LLPS-Art-1669
TMN2
▼ OVERVIEW
Status: | Reviewed |
Protein Name: | Transmembrane 9 superfamily member 2; Endomembrane protein 8; Transmembrane nine protein 2; AtTMN2 |
Gene Name: | TMN2, EMP8, At1g14670, F10B6.2/F10B6.3, T5E21.15 |
Ensembl Gene: | AT1G14670 |
Ensembl Protein: | AT1G14670.1 |
Organism: | Arabidopsis thaliana |
Taxa ID: | 3702 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Description | Tissue/Cell | PMIDs |
---|---|---|---|
Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | AT1G14670.1 | AT1G14670.1 |
UniProt | Q940S0, TMN2_ARATH, Q9LQW5, Q9LQW6, Q9MA18 | |
GeneBank | AC010657, AY093961, AC006917, CP002684, AY053419 | AAK96649.1, AEE29200.1, AAF63170.1, AAM16222.1, AAF79217.1, AAF79216.1 |
RefSeq | NM_101334.3 | NP_172919.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MRTPTTILLL VGAILFSGAG YVRSDASDHR YKEGDTVPLY ANKVGPFHNP SETYRYFDLP 60 61 FCIPEGVKEK KEALGEVLNG DRLVSAPYKL NFRDEKESEV YCNKKLSKEE VKQFRKAVEK 120 121 DYYFQMYYDD LPIWGFIGKV DKDIKSDPSE FKYFLYKHIQ FEILYNKDRV IEISARMDPH 180 181 SLVDLTEDKE VDAEFMYTVK WKETETPFEK RMEKYSMSSS LPHHLEIHWF SIINSCVTVL 240 241 LLTGFLATIL MRVLKNDFMK YAQDEEAADD QEETGWKYIH GDVFRFPTHN SLFAASLGSG 300 301 TQLFTLTIFI FMLALVGVFY PYNRGALFTA LVVIYALTSG IAGYTSASFY CQLEGKSWVR 360 361 NLLLTGCLFC GPLFLTFCFL NTVAITYTAT AALPFGTIVV IVLIWTLVTS PLLVLGGIAG 420 421 KNSKAEFQAP CRTTKYPREI PPLPWYRSAI PQMAMAGFLP FSAIYIELYY IFASVWGHRI 480 481 YTIYSILFIV FIILIIVTAF ITVALTYFQL AAEDHQWWWR SFLCGGSTGL FIYAYCLYYY 540 541 YARSDMSGFM QTSFFFGYMA CICYGFFLML GTVGFRAALL FVRHIYRSIK CE 592 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAGGACAC CGACGACGAT TCTCCTTCTT GTCGGAGCTA TCCTCTTCTC CGGCGCCGGC 60 61 TATGTCAGAT CCGACGCCTC CGACCACCGT TACAAGGAAG GAGACACCGT TCCTCTCTAC 120 121 GCCAACAAGG TCGGCCCATT TCACAATCCA AGTGAGACGT ATCGATATTT TGATCTTCCC 180 181 TTCTGTATCC CAGAGGGTGT GAAAGAGAAG AAGGAAGCTC TTGGCGAGGT TCTAAACGGG 240 241 GATCGGCTAG TTAGCGCTCC ATACAAGCTC AACTTCAGAG ATGAAAAAGA GTCTGAGGTA 300 301 TACTGCAACA AGAAGTTGAG TAAAGAAGAG GTCAAACAGT TCAGAAAAGC TGTTGAGAAG 360 361 GACTACTACT TCCAGATGTA CTATGATGAT CTACCTATCT GGGGATTCAT TGGAAAGGTT 420 421 GACAAGGATA TCAAATCTGA TCCGAGTGAA TTCAAATATT TCTTGTACAA GCACATTCAG 480 481 TTTGAGATTC TATACAATAA GGACCGTGTG ATCGAGATCA GTGCTAGAAT GGATCCTCAT 540 541 TCGCTTGTGG ATCTCACTGA GGATAAGGAA GTTGATGCAG AGTTTATGTA CACTGTGAAG 600 601 TGGAAGGAAA CTGAGACTCC TTTTGAGAAA AGAATGGAGA AGTACTCTAT GTCTTCTTCT 660 661 CTTCCACATC ATTTGGAAAT