• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Brr-2452

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Ribulose bisphosphate carboxylase small chain
Ensembl Gene: Bra034029
Ensembl Protein: Bra034029.1-P
Organism: Brassica rapa
Taxa ID: 51351
LLPS Type: Scaffold


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Pyrenoid matrixPredicted from orthologs(View)

▼ FUNCTION

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblBra034029.1Bra034029.1-P
UniProtM4EYY6, M4EYY6_BRARP

▼ SEQUENCE

Protein Sequence (FASTA)
1     MASVMLSSAT  MASSPAHATM  VAPFIGLKSS  AAFPVTCKAN  TKVTSITSNG  GRVNCMKVWP  60
61    PVGKKKFETL  SYLPDLTDVE  IAKEVDYLIR  NKWTPCIEFE  LEHGFVYREH  GNIPGYYDGR  120
121   YWTMWKLPLF  GCTDSAQVLK  EVQECKKEYP  NAFIRIIGFD  NNRQAQCISF  IAYKPPSFTD  180
181   A  181
Nucleotide CDS Sequence (FASTA)
1     ATGGCTTCCG  TTATGCTCTC  TTCCGCTACA  ATGGCCTCTT  CTCCGGCTCA  TGCCACAATG  60
61    GTCGCACCAT  TCATCGGACT  TAAGTCCTCT  GCTGCTTTCC  CAGTGACATG  TAAGGCGAAC  120
121   ACCAAAGTTA  CTTCCATCAC  AAGCAACGGC  GGAAGAGTTA  ACTGCATGAA  GGTGTGGCCT  180
181   CCAGTTGGCA  AGAAGAAGTT  TGAGACTCTC  TCTTACCTTC  CTGACCTTAC  CGATGTCGAA  240
241   ATAGCCAAGG  AAGTTGACTA  CCTTATCCGC  AACAAGTGGA  CTCCATGTAT  TGAATTCGAG  300
301   TTGGAGCACG  GTTTTGTATA  CCGTGAGCAT  GGAAACATCC  CTGGATACTA  TGATGGACGA  360
361   TACTGGACAA  TGTGGAAGCT  TCCTTTGTTC  GGATGCACTG  ACTCAGCTCA  GGTGTTGAAG  420
421   GAAGTGCAAG  AATGCAAAAA  GGAGTACCCC  AACGCCTTCA  TTAGGATCAT  CGGATTCGAC  480
481   AACAATCGTC  AAGCCCAGTG  CATCAGTTTC  ATCGCCTACA  AGCCACCAAG  CTTCACTGAT  540
541   GCTTAA  546

▼ KEYWORD

ID
Family
Carbon dioxide fixation
Chloroplast
Complete proteome
Lyase
Monooxygenase
Oxidoreductase
Photorespiration
Photosynthesis
Plastid
Reference proteome

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Chloroplast
Molecular Function
Monooxygenase activity
Molecular Function
Ribulose-bisphosphate carboxylase activity
Biological Process
Carbon fixation
Biological Process
Photorespiration
Biological Process
Photosynthesis

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Bro-2912Brassica oleracea95.032e-129 368
LLPS-Brn-1270Brassica napus93.924e-128 365
LLPS-Art-0746Arabidopsis thaliana88.833e-119 342
LLPS-Arl-1207Arabidopsis lyrata88.42e-121 348
LLPS-Coc-2020Corchorus capsularis75.964e-104 304
LLPS-Hea-0953Helianthus annuus74.449e-95 280
LLPS-Mua-1283Musa acuminata71.154e-81 244
LLPS-Pot-0793Populus trichocarpa70.792e-93 276
LLPS-Nia-2455Nicotiana attenuata69.752e-86 259
LLPS-Met-2380Medicago truncatula69.16e-90 268
LLPS-Sol-2231Solanum lycopersicum68.263e-85 256
LLPS-Phv-1315Phaseolus vulgaris67.45e-87 260
LLPS-Sot-0687Solanum tuberosum66.852e-89 266
LLPS-Via-0886Vigna angularis65.191e-81 247
LLPS-Hov-1518Hordeum vulgare64.332e-77 235
LLPS-Orp-0772Oryza punctata63.749e-77 234
LLPS-Ors-0034Oryza sativa63.162e-75 230
LLPS-Orni-1621Oryza nivara63.162e-75 230
LLPS-Org-1410Oryza glaberrima62.799e-75 229
LLPS-Orm-0716Oryza meridionalis62.794e-75 230
LLPS-Ori-1356Oryza indica62.794e-75 230
LLPS-Lep-2313Leersia perrieri62.793e-75 230
LLPS-Tra-2983Triticum aestivum62.641e-77 237
LLPS-Orr-1900Oryza rufipogon62.218e-74 226
LLPS-Brd-1131Brachypodium distachyon62.151e-77 236
LLPS-Orbr-0976Oryza brachyantha61.993e-75 230
LLPS-Tru-2017Triticum urartu61.993e-76 233
LLPS-Orb-2333Oryza barthii61.631e-73 226
LLPS-Orgl-1204Oryza glumaepatula61.631e-73 226
LLPS-Sob-1698Sorghum bicolor61.182e-73 225
LLPS-Sei-1659Setaria italica61.083e-72 223
LLPS-Zem-1826Zea mays60.473e-71 220
LLPS-Amt-1788Amborella trichopoda60.167e-59 188
LLPS-Viv-1490Vitis vinifera59.694e-58 186
LLPS-Gor-2752Gossypium raimondii58.173e-63 199
LLPS-Thc-1788Theobroma cacao54.91e-57 187
LLPS-Glm-0988Glycine max52.911e-59 190
LLPS-Sem-1041Selaginella moellendorffii52.232e-56 182
LLPS-Mae-0476Manihot esculenta50.03e-58 186
LLPS-Vir-1805Vigna radiata50.03e-55 178
LLPS-Php-1165Physcomitrella patens48.63e-56 182
LLPS-Osl-1282Ostreococcus lucimarinus46.287e-37 130
LLPS-Chr-0000Chlamydomonas reinhardtii40.344e-43 148
LLPS-Chc-0644Chondrus crispus37.963e-1676.3
LLPS-Cym-0943Cyanidioschyzon merolae34.861e-1780.5