• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Brn-2321
BnaCnng17010D

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Serine hydroxymethyltransferase
Gene Name: BnaCnng17010D, GSBRNA2T00092583001
Ensembl Gene: GSBRNA2T00103180001
Ensembl Protein: CDX72795
Organism: Brassica napus
Taxa ID: 3708
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ FUNCTION


Interconversion of serine and glycine.

▼ CROSS REFERENCE


DatabaseNucleotide IDProtein ID
EnsemblCDX72795CDX72795
UniProtA0A078IGW6, A0A078IGW6_BRANA
GeneBankLK032818CDY49212.1
RefSeqXM_013842453.1XP_013697907.1

▼ SEQUENCE


Protein Sequence (FASTA)
1     MALALRRLSS  SLKKPIFSNG  VSLRSMSSLP  TSAMADSERS  RSSWIKQLNA  PLEEIDPEIA  60
61    DIIELEKARQ  WKGFELIPSE  NFTSASVMEA  VGSVMTNKYS  EGYPGARYYG  GNEYIDMAES  120
121   LCQKRALEAF  HLDPSKWGVN  VQSLSGSPAN  FQVYTALLKP  HERIMALDLP  HGGHLSHGYQ  180
181   TDTKKISAVS  IFFETMPYRL  DESTGYIDYD  QLEKSAVLFR  PKLIVAGASA  YARLYDYARI  240
241   RKVCDKQKAV  MLADMAHISG  LVAAGVIPSP  FEYADVVTTT  THKSLRGPRG  AMIFFRKGLK  300
301   EVNKQGKEVM  YDYEDRINAA  VFPGLQGGPH  NHTITGLAVA  LKQVKSPEYK  AYQDQVLRNC  360
361   SKFAEVRCLS  KLVDIPQVSC  HTLLSKGYDL  VSGGTDNHLV  LVNLKNKGID  GSRVEKVLES  420
421   VHIAANKNTV  PGDVSAMVPG  GIRMGTPALT  SRGFIEEDFA  KVAEYFDLAV  KIALKIKAES  480
481   QGTKLKDFVA  TMQSNEKLQS  EMAKLREMIE  EYAKQFPTIG  FEKETMRYKE  530
Nucleotide CDS Sequence (FASTA)
1     ATGGCGTTGG  CTCTTCGCAG  ACTATCATCT  TCCCTTAAGA  AGCCCATCTT  CTCAAATGGC  60
61    GTTTCCCTCC  GTTCCATGTC  GTCTTTGCCA  ACCTCGGCTA  TGGCGGACTC  GGAGAGATCT  120
121   CGTTCCAGTT  GGATAAAGCA  ACTGAATGCA  CCTCTGGAAG  AAATCGATCC  AGAAATCGCA  180
181   GATATTATCG  AACTCGAGAA  GGCTCGTCAA  TGGAAGGGAT  TTGAACTTAT  ACCGTCGGAG  240
241   AATTTCACAT  CTGCCTCGGT  GATGGAAGCT  GTTGGCTCTG  TTATGACTAA  CAAGTATAGT  300
