LLPS-Brn-1921
BnaA03g56950D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaA03g56950D protein |
| Gene Name: | BnaA03g56950D, GSBRNA2T00011654001 |
| Ensembl Gene: | GSBRNA2T00011654001 |
| Ensembl Protein: | CDY53893 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDY53893 | CDY53893 |
| UniProt | A0A078IY11, A0A078IY11_BRANA | |
| GeneBank | LK033247 | CDY53893.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MEHSKEDQAK SEDQKINKAQ DPNPRFASEG CSVLLDVNDG DRLVFARLSG GAIFKIGNTN 60 61 YSLKPLIGAP FGSLFQVETG EDGSFLSRIL PVKKESTSVN VVDDDARDNR ELIDDNESQN 120 121 LTCEEIEAMR REGAKGDEII EALIANSKTF DKKFQLSQEK YKLKKQKKYA PKVLLRRPFA 180 181 RSICEAYFKK YPARIGFIRV DALSLLLTMA NVTAYSDVLV VDMVGGLVTG AVAERLGGTG 240 241 YVCNTYKGDS PSSVDMVKMF NFTDKIRERI VHSSINELSS AKAASPEENN QVRDSSASDM 300 301 VEDVSVTAEA RVDDVAVRES KLTKAPQPGA KASKEAVEMW KENGFSSLIM AAQDQDPWTL 360 361 AKDVLPLLSY SAPFAIYHQY LQPLATCMHN LQQGKMAINL QITEPWLREY QVLPSRTHPH 420 421 MQMSSFGGYV LSGIRISTT 439 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGAGCACA GTAAGGAGGA TCAGGCTAAG TCGGAGGATC AGAAAATCAA TAAGGCACAA 60 61 GATCCAAATC CGAGATTTGC GAGCGAAGGT TGCAGCGTGT TGCTGGACGT GAACGATGGA 120 121 GACCGTCTCG TCTTCGCTCG TCTCTCCGGT GGCGCTATAT TTAAAATCGG GAATACGAAT 180 181 TACTCGTTGA AGCCATTGAT TGGAGCTCCG TTTGGATCTC TGTTCCAAGT CGAAACCGGA 240 241 GAAGATGGCT CTTTCCTCTC TCGCATTCTT CCCGTCAAAA AAGAAAGCAC CAGCGTTAAT 300 301 GTTGTAGACG ATGATGCTAG AGATAATAGG GAACTTATCG ACGATAATGA ATCTCAAAAC 360 361 CTCACTTGTG AAGAGATTGA AGCTATGCGG AGAGAGGGTG CAAAAGGAGA CGAGATTATT 420 421 GAAGCACTGA TTGCAAACAG TAAAACATTT GACAAGAAGT TTCAGTTGTC TCAGGAAAAA 480 481 TATAAGCTTA AGAAGCAGAA GAAGTATGCC CCAAAGGTGC TTCTAAGACG CCCTTTTGCT 540 541 CGAAGTATCT GTGAAGCTTA TTTCAAGAAA TATCCAGCCA GAATCGGATT CATACGTGTA 600 601 GATGCGTTAT CTCTTTTGTT AACGATGGCT AACGTCACCG CATACTCGGA TGTGCTAGTG 660 661 GTGGATATGG TGGGTGGCCT TGTCACTGGT GCAGTGGCTG AACGTTTAGG AGGCACTGGT 720 721 TATGTTTGTA ATACATATAA AGGGGATTCC CCTTCCTCTG TGGATATGGT TAAGATGTTC 780 781 AACTTTACCG ACAAGATTAG AGAGAGGATC GTGCATTCAT CTATAAACGA GCTCTCATCA 840 841 GCCAAAGCTG CATCTCCTGA AGAAAACAAT CAAGTAAGAG ACTCATCTGC ATCTGATATG 900 901 GTAGAAGATG TATCTGTGAC AGCTGAGGCT AGAGTAGATG ATGTTGCTGT ACGAGAGAGC 960 961 AAACTTACCA AGGCCCCACA ACCTGGAGCC AAAGCTTCTA AAGAAGCAGT AGAAATGTGG 1020 1021 AAAGAAAACG GTTTCTCTAG CTTAATCATG GCAGCACAAG ACCAAGACCC ATGGACTTTA 1080 1081 GCTAAAGATG TATTGCCACT GCTCTCCTAC TCTGCTCCCT TTGCAATATA TCATCAGTAC 1140 1141 TTACAGCCTC TGGCGACATG TATGCACAAC CTTCAGCAAG GGAAGATGGC CATCAATCTG 1200 1201 CAAATAACAG AACCATGGCT ACGCGAATAT CAGGTGCTTC CATCAAGAAC TCACCCTCAC 1260 1261 ATGCAGATGA GCTCTTTTGG AGGCTATGTC CTTAGCGGCA TCAGAATCTC CACCACTTGA 1320 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Brr-3011 | Brassica rapa | 98.41 | 0.0 | 788 |
