LLPS-Brn-2407
BnaA06g23380D
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | BnaA06g23380D protein |
| Gene Name: | BnaA06g23380D, GSBRNA2T00077307001 |
| Ensembl Gene: | GSBRNA2T00151373001 |
| Ensembl Protein: | CDX90701 |
| Organism: | Brassica napus |
| Taxa ID: | 3708 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDX90701 | CDX90701 |
| UniProt | A0A078I128, A0A078I128_BRANA | |
| GeneBank | LK032568 | CDY43802.1 |
| RefSeq | XM_013787716.1 | XP_013643170.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSSLVFKLFL FVSLFQISIS ARKLAQDEPN QFQSLKYHKG ALLSGKISIN LFWYGKFKPA 60 61 QRAIISDFIT SLSHSSSDQP SVATWWKTTE KYYKLAAGDK TPSPSLSLTL KSQILDETYS 120 121 LGKSLTDRDI RKLASKGDQY DAVNVVLTSA DVAVTGFGMS RCGTHGHARG NAGKRGSKFA 180 181 YIWVGNSETQ CPGQCAWPFH APVYGPQSPP LVAPNNDVGL DGMVINLASL LAGTATNPFG 240 241 NGYYQGPQNA PLEAASACPG VYGKGAYPGY AGNLLVDATT GGSFNAYGAN GRKFLLPALY 300 301 DPTTSDCSTM V 311 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCTTCGT TAGTTTTCAA ACTCTTTTTA TTTGTGTCTC TCTTCCAAAT CTCAATCTCT 60 61 GCTAGGAAAC TAGCACAAGA TGAACCAAAC CAGTTCCAAT CATTGAAATA CCACAAAGGA 120 121 GCTCTTCTCT CCGGCAAAAT CTCCATTAAC CTATTCTGGT ACGGAAAATT CAAACCAGCT 180 181 CAAAGAGCAA TCATCTCCGA TTTCATCACT TCGCTTTCAC ATTCCTCTTC AGACCAACCA 240 241 TCTGTCGCCA CGTGGTGGAA AACCACTGAG AAATACTACA AACTCGCCGC AGGAGATAAA 300 301 ACTCCTTCTC CTTCACTCTC ACTCACTCTC AAGTCACAAA TCCTCGACGA GACTTACTCT 360 361 CTCGGAAAAT CTCTAACAGA CAGAGACATC CGCAAGTTAG CCTCAAAAGG AGATCAATAC 420 421 GATGCGGTTA ACGTTGTTTT GACTTCAGCT GACGTGGCGG TAACTGGATT TGGTATGAGT 480 481 CGATGCGGGA CACACGGACA TGCTCGTGGT AATGCGGGTA AACGCGGATC CAAATTCGCT 540 541 TATATTTGGG TCGGAAACTC CGAAACGCAA TGCCCGGGTC AATGCGCGTG GCCATTTCAC 600 601 GCACCGGTGT ACGGTCCTCA GAGCCCGCCG CTCGTGGCGC CGAACAACGA TGTGGGACTC 660 661 GACGGTATGG TGATTAACTT AGCGAGTCTT TTAGCTGGAA CCGCAACGAA CCCCTTTGGT 720 721 AATGGTTATT ACCAGGGCCC ACAAAACGCA CCGCTCGAAG CTGCGTCCGC GTGTCCTGGT 780 781 GTTTATGGGA AAGGAGCTTA TCCTGGTTAC GCTGGAAATT TACTTGTCGA TGCTACGACG 840 841 GGAGGTAGTT TTAATGCGTA TGGTGCAAAC GGCAGGAAGT TCTTGCTACC TGCGTTGTAT 900 901 GATCCTACAA CGTCGGATTG CTCTACTATG GTTTGA 936 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-2895 | Arabidopsis lyrata | 86.05 | 0.0 | 516 |
| LLPS-Art-1373 | Arabidopsis thaliana | 85.71 | 0.0 | 509 |
| LLPS-Glm-0849 | Glycine max | 72.24 | 2e-150 | 432 |
| LLPS-Viv-1174 | Vitis vinifera | 72.19 | 1e-148 | 427 |