301   GAAGGCTACC  CTGGAGCTAG  ATACTATGGA  GGCAATGAGT  ACATTGACAT  GGCTGAGTCA  360
361   TTATGTCAAA  AACGCGCCCT  CGAAGCTTTT  CACTTAGATC  CTTCCAAATG  GGGAGTCAAT  420
421   GTGCAGTCTT  TATCAGGATC  ACCAGCTAAC  TTCCAAGTTT  ACACCGCGCT  ACTTAAACCT  480
481   CATGAAAGAA  TCATGGCTCT  TGACTTACCT  CATGGTGGCC  ATCTTTCTCA  TGGTTATCAG  540
541   ACTGACACAA  AGAAAATATC  TGCTGTATCC  ATCTTCTTTG  AGACAATGCC  ATACAGATTA  600
601   GATGAGAGCA  CTGGTTACAT  TGATTACGAT  CAGCTAGAAA  AAAGTGCGGT  GCTTTTCAGA  660
661   CCCAAACTTA  TTGTTGCGGG  TGCAAGTGCT  TATGCTCGTT  TATATGACTA  TGCACGTATC  720
721   CGTAAGGTCT  GTGACAAGCA  AAAGGCGGTT  ATGCTGGCAG  ATATGGCTCA  CATTAGTGGG  780
781   TTGGTTGCGG  CTGGTGTTAT  TCCTTCTCCT  TTTGAGTATG  CTGATGTTGT  TACGACTACA  840
841   ACTCACAAAT  CTCTTCGAGG  TCCCAGAGGG  GCTATGATAT  TCTTTAGGAA  GGGATTGAAA  900
901   GAGGTTAACA  AACAAGGAAA  AGAGGTCATG  TATGACTATG  AGGACAGAAT  CAATGCAGCT  960
961   GTTTTTCCTG  GACTGCAAGG  TGGTCCACAT  AATCATACTA  TAACAGGTCT  AGCAGTTGCT  1020
1021  CTGAAGCAGG  TGAAATCACC  AGAGTATAAG  GCTTATCAGG  ATCAAGTTCT  CCGCAATTGC  1080
1081  TCAAAGTTTG  CTGAGGTGAG  ATGTTTGAGT  AAATTAGTTG  ATATACCTCA  AGTATCCTGC  1140
1141  CATACTTTGC  TATCAAAAGG  ATATGACTTA  GTATCTGGAG  GCACTGACAA  TCATTTAGTC  1200
1201  TTGGTGAACT  TGAAAAATAA  GGGAATAGAT  GGATCAAGAG  TGGAAAAAGT  ATTAGAATCA  1260
1261  GTACATATTG  CAGCAAACAA  GAACACTGTT  CCTGGTGATG  TTTCCGCCAT  GGTTCCAGGC  1320
1321  GGCATCCGTA  TGGGAACACC  AGCTCTCACA  TCAAGAGGAT  TCATTGAAGA  AGATTTTGCA  1380
1381  AAAGTGGCTG  AATACTTTGA  TTTAGCCGTC  AAGATAGCCT  TGAAGATCAA  GGCAGAGTCT  1440
1441  CAAGGAACAA  AGCTGAAGGA  CTTTGTAGCA  ACGATGCAAT  CAAATGAGAA  GTTACAGTCA  1500
1501  GAGATGGCAA  AGCTTCGTGA  GATGATTGAA  GAATACGCTA  AACAGTTCCC  AACGATTGGG  1560
1561  TTCGAGAAAG  AGACAATGCG  ATACAAAGAG  TAG  1593

