LLPS-Art-1817
EXL1
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | Protein EXORDIUM-like 1; PHOSPHATE-INDUCED 1 |
| Gene Name: | EXL1, PHI-1, At1g35140, T32G9.32 |
| Ensembl Gene: | AT1G35140 |
| Ensembl Protein: | AT1G35140.1 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ FUNCTION
| May play a role in a brassinosteroid-dependent regulatory pathway that controls growth and development under low carbon and energy availability. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT1G35140.1 | AT1G35140.1 |
| UniProt | Q9C6E4, EXOL1_ARATH, Q9FPI9 | |
| GeneBank | AF324998, AY084831, AC079605, CP002684 | AAM61396.1, AAG40350.1, AAG50598.1, AEE31758.1 |
| RefSeq | NM_103210.4 | NP_174746.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA 60 61 IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT TTRGLSLSLG EQILDQGYSM 120 121 GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI 180 181 WVGNSETQCP GQCAWPFHAP VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG 240 241 YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP 300 301 KTDSCSTLF 309 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTTCTT TTGTGATGGG ATACTTCTTA TTGTTCGCTG TTGCTTTCAT GTGTTTGGAT 60 61 GCGAGAACGG ACAAAACGCA AGATTATACG TCGTTTCAGT ACCATAAAGG AGCTCTCCTC 120 121 ACCGGAGACG TTTCCATCAA CCTAATCTGG TACGGTAAGT TTAAACCGTC GCAGCGTGCA 180 181 ATCGTAACCG ATTTCGTTGC TTCCCTCTCG TCTTCCCGGA GATCGACCAT GGCTCAAAAT 240 241 CCCTCAGTCG CCACGTGGTG GAAGACGGTG GAGAAGTATT ACCAATTCCG CAAGATGACC 300 301 ACGACACGTG GACTCAGTCT CTCCCTCGGA GAACAGATCC TCGACCAAGG ATACTCAATG 360 361 GGAAAATCTT TAACAGAGAA AAACCTCAAA GACTTGGCCG CAAAAGGTGG CCAAAGCTAC 420 421 GCGGTTAACG TCGTGTTGAC CTCAGCTGAC GTGACGGTCC AAGGCTTTTG CATGAACAGA 480 481 TGCGGGTCAC ACGGGACTGG TTCCGGGTCA GGCAAGAAAG GATCAAGATT CGCTTACATC 540 541 TGGGTTGGAA ACTCAGAAAC ACAATGTCCA GGACAATGCG CGTGGCCATT CCACGCGCCG 600 601 GTTTACGGAC CGCAAAGCCC ACCACTAGTG GCACCAAACA ACGACGTTGG TTTAGACGGG 660 661 ATGGTGATTA ACTTGGCGAG TCTCATGGCT GCGACGGCAA CGAACCCGTT CGGAGATGGA 720 721 TATTACCAAG GGCCTAAAAC GGCACCGCTT GAGGCTGGAT CGGCTTGTAC TGGAGTCTAT 780 781 GGGAAAGGTT CGTATCCTGG TTATGCTGGA GAGTTACTTG TGGATGCAAC GACCGGTGGG 840 841 AGTTATAACG TTAAGGGACT GAATGGGAGA AAATATTTGT TACCGGCTTT GTTTGACCCT 900 901 AAAACAGATT CTTGCTCGAC TCTGTTTTGA 930 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Apoplast | |
Cellular Component | Extracellular space | |
Cellular Component | Golgi apparatus | |
Cellular Component | Plant-type cell wall | |
Biological Process | Response to hypoxia |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| Physicochemical | ||||
| AAindex | ||||
| Function | ||||