| LLPS-Pot-1050 | Populus trichocarpa | 72.04 | 6e-151 | 437 |
| LLPS-Nia-2274 | Nicotiana attenuata | 71.76 | 4e-144 | 416 |
| LLPS-Sol-2068 | Solanum lycopersicum | 71.18 | 2e-130 | 399 |
| LLPS-Prp-1267 | Prunus persica | 71.15 | 2e-146 | 422 |
| LLPS-Phv-2485 | Phaseolus vulgaris | 71.15 | 1e-144 | 417 |
| LLPS-Sot-1901 | Solanum tuberosum | 70.76 | 3e-143 | 414 |
| LLPS-Via-2113 | Vigna angularis | 70.63 | 3e-143 | 414 |
| LLPS-Gor-2100 | Gossypium raimondii | 70.39 | 2e-148 | 427 |
| LLPS-Met-0849 | Medicago truncatula | 70.13 | 8e-140 | 405 |
| LLPS-Thc-2488 | Theobroma cacao | 69.74 | 3e-149 | 429 |
| LLPS-Vir-2251 | Vigna radiata | 69.44 | 4e-142 | 411 |
| LLPS-Mae-0640 | Manihot esculenta | 69.1 | 1e-143 | 415 |
| LLPS-Coc-1641 | Corchorus capsularis | 69.06 | 9e-148 | 426 |
| LLPS-Hea-0967 | Helianthus annuus | 66.67 | 8e-139 | 402 |
| LLPS-Amt-2231 | Amborella trichopoda | 64.51 | 1e-130 | 382 |
| LLPS-Tra-0657 | Triticum aestivum | 58.16 | 6e-118 | 349 |
| LLPS-Dac-2316 | Daucus carota | 57.58 | 3e-119 | 353 |
| LLPS-Orp-1534 | Oryza punctata | 56.38 | 8e-100 | 320 |
| LLPS-Orm-1850 | Oryza meridionalis | 56.19 | 1e-106 | 320 |
| LLPS-Org-1098 | Oryza glaberrima | 56.19 | 3e-106 | 319 |
| LLPS-Orb-1918 | Oryza barthii | 56.19 | 3e-106 | 319 |
| LLPS-Orr-2012 | Oryza rufipogon | 55.85 | 2e-101 | 317 |
| LLPS-Ors-1221 | Oryza sativa | 55.85 | 4e-105 | 317 |
| LLPS-Orgl-0467 | Oryza glumaepatula | 55.85 | 1e-101 | 317 |
| LLPS-Ori-0146 | Oryza indica | 55.85 | 3e-105 | 317 |
| LLPS-Cus-1987 | Cucumis sativus | 55.81 | 2e-106 | 320 |
| LLPS-Zem-1680 | Zea mays | 55.63 | 2e-109 | 328 |
| LLPS-Orbr-1796 | Oryza brachyantha | 55.52 | 6e-105 | 316 |
| LLPS-Hov-1011 | Hordeum vulgare | 54.82 | 4e-104 | 314 |
| LLPS-Brd-0989 | Brachypodium distachyon | 54.61 | 2e-106 | 320 |
| LLPS-Sei-1928 | Setaria italica | 54.04 | 2e-95 | 292 |
| LLPS-Brr-1894 | Brassica rapa | 53.87 | 7e-107 | 321 |
| LLPS-Sob-0714 | Sorghum bicolor | 53.77 | 3e-105 | 318 |
| LLPS-Lep-1322 | Leersia perrieri | 53.51 | 2e-104 | 315 |
| LLPS-Bro-2740 | Brassica oleracea | 53.2 | 6e-106 | 318 |
| LLPS-Orni-1753 | Oryza nivara | 52.48 | 8e-106 | 319 |
| LLPS-Mua-1685 | Musa acuminata | 52.11 | 1e-86 | 269 |
| LLPS-Php-2352 | Physcomitrella patens | 45.58 | 1e-80 | 254 |
| LLPS-Sem-0153 | Selaginella moellendorffii | 43.45 | 1e-73 | 236 |
| LLPS-Tru-0113 | Triticum urartu | 31.06 | 7e-28 | 113 |