| LLPS-Bro-0148 | Brassica oleracea | 94.53 | 0.0 | 753 |
| LLPS-Art-2121 | Arabidopsis thaliana | 81.11 | 0.0 | 637 |
| LLPS-Arl-0568 | Arabidopsis lyrata | 80.44 | 0.0 | 633 |
| LLPS-Orb-1565 | Oryza barthii | 74.47 | 8e-40 | 152 |
| LLPS-Ori-0189 | Oryza indica | 66.39 | 8e-48 | 177 |
| LLPS-Orni-0992 | Oryza nivara | 66.39 | 1e-47 | 177 |
| LLPS-Orgl-0612 | Oryza glumaepatula | 66.39 | 8e-48 | 177 |
| LLPS-Orr-1490 | Oryza rufipogon | 66.39 | 1e-47 | 177 |
| LLPS-Mae-0810 | Manihot esculenta | 64.29 | 5e-170 | 492 |
| LLPS-Thc-1292 | Theobroma cacao | 62.47 | 2e-165 | 481 |
| LLPS-Gor-0592 | Gossypium raimondii | 62.44 | 4e-162 | 473 |
| LLPS-Orm-0777 | Oryza meridionalis | 62.3 | 3e-69 | 234 |
| LLPS-Pot-0923 | Populus trichocarpa | 62.17 | 2e-157 | 460 |
| LLPS-Met-1383 | Medicago truncatula | 60.4 | 1e-152 | 448 |
| LLPS-Sol-2392 | Solanum lycopersicum | 60.23 | 8e-162 | 471 |
| LLPS-Glm-1797 | Glycine max | 59.91 | 1e-154 | 453 |
| LLPS-Sot-1349 | Solanum tuberosum | 59.86 | 2e-160 | 468 |
| LLPS-Prp-0631 | Prunus persica | 59.68 | 2e-152 | 447 |
| LLPS-Cus-1277 | Cucumis sativus | 59.63 | 3e-145 | 429 |
| LLPS-Nia-1561 | Nicotiana attenuata | 59.5 | 8e-159 | 464 |
| LLPS-Tru-0551 | Triticum urartu | 58.95 | 5e-116 | 352 |
| LLPS-Via-0317 | Vigna angularis | 58.81 | 3e-154 | 453 |
| LLPS-Viv-0124 | Vitis vinifera | 58.74 | 1e-156 | 459 |
| LLPS-Phv-0546 | Phaseolus vulgaris | 58.31 | 2e-152 | 448 |
| LLPS-Hea-2033 | Helianthus annuus | 57.99 | 3e-142 | 421 |
| LLPS-Dac-0829 | Daucus carota | 57.31 | 4e-142 | 420 |
| LLPS-Tra-2467 | Triticum aestivum | 55.95 | 3e-137 | 410 |
| LLPS-Brd-0696 | Brachypodium distachyon | 55.26 | 7e-124 | 374 |
| LLPS-Sei-0051 | Setaria italica | 54.7 | 7e-132 | 395 |
| LLPS-Lep-0458 | Leersia perrieri | 54.53 | 4e-132 | 397 |
| LLPS-Mua-1280 | Musa acuminata | 54.47 | 8e-138 | 413 |
| LLPS-Hov-0756 | Hordeum vulgare | 53.88 | 1e-131 | 397 |
| LLPS-Orp-0346 | Oryza punctata | 53.88 | 7e-133 | 398 |
| LLPS-Zem-2388 | Zea mays | 53.73 | 2e-135 | 405 |
| LLPS-Org-0397 | Oryza glaberrima | 53.56 | 4e-132 | 397 |
| LLPS-Sob-1835 | Sorghum bicolor | 53.36 | 4e-133 | 399 |
| LLPS-Amt-0796 | Amborella trichopoda | 53.36 | 1e-135 | 405 |
| LLPS-Ors-1686 | Oryza sativa | 53.35 | 7e-131 | 393 |
| LLPS-Vir-1108 | Vigna radiata | 52.03 | 6e-97 | 303 |
| LLPS-Orbr-0711 | Oryza brachyantha | 51.85 | 1e-114 | 352 |