▼ KEYWORD


ID
Family
Coiled coil
Complete proteome
One-carbon metabolism
Pyridoxal phosphate
Reference proteome
Transferase

▼ GENE ONTOLOGY


ID
Classification
Description
Molecular Function
Glycine hydroxymethyltransferase activity
Molecular Function
Pyridoxal phosphate binding
Biological Process
Glycine biosynthetic process from serine
Biological Process
Tetrahydrofolate interconversion

▼ KEGG



▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Bro-2722Brassica oleracea96.330.0 991
LLPS-Brr-1379Brassica rapa93.950.0 969
LLPS-Art-1809Arabidopsis thaliana91.750.0 959
LLPS-Arl-2453Arabidopsis lyrata91.750.0 953
LLPS-Nia-2398Nicotiana attenuata84.360.0 869
LLPS-Thc-0212Theobroma cacao84.330.0 863
LLPS-Viv-0937Vitis vinifera84.170.0 876
LLPS-Coc-1068Corchorus capsularis84.140.0 847
LLPS-Gor-0776Gossypium raimondii83.950.0 855
LLPS-Cus-1961Cucumis sativus83.950.0 866
LLPS-Pot-1901Populus trichocarpa83.730.0 855
LLPS-Dac-0425Daucus carota83.560.0 861
LLPS-Hea-2602Helianthus annuus83.560.0 852
LLPS-Prp-1906Prunus persica83.460.0 875
LLPS-Mae-1119Manihot esculenta83.140.0 859
LLPS-Mua-2113Musa acuminata83.10.0 849
LLPS-Sot-0061Solanum tuberosum83.010.0 861
LLPS-Met-0857Medicago truncatula82.980.0 859
LLPS-Phv-0465Phaseolus vulgaris82.630.0 846
LLPS-Sol-0670Solanum lycopersicum82.240.0 857
LLPS-Glm-2860Glycine max81.980.0 842
LLPS-Via-0418Vigna angularis79.440.0 845
LLPS-Sem-0783Selaginella moellendorffii78.050.0 783
LLPS-Php-0058Physcomitrella patens75.980.0 787
LLPS-Tru-1178Triticum urartu75.10.0 732
LLPS-Osl-0955Ostreococcus lucimarinus70.470.0 678
LLPS-Chr-1685Chlamydomonas reinhardtii68.280.0 675
LLPS-Orm-0355Oryza meridionalis67.850.0 638
LLPS-Abg-1072Absidia glauca65.50.0 585
LLPS-Pyt-1337Pyrenophora teres65.020.0 552
LLPS-Trv-0734Trichoderma virens62.550.0 577
LLPS-Fus-0988Fusarium solani62.340.0 590
LLPS-Fuo-1485Fusarium oxysporum62.340.0 589
LLPS-Fuv-0779Fusarium verticillioides62.340.0 588
LLPS-Blg-1491Blumeria graminis62.170.0 549
LLPS-Ast-1349Aspergillus terreus62.060.0 564
LLPS-Caf-0064Canis familiaris61.940.0 551
LLPS-Coo-1539Colletotrichum orbiculare61.820.0 585
LLPS-Asni-0523Aspergillus niger61.740.0 573
LLPS-Mao-1124Magnaporthe oryzae61.690.0 578
LLPS-Cog-1376Colletotrichum gloeosporioides61.610.0 579
LLPS-Zyt-0219Zymoseptoria tritici61.510.0 567
LLPS-Trr-0783Trichoderma reesei61.310.0 570
LLPS-Beb-0930Beauveria bassiana61.260.0 577
LLPS-Cogr-1322Colletotrichum graminicola61.170.0 582
LLPS-Scp-1241Schizosaccharomyces pombe61.150.0 572
LLPS-Kop-1003Komagataella pastoris61.010.0 585
LLPS-Leo-0252Lepisosteus oculatus60.960.0 584
LLPS-Gaa-1164Gasterosteus aculeatus60.880.0 578
LLPS-Asn-1265Aspergillus nidulans60.870.0 574
LLPS-Aso-1178Aspergillus oryzae60.870.0 565
LLPS-Asf-0455Aspergillus flavus60.870.0 564
LLPS-Orn-2875Oreochromis niloticus60.860.0 566
LLPS-Scm-2054Scophthalmus maximus60.660.0 579
LLPS-Xim-1691Xiphophorus maculatus60.660.0 578
LLPS-Dos-0925Dothistroma septosporum60.480.0 558
LLPS-Lem-1072Leptosphaeria maculans60.480.0 565
LLPS-Pof-2570Poecilia formosa60.440.0 580
LLPS-Nef-0921Neosartorya fischeri60.430.0 564