| CGDB | ||||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-0830 | Arabidopsis lyrata | 93.2 | 0.0 | 571 |
| LLPS-Prp-1267 | Prunus persica | 68.03 | 2e-131 | 384 |
| LLPS-Sol-2068 | Solanum lycopersicum | 67.5 | 5e-124 | 382 |
| LLPS-Brn-2407 | Brassica napus | 66.24 | 1e-141 | 409 |
| LLPS-Pot-1050 | Populus trichocarpa | 66.13 | 9e-139 | 406 |
| LLPS-Mae-0640 | Manihot esculenta | 65.92 | 3e-141 | 409 |
| LLPS-Vir-2251 | Vigna radiata | 65.76 | 3e-133 | 388 |
| LLPS-Sot-1901 | Solanum tuberosum | 64.22 | 1e-134 | 392 |
| LLPS-Thc-2488 | Theobroma cacao | 63.86 | 5e-136 | 395 |
| LLPS-Glm-0849 | Glycine max | 63.69 | 8e-137 | 397 |
| LLPS-Met-0849 | Medicago truncatula | 63.38 | 3e-138 | 401 |
| LLPS-Via-2113 | Vigna angularis | 63.29 | 2e-133 | 389 |
| LLPS-Viv-1174 | Vitis vinifera | 63.24 | 4e-134 | 390 |
| LLPS-Phv-2485 | Phaseolus vulgaris | 62.66 | 6e-134 | 390 |
| LLPS-Nia-2274 | Nicotiana attenuata | 62.62 | 1e-133 | 389 |
| LLPS-Coc-1641 | Corchorus capsularis | 62.27 | 2e-137 | 399 |
| LLPS-Tru-0113 | Triticum urartu | 62.12 | 5e-20 | 90.9 |
| LLPS-Gor-2100 | Gossypium raimondii | 61.99 | 1e-127 | 374 |
| LLPS-Hea-0967 | Helianthus annuus | 60.9 | 8e-127 | 372 |
| LLPS-Tra-0657 | Triticum aestivum | 60.22 | 2e-116 | 345 |
| LLPS-Amt-1612 | Amborella trichopoda | 59.48 | 4e-115 | 342 |
| LLPS-Zem-1680 | Zea mays | 56.43 | 2e-106 | 320 |
| LLPS-Bro-2740 | Brassica oleracea | 56.29 | 5e-108 | 323 |
| LLPS-Orb-1918 | Oryza barthii | 56.18 | 8e-102 | 308 |
| LLPS-Org-1098 | Oryza glaberrima | 56.18 | 8e-102 | 308 |
| LLPS-Orm-1850 | Oryza meridionalis | 56.07 | 4e-102 | 309 |
| LLPS-Orgl-0467 | Oryza glumaepatula | 55.83 | 4e-97 | 305 |
| LLPS-Orp-1534 | Oryza punctata | 55.83 | 3e-95 | 308 |
| LLPS-Ors-1221 | Oryza sativa | 55.83 | 1e-100 | 305 |
| LLPS-Orr-2012 | Oryza rufipogon | 55.83 | 1e-96 | 304 |
| LLPS-Ori-0146 | Oryza indica | 55.36 | 7e-101 | 305 |
| LLPS-Brr-1894 | Brassica rapa | 55.19 | 9e-108 | 323 |
| LLPS-Orbr-1796 | Oryza brachyantha | 55.12 | 4e-99 | 301 |
| LLPS-Dac-2316 | Daucus carota | 55.0 | 3e-107 | 322 |
| LLPS-Cus-1987 | Cucumis sativus | 54.68 | 5e-102 | 308 |
| LLPS-Lep-1322 | Leersia perrieri | 54.61 | 1e-99 | 302 |
| LLPS-Sob-0714 | Sorghum bicolor | 54.55 | 6e-103 | 311 |
| LLPS-Hov-1011 | Hordeum vulgare | 54.26 | 4e-99 | 301 |
| LLPS-Mua-1685 | Musa acuminata | 54.12 | 5e-88 | 272 |
| LLPS-Brd-0989 | Brachypodium distachyon | 53.33 | 9e-96 | 293 |
| LLPS-Sei-1928 | Setaria italica | 53.33 | 5e-95 | 291 |
| LLPS-Orni-0029 | Oryza nivara | 50.0 | 1e-99 | 303 |
| LLPS-Php-2352 | Physcomitrella patens | 48.04 | 2e-79 | 252 |
| LLPS-Sem-0153 | Selaginella moellendorffii | 41.32 | 2e-69 | 226 |