| LLPS-Chr-0819 | Chlamydomonas reinhardtii | 46.81 | 3e-20 | 97.4 |
| LLPS-Php-0026 | Physcomitrella patens | 45.49 | 2e-111 | 344 |
| LLPS-Sem-1621 | Selaginella moellendorffii | 44.0 | 4e-94 | 299 |
| LLPS-Cii-1077 | Ciona intestinalis | 34.33 | 4e-37 | 145 |
| LLPS-Cis-0775 | Ciona savignyi | 34.29 | 3e-36 | 143 |
| LLPS-Osl-0733 | Ostreococcus lucimarinus | 33.33 | 2e-52 | 188 |
| LLPS-Tar-3251 | Takifugu rubripes | 33.08 | 7e-35 | 139 |
| LLPS-Abg-1059 | Absidia glauca | 32.81 | 5e-37 | 145 |
| LLPS-Chc-0325 | Chondrus crispus | 32.52 | 4e-46 | 170 |
| LLPS-Spr-1260 | Sporisorium reilianum | 32.52 | 1e-33 | 136 |
| LLPS-Orl-0295 | Oryzias latipes | 32.49 | 4e-36 | 143 |
| LLPS-Lac-0189 | Latimeria chalumnae | 31.93 | 3e-37 | 146 |
| LLPS-Crn-0882 | Cryptococcus neoformans | 31.91 | 4e-23 | 105 |
| LLPS-Scf-2449 | Scleropages formosus | 31.4 | 3e-38 | 149 |
| LLPS-Miv-0484 | Microbotryum violaceum | 31.3 | 1e-30 | 127 |
| LLPS-Mel-1020 | Melampsora laricipopulina | 31.2 | 3e-25 | 111 |
| LLPS-Anc-1014 | Anolis carolinensis | 30.92 | 8e-41 | 157 |
| LLPS-Leo-3108 | Lepisosteus oculatus | 30.86 | 9e-33 | 133 |
| LLPS-Fud-1468 | Fukomys damarensis | 30.7 | 2e-36 | 144 |
| LLPS-Dio-2468 | Dipodomys ordii | 30.59 | 6e-38 | 149 |
| LLPS-Gaa-2317 | Gasterosteus aculeatus | 30.59 | 2e-29 | 123 |
| LLPS-Asm-2878 | Astyanax mexicanus | 30.57 | 1e-32 | 133 |
| LLPS-Icp-0335 | Ictalurus punctatus | 30.53 | 2e-32 | 132 |
| LLPS-Ict-0864 | Ictidomys tridecemlineatus | 30.52 | 5e-34 | 137 |
| LLPS-Ran-0247 | Rattus norvegicus | 30.46 | 7e-35 | 139 |
| LLPS-Scm-0988 | Scophthalmus maximus | 30.44 | 2e-32 | 132 |
| LLPS-Sah-2951 | Sarcophilus harrisii | 30.43 | 2e-35 | 141 |
| LLPS-Ora-3201 | Ornithorhynchus anatinus | 30.37 | 2e-34 | 138 |
| LLPS-Pof-3202 | Poecilia formosa | 30.23 | 2e-30 | 126 |
| LLPS-Mum-1153 | Mus musculus | 30.21 | 2e-34 | 138 |
| LLPS-Loa-2189 | Loxodonta africana | 30.21 | 5e-35 | 140 |
| LLPS-Dar-2941 | Danio rerio | 30.13 | 5e-36 | 142 |
| LLPS-Otg-0949 | Otolemur garnettii | 30.07 | 2e-35 | 141 |
| LLPS-Fia-0668 | Ficedula albicollis | 30.05 | 3e-33 | 134 |
| LLPS-Orn-2256 | Oreochromis niloticus | 30.02 | 3e-33 | 134 |
| LLPS-Anp-0202 | Anas platyrhynchos | 29.8 | 1e-33 | 136 |
| LLPS-Pes-2848 | Pelodiscus sinensis | 29.8 | 1e-33 | 135 |
| LLPS-Xim-2264 | Xiphophorus maculatus | 29.77 | 4e-34 | 137 |
| LLPS-Mal-0202 | Mandrillus leucophaeus | 29.68 | 2e-34 | 138 |
| LLPS-Cap-0468 | Cavia porcellus | 29.68 | 5e-35 | 140 |
| LLPS-Eqc-3038 | Equus caballus | 29.68 | 3e-34 | 138 |
