | Taeniopygia guttata | 66.44 | 1e-144 | 421 |
LLPS-Mod-4037 | Monodelphis domestica | 66.17 | 7e-170 | 489 |
LLPS-Anc-1982 | Anolis carolinensis | 66.1 | 2e-139 | 416 |
LLPS-Sah-3373 | Sarcophilus harrisii | 65.38 | 3e-174 | 501 |
LLPS-Gaga-3774 | Gallus gallus | 64.41 | 1e-138 | 410 |
LLPS-Meg-1828 | Meleagris gallopavo | 62.18 | 2e-89 | 276 |
LLPS-Scf-4133 | Scleropages formosus | 62.03 | 5e-131 | 391 |
LLPS-Ora-1796 | Ornithorhynchus anatinus | 61.39 | 2e-161 | 468 |
LLPS-Anp-2540 | Anas platyrhynchos | 61.19 | 6e-147 | 431 |
LLPS-Dar-1934 | Danio rerio | 60.34 | 2e-126 | 378 |
LLPS-Gaa-1683 | Gasterosteus aculeatus | 59.04 | 4e-125 | 375 |
LLPS-Orn-1872 | Oreochromis niloticus | 58.98 | 5e-126 | 378 |
LLPS-Asm-1529 | Astyanax mexicanus | 58.98 | 1e-126 | 380 |
LLPS-Pof-0904 | Poecilia formosa | 58.64 | 9e-125 | 375 |
LLPS-Icp-0563 | Ictalurus punctatus | 58.64 | 9e-125 | 374 |
LLPS-Scm-2789 | Scophthalmus maximus | 58.36 | 2e-122 | 369 |
LLPS-Tar-1504 | Takifugu rubripes | 57.29 | 5e-116 | 352 |
LLPS-Ten-3387 | Tetraodon nigroviridis | 56.66 | 1e-121 | 362 |
LLPS-Xim-2957 | Xiphophorus maculatus | 56.27 | 1e-119 | 362 |
LLPS-Lac-3353 | Latimeria chalumnae | 55.02 | 8e-144 | 423 |
LLPS-Orl-3173 | Oryzias latipes | 54.58 | 1e-117 | 357 |
LLPS-Drm-1247 | Drosophila melanogaster | 41.3 | 1e-65 | 219 |
LLPS-Cis-1745 | Ciona savignyi | 30.98 | 2e-29 | 122 |
LLPS-Cae-1482 | Caenorhabditis elegans | 30.64 | 2e-42 | 159 |
LLPS-Cii-2221 | Ciona intestinalis | 29.76 | 5e-36 | 141 |
LLPS-Php-1532 | Physcomitrella patens | 28.46 | 6e-17 | 86.7 |
LLPS-Coc-1880 | Corchorus capsularis | 26.79 | 3e-09 | 62.8 |
LLPS-Gor-1726 | Gossypium raimondii | 26.49 | 7e-08 | 58.5 |
LLPS-Nia-1340 | Nicotiana attenuata | 26.45 | 2e-10 | 66.6 |
LLPS-Sol-1265 | Solanum lycopersicum | 26.45 | 3e-12 | 72.4 |
LLPS-Sot-1790 | Solanum tuberosum | 26.45 | 2e-12 | 71.6 |
LLPS-Mae-1987 | Manihot esculenta | 26.09 | 7e-10 | 64.7 |
LLPS-Hea-0969 | Helianthus annuus | 25.93 | 6e-10 | 64.7 |
LLPS-Vir-1689 | Vigna radiata | 25.57 | 1e-07 | 57.8 |
LLPS-Thc-0627 | Theobroma cacao | 25.5 | 3e-08 | 59.7 |
LLPS-Lep-0166 | Leersia perrieri | 25.45 | 9e-06 | 52.0 |
LLPS-Prp-1046 | Prunus persica | 25.36 | 1e-07 | 57.8 |
LLPS-Glm-0148 | Glycine max | 25.36 | 2e-09 | 63.5 |
LLPS-Cus-0861 | Cucumis sativus | 25.36 | 2e-07 | 57.4 |
LLPS-Arl-1868 | Arabidopsis lyrata | 25.36 | 3e-09 | 63.2 |
LLPS-Pot-2407 | Populus trichocarpa | 25.0 | 4e-07 | 56.2 |
LLPS-Art-2053 | Arabidopsis thaliana | 24.91 | 3e-09 | 62.8 |
LLPS-Met-0914 | Medicago truncatula | 24.68 | 1e-08 | 61.2 |
LLPS-Dac-1839 | Daucus carota | 24.46 | 1e-07 | 57.4 |
LLPS-Amt-2297 | Amborella trichopoda | 24.34 | 2e-08 | 60.5 |
LLPS-Phv-0618 | Phaseolus vulgaris | 23.26 | 7e-08 | 58.5 |