CCACTGGTTC TCCATTATTA ACTCCTGTGT CACTGTCCTT 720 721 CTTTTGACTG GATTCCTTGC AACTATCTTG ATGCGAGTCC TCAAGAACGA TTTCATGAAG 780 781 TATGCTCAAG ATGAGGAAGC TGCTGATGAT CAAGAGGAAA CTGGATGGAA GTACATTCAT 840 841 GGCGATGTGT TTCGGTTCCC TACTCACAAT TCTTTATTTG CTGCATCGCT CGGTAGTGGC 900 901 ACTCAATTGT TCACGCTCAC CATATTTATT TTCATGCTTG CTCTTGTTGG AGTGTTCTAC 960 961 CCATACAACC GAGGAGCACT CTTTACCGCT TTGGTGGTCA TTTACGCTCT CACTTCTGGA 1020 1021 ATTGCCGGAT ACACATCTGC CTCTTTCTAC TGTCAACTTG AAGGAAAAAG CTGGGTGAGG 1080 1081 AACTTGTTAC TCACTGGATG TCTCTTCTGT GGCCCATTAT TCCTAACCTT TTGCTTCCTT 1140 1141 AACACCGTAG CCATCACCTA CACTGCAACC GCTGCATTAC CCTTTGGAAC CATTGTGGTG 1200 1201 ATCGTCCTTA TATGGACTCT AGTTACCTCA CCTTTACTCG TTTTGGGTGG TATCGCGGGT 1260 1261 AAAAACAGCA AAGCAGAGTT CCAAGCACCA TGCCGTACAA CCAAATATCC TCGTGAGATT 1320 1321 CCACCACTCC CTTGGTACAG AAGTGCTATT CCTCAGATGG CCATGGCTGG TTTTCTTCCT 1380 1381 TTCAGTGCCA TCTACATCGA GCTTTACTAC ATTTTCGCTA GTGTCTGGGG TCACCGGATC 1440 1441 TACACCATCT ACAGCATCTT ATTCATCGTT TTCATCATTC TCATCATCGT CACTGCTTTT 1500 1501 ATAACCGTTG CCTTGACTTA CTTCCAACTC GCTGCTGAAG ATCACCAATG GTGGTGGAGA 1560 1561 TCATTCCTAT GTGGTGGATC GACCGGTTTG TTTATCTACG CATACTGCTT ATACTATTAC 1620 1621 TACGCACGAT CAGACATGTC GGGTTTTATG CAAACCTCGT TTTTCTTCGG ATACATGGCT 1680 1681 TGCATTTGCT ACGGATTCTT CTTAATGCTC GGAACAGTTG GCTTCCGCGC AGCCCTCCTC 1740 1741 TTTGTCCGTC ACATTTACCG GTCGATCAAA TGCGAGTAA 1779 |
▼ ANNOTATION
Disorder | ||||
IUPred2A |
Physicochemical | ||||
AAindex |
Function | ||||
CGDB |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Bro-0343 | Brassica oleracea | 97.92 | 0.0 | 1053 |
LLPS-Brn-2848 | Brassica napus | 97.92 | 0.0 | 1053 |
LLPS-Brr-2618 | Brassica rapa | 96.04 | 0.0 | 1043 |
LLPS-Gor-1844 | Gossypium raimondii | 90.41 | 0.0 | 993 |
LLPS-Mae-0377 | Manihot esculenta | 89.7 | 0.0 | 999 |
LLPS-Glm-2876 | Glycine max | 88.29 | 0.0 | 966 |
LLPS-Prp-0933 | Prunus persica | 88.01 | 0.0 | 959 |
LLPS-Phv-0204 | Phaseolus vulgaris | 87.69 | 0.0 | 938 |
LLPS-Via-2397 | Vigna angularis | 87.37 | 0.0 | 943 |
LLPS-Nia-1803 | Nicotiana attenuata | 86.62 | 0.0 | 947 |
LLPS-Cus-1689 | Cucumis sativus | 86.49 | 0.0 | 954 |
LLPS-Sot-1835 | Solanum tuberosum | 86.32 | 0.0 | 952 |
LLPS-Vir-1532 | Vigna radiata | 85.77 | 0.0 | 820 |
LLPS-Hea-2041 | Helianthus annuus | 85.27 | 0.0 | 926 |
LLPS-Zem-0562 | Zea mays | 84.98 | 0.0 | 900 |
LLPS-Dac-2377 | Daucus carota | 84.92 | 0.0 | 837 |