| LLPS-Mup-1518 | Mustela putorius furo | 29.59 | 1e-27 | 117 |
| LLPS-Mea-3248 | Mesocricetus auratus | 29.52 | 1e-35 | 142 |
| LLPS-Tag-1321 | Taeniopygia guttata | 29.48 | 1e-33 | 135 |
| LLPS-Aim-0310 | Ailuropoda melanoleuca | 29.45 | 1e-34 | 139 |
| LLPS-Myl-3062 | Myotis lucifugus | 29.45 | 4e-35 | 140 |
| LLPS-Mod-0145 | Monodelphis domestica | 29.36 | 3e-34 | 137 |
| LLPS-Orc-2094 | Oryctolagus cuniculus | 29.36 | 2e-34 | 138 |
| LLPS-Xet-3412 | Xenopus tropicalis | 29.36 | 4e-34 | 137 |
| LLPS-Caf-0471 | Canis familiaris | 29.32 | 7e-34 | 136 |
| LLPS-Bot-1552 | Bos taurus | 29.31 | 1e-35 | 142 |
| LLPS-Cae-0768 | Caenorhabditis elegans | 29.27 | 4e-28 | 119 |
| LLPS-Fec-2888 | Felis catus | 29.22 | 1e-32 | 133 |
| LLPS-Sus-2176 | Sus scrofa | 29.14 | 2e-33 | 137 |
| LLPS-Ova-1778 | Ovis aries | 29.14 | 3e-35 | 141 |
| LLPS-Ere-0565 | Erinaceus europaeus | 29.11 | 3e-35 | 140 |
| LLPS-Pat-1021 | Pan troglodytes | 29.0 | 1e-34 | 139 |
| LLPS-Man-1435 | Macaca nemestrina | 29.0 | 5e-34 | 137 |
| LLPS-Nol-0681 | Nomascus leucogenys | 28.83 | 6e-34 | 137 |
| LLPS-Gaga-3587 | Gallus gallus | 28.82 | 6e-38 | 148 |
| LLPS-Chs-2093 | Chlorocebus sabaeus | 28.77 | 4e-34 | 137 |
| LLPS-Maf-4650 | Macaca fascicularis | 28.77 | 8e-34 | 136 |
| LLPS-Aon-0948 | Aotus nancymaae | 28.77 | 6e-34 | 137 |
| LLPS-Cea-0322 | Cercocebus atys | 28.77 | 3e-34 | 137 |
| LLPS-Gog-2438 | Gorilla gorilla | 28.77 | 4e-34 | 137 |
| LLPS-Caj-3046 | Callithrix jacchus | 28.77 | 3e-34 | 138 |
| LLPS-Paa-2839 | Papio anubis | 28.77 | 4e-34 | 137 |
| LLPS-Hos-0875 | Homo sapiens | 28.77 | 4e-34 | 137 |
| LLPS-Poa-3587 | Pongo abelii | 28.77 | 3e-34 | 137 |
| LLPS-Mam-1101 | Macaca mulatta | 28.77 | 8e-34 | 136 |
| LLPS-Rhb-1995 | Rhinopithecus bieti | 28.7 | 1e-34 | 139 |
| LLPS-Cas-2662 | Carlito syrichta | 28.7 | 6e-34 | 137 |
| LLPS-Drm-0511 | Drosophila melanogaster | 28.57 | 3e-20 | 96.7 |
| LLPS-Pap-3061 | Pan paniscus | 28.47 | 6e-34 | 137 |
| LLPS-Urm-0029 | Ursus maritimus | 28.04 | 1e-29 | 124 |
| LLPS-Usm-0089 | Ustilago maydis | 27.85 | 7e-36 | 143 |
| LLPS-Scj-0575 | Schizosaccharomyces japonicus | 27.4 | 2e-12 | 73.2 |
| LLPS-Meg-1921 | Meleagris gallopavo | 27.38 | 5e-31 | 128 |
| LLPS-Scc-1434 | Schizosaccharomyces cryophilus | 26.92 | 2e-16 | 85.5 |
| LLPS-Kop-1104 | Komagataella pastoris | 26.88 | 2e-13 | 75.9 |
| LLPS-Scp-1279 | Schizosaccharomyces pombe | 26.72 | 7e-17 | 86.7 |
| LLPS-Pug-1066 | Puccinia graminis | 24.79 | 7e-19 | 92.8 |
| LLPS-Yal-0734 | Yarrowia lipolytica | 23.7 | 3e-12 | 72.4 |