LLPS-Bro-2912
106325660
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Ribulose bisphosphate carboxylase small chain |
| Gene Name: | 106325660 |
| Ensembl Gene: | Bo2g055360 |
| Ensembl Protein: | Bo2g055360.1 |
| Organism: | Brassica oleracea |
| Taxa ID: | 109376 |
| LLPS Type: | Scaffold |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Pyrenoid matrix | Predicted from orthologs | (View) |
▼ FUNCTION
| RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Bo2g055360.1 | Bo2g055360.1 |
| UniProt | A0A0D3ANI1, A0A0D3ANI1_BRAOL | |
| RefSeq | XM_013763724.1 | XP_013619178.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MASVMLSSAT MTSSLAHSTM VAPFIGLKSS AAFPMTCKAN TEITSITSNG GRVNCMKVWP 60 61 PVGKKKFETL SYLPDLTDVE IAKEVDYLIR NKWTPCIEFE LEHGFVYREH GNIPGYYDGR 120 121 YWTMWKLPLF GCTDPAQVLK EVEECKQEYP NAFIRIIGFD NNRQAQCISF IAYKPPSFTD 180 181 A 181 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTTCCG TTATGCTCTC TTCCGCTACA ATGACCTCTT CTCTGGCTCA TTCCACAATG 60 61 GTCGCACCAT TCATCGGACT TAAGTCCTCT GCTGCTTTCC CAATGACATG TAAGGCCAAC 120 121 ACCGAAATTA CTTCCATCAC AAGCAATGGC GGAAGAGTTA ATTGCATGAA GGTGTGGCCT 180 181 CCTGTTGGCA AGAAGAAGTT TGAGACTCTA TCTTACCTTC CTGACCTTAC CGATGTCGAA 240 241 ATAGCCAAGG AAGTTGACTA CCTTATCCGC AACAAGTGGA CTCCATGTAT TGAATTCGAG 300 301 TTGGAGCACG GTTTTGTATA CCGTGAGCAT GGAAACATCC CTGGATACTA TGATGGACGA 360 361 TACTGGACAA TGTGGAAGCT TCCTTTGTTC GGATGCACTG ACCCAGCTCA GGTGTTGAAG 420 421 GAAGTGGAAG AATGCAAACA GGAGTACCCC AATGCCTTCA TTAGGATCAT CGGATTCGAC 480 481 AACAATCGTC AAGCCCAGTG CATCAGTTTC ATCGCCTACA AGCCACCAAG CTTCACTGAT 540 541 GCTTAA 546 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast | |
Molecular Function | Monooxygenase activity | |
Molecular Function | Ribulose-bisphosphate carboxylase activity | |
Biological Process | Carbon fixation | |
Biological Process | Photorespiration | |
Biological Process | Photosynthesis |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brn-1270 | Brassica napus | 97.24 | 2e-131 | 373 |
| LLPS-Brr-2452 | Brassica rapa | 95.03 | 2e-129 | 368 |
| LLPS-Art-0746 | Arabidopsis thaliana | 87.71 | 5e-117 | 336 |
| LLPS-Arl-0720 | Arabidopsis lyrata | 87.15 | 2e-116 | 335 |
| LLPS-Coc-2020 | Corchorus capsularis | 74.86 | 1e-101 | 298 |
| LLPS-Mua-1283 | Musa acuminata | 70.51 | 1e-80 | 243 |
| LLPS-Hea-0953 | Helianthus annuus | 70.22 | 1e-91 | 272 |
| LLPS-Pot-0793 | Populus trichocarpa | 69.66 | 6e-91 | 270 |
| LLPS-Met-2380 | Medicago truncatula | 69.27 | 4e-89 | 266 |
| LLPS-Nia-2455 | Nicotiana attenuata | 69.14 | 2e-85 | 256 |
| LLPS-Sot-0687 | Solanum tuberosum | 67.4 | 4e-89 | 266 |
| LLPS-Phv-1315 | Phaseolus vulgaris | 66.85 | 2e-86 | 259 |
| LLPS-Sol-2231 | Solanum lycopersicum | 66.47 | 7e-84 | 252 |
| LLPS-Via-0886 | Vigna angularis | 64.64 | 2e-81 | 246 |
| LLPS-Orp-0772 | Oryza punctata | 63.58 | 2e-74 | 228 |
| LLPS-Ors-0034 | Oryza sativa | 62.96 | 3e-73 | 225 |
| LLPS-Orm-0716 | Oryza meridionalis | 62.96 | 5e-73 | 224 |
| LLPS-Ori-1356 | Oryza indica | 62.96 | 5e-73 | 224 |
| LLPS-Orni-1621 | Oryza nivara | 62.96 | 3e-73 | 225 |
| LLPS-Hov-1518 | Hordeum vulgare | 62.57 | 1e-75 | 231 |
| LLPS-Brd-1131 | Brachypodium distachyon | 61.58 | 2e-76 | 233 |
| LLPS-Orr-1900 | Oryza rufipogon | 61.14 | 1e-71 | 221 |
| LLPS-Orb-2333 | Oryza barthii | 61.14 | 8e-72 | 221 |
| LLPS-Orgl-1204 | Oryza glumaepatula | 61.14 | 8e-72 | 221 |
| LLPS-Org-1410 | Oryza glaberrima | 61.05 | 1e-72 | 223 |
| LLPS-Lep-2313 | Leersia perrieri | 61.05 | 3e-73 | 225 |
| LLPS-Mae-0476 | Manihot esculenta | 60.94 | 2e-57 | 185 |
| LLPS-Orbr-0976 | Oryza brachyantha | 60.92 | 2e-73 | 225 |
| LLPS-Tra-2983 | Triticum aestivum | 60.92 | 1e-75 | 232 |
| LLPS-Tru-2017 | Triticum urartu | 60.82 | 2e-74 | 228 |
| LLPS-Sob-1698 | Sorghum bicolor | 60.62 | 3e-71 | 219 |
| LLPS-Amt-1788 | Amborella trichopoda | 60.16 | 2e-58 | 187 |
| LLPS-Sei-1659 | Setaria italica | 59.28 | 3e-70 | 217 |
| LLPS-Zem-1826 | Zea mays | 57.56 | 2e-68 | 213 |
| LLPS-Viv-1490 | Vitis vinifera | 52.94 | 3e-57 | 184 |
| LLPS-Sem-1041 | Selaginella moellendorffii | 52.87 | 6e-58 | 185 |
| LLPS-Gor-2752 | Gossypium raimondii | 52.63 | 1e-61 | 195 |
| LLPS-Glm-0988 | Glycine max | 50.87 | 1e-58 | 187 |
| LLPS-Vir-1805 | Vigna radiata | 50.0 | 3e-55 | 178 |
| LLPS-Php-1165 | Physcomitrella patens | 49.69 | 5e-54 | 176 |
| LLPS-Thc-1788 | Theobroma cacao | 49.14 | 2e-56 | 184 |
| LLPS-Osl-1282 | Ostreococcus lucimarinus | 46.28 | 2e-37 | 132 |
| LLPS-Chr-0000 | Chlamydomonas reinhardtii | 40.91 | 3e-45 | 154 |
| LLPS-Chc-0644 | Chondrus crispus | 37.04 | 3e-15 | 73.6 |
| LLPS-Cym-0943 | Cyanidioschyzon merolae | 33.94 | 8e-18 | 80.9 |