LLPS-Phn-1551Phaeosphaeria nodorum60.430.0 556
LLPS-Asfu-1415Aspergillus fumigatus60.430.0 567
LLPS-Lac-1839Latimeria chalumnae60.390.0 589
LLPS-Nec-0140Neurospora crassa60.390.0 587
LLPS-Myl-2997Myotis lucifugus60.260.0 579
LLPS-Ten-0914Tetraodon nigroviridis60.220.0 575
LLPS-Vir-0976Vigna radiata60.220.0 558
LLPS-Loa-0219Loxodonta africana60.040.0 579
LLPS-Dio-3021Dipodomys ordii60.040.0 581
LLPS-Cym-0095Cyanidioschyzon merolae59.960.0 579
LLPS-Pat-0610Pan troglodytes59.830.0 575
LLPS-Pap-3850Pan paniscus59.830.0 575
LLPS-Rhb-2692Rhinopithecus bieti59.830.0 577
LLPS-Eqc-3485Equus caballus59.830.0 577
LLPS-Anc-2771Anolis carolinensis59.830.0 577
LLPS-Aon-2076Aotus nancymaae59.830.0 575
LLPS-Caj-4755Callithrix jacchus59.830.0 573
LLPS-Gog-2559Gorilla gorilla59.830.0 576
LLPS-Bot-2589Bos taurus59.740.0 577
LLPS-Xet-3438Xenopus tropicalis59.690.0 575
LLPS-Scc-1511Schizosaccharomyces cryophilus59.650.0 556
LLPS-Man-4703Macaca nemestrina59.610.0 575
LLPS-Fec-3953Felis catus59.610.0 573
LLPS-Hos-0008Homo sapiens59.610.0 575
LLPS-Cap-2472Cavia porcellus59.610.0 576
LLPS-Poa-3846Pongo abelii59.610.0 573
LLPS-Cea-1768Cercocebus atys59.610.0 575
LLPS-Mea-0700Mesocricetus auratus59.610.0 574
LLPS-Maf-4287Macaca fascicularis59.610.0 575
LLPS-Mum-3405Mus musculus59.610.0 575
LLPS-Mal-4235Mandrillus leucophaeus59.610.0 574
LLPS-Paa-3552Papio anubis59.610.0 575
LLPS-Scf-2491Scleropages formosus59.560.0 574
LLPS-Tar-2590Takifugu rubripes59.560.0 570
LLPS-Yal-0033Yarrowia lipolytica59.420.0 543
LLPS-Urm-1529Ursus maritimus59.390.0 573
LLPS-Ict-4352Ictidomys tridecemlineatus59.390.0 577
LLPS-Chs-2450Chlorocebus sabaeus59.390.0 572
LLPS-Fud-2617Fukomys damarensis59.390.0 573
LLPS-Aim-3168Ailuropoda melanoleuca59.390.0 573
LLPS-Mup-3762Mustela putorius furo59.390.0 570
LLPS-Ran-3826Rattus norvegicus59.390.0 573
LLPS-Dar-1628Danio rerio59.340.0 566
LLPS-Ved-0846Verticillium dahliae59.340.0 556
LLPS-Asm-1638Astyanax mexicanus59.340.0 568
LLPS-Cii-1692Ciona intestinalis59.30.0 574
LLPS-Cae-0855Caenorhabditis elegans59.210.0 568
LLPS-Scj-1324Schizosaccharomyces japonicus59.160.0 560
LLPS-Map-1159Magnaporthe poae59.090.0 565
LLPS-Pytr-1510Pyrenophora triticirepentis59.070.0 538
LLPS-Gag-0749Gaeumannomyces graminis58.870.0 561
LLPS-Mod-0460Monodelphis domestica58.770.0 565
LLPS-Cas-1407Carlito syrichta58.730.0 561
LLPS-Sus-0009Sus scrofa58.520.0 546
LLPS-Ora-3550Ornithorhynchus anatinus58.460.0 558
LLPS-Icp-0434Ictalurus punctatus58.460.0 564
LLPS-Tag-2072Taeniopygia guttata58.420.0 565
LLPS-Orc-2507Oryctolagus cuniculus58.330.0 553
LLPS-Orl-1966Oryzias latipes58.330.0 571
LLPS-Otg-2294Otolemur garnettii58.30.0 567
LLPS-Mam-3670Macaca mulatta58.240.0 535
LLPS-Tut-0673Tursiops truncatus58.110.0 551
LLPS-Nol-1402Nomascus leucogenys58.080.0 548
LLPS-Fia-3442Ficedula albicollis57.990.0 560
LLPS-Pes-1713Pelodiscus sinensis57.730.0 555
LLPS-Cis-1282Ciona savignyi57.550.0 560
LLPS-Asc-0919Aspergillus clavatus57.530.0 568
LLPS-Ors-2075Oryza sativa57.080.0 529
LLPS-Meg-0026Meleagris gallopavo56.890.0 550
LLPS-Ova-2371Ovis aries56.460.0 532
LLPS-Asg-0172Ashbya gossypii56.40.0 541
LLPS-Gaga-1352Gallus gallus56.160.0 537