LLPS-Tru-1303 | Triticum urartu | 84.85 | 0.0 | 832 |
LLPS-Mua-1678 | Musa acuminata | 83.96 | 0.0 | 915 |
LLPS-Ori-2318 | Oryza indica | 83.05 | 3e-90 | 309 |
LLPS-Amt-1507 | Amborella trichopoda | 82.58 | 0.0 | 889 |
LLPS-Sol-2229 | Solanum lycopersicum | 82.49 | 0.0 | 922 |
LLPS-Pot-2193 | Populus trichocarpa | 82.36 | 0.0 | 910 |
LLPS-Orm-1448 | Oryza meridionalis | 82.23 | 0.0 | 716 |
LLPS-Org-1203 | Oryza glaberrima | 81.83 | 0.0 | 874 |
LLPS-Orb-2394 | Oryza barthii | 81.83 | 0.0 | 874 |
LLPS-Ors-2177 | Oryza sativa | 81.66 | 0.0 | 871 |
LLPS-Lep-1099 | Leersia perrieri | 81.1 | 0.0 | 867 |
LLPS-Brd-0371 | Brachypodium distachyon | 80.49 | 0.0 | 877 |
LLPS-Orr-2049 | Oryza rufipogon | 80.35 | 0.0 | 881 |
LLPS-Orni-0859 | Oryza nivara | 80.35 | 0.0 | 881 |
LLPS-Orgl-1391 | Oryza glumaepatula | 80.35 | 0.0 | 880 |
LLPS-Orbr-0555 | Oryza brachyantha | 79.96 | 0.0 | 864 |
LLPS-Sob-0953 | Sorghum bicolor | 79.82 | 0.0 | 876 |
LLPS-Tra-2380 | Triticum aestivum | 79.3 | 0.0 | 867 |
LLPS-Orp-2379 | Oryza punctata | 79.07 | 0.0 | 885 |
LLPS-Sei-1856 | Setaria italica | 78.42 | 0.0 | 880 |
LLPS-Met-1349 | Medicago truncatula | 77.21 | 0.0 | 850 |
LLPS-Php-1393 | Physcomitrella patens | 75.47 | 0.0 | 813 |
LLPS-Chr-1325 | Chlamydomonas reinhardtii | 68.29 | 0.0 | 715 |
LLPS-Sem-2316 | Selaginella moellendorffii | 67.65 | 0.0 | 742 |
LLPS-Lac-1388 | Latimeria chalumnae | 36.65 | 7e-72 | 246 |
LLPS-Osl-0275 | Ostreococcus lucimarinus | 34.93 | 5e-98 | 319 |
LLPS-Aon-2005 | Aotus nancymaae | 34.86 | 5e-82 | 277 |
LLPS-Coc-0554 | Corchorus capsularis | 34.7 | 6e-98 | 327 |
LLPS-Fia-1039 | Ficedula albicollis | 34.34 | 3e-81 | 275 |
LLPS-Arl-0334 | Arabidopsis lyrata | 34.27 | 2e-94 | 309 |
LLPS-Thc-0330 | Theobroma cacao | 34.26 | 6e-100 | 324 |
LLPS-Tut-1061 | Tursiops truncatus | 34.24 | 2e-80 | 272 |
LLPS-Ere-0383 | Erinaceus europaeus | 34.18 | 5e-80 | 271 |
LLPS-Hov-1583 | Hordeum vulgare | 33.99 | 1e-100 | 325 |
LLPS-Abg-1748 | Absidia glauca | 33.86 | 1e-89 | 296 |
LLPS-Anc-2216 | Anolis carolinensis | 33.72 | 4e-81 | 274 |
LLPS-Mea-3902 | Mesocricetus auratus | 33.67 | 9e-80 | 271 |
LLPS-Xet-1340 | Xenopus tropicalis | 33.66 | 1e-84 | 284 |
LLPS-Viv-2308 | Vitis vinifera | 33.49 | 2e-101 | 328 |
LLPS-Gaga-3628 | Gallus gallus | 33.28 | 3e-91 | 301 |
LLPS-Tag-3096 | Taeniopygia guttata | 33.28 | 3e-92 | 304 |
LLPS-Anp-2770 | Anas platyrhynchos | 33.22 | 5e-94 | 308 |
LLPS-Tum-0680 | Tuber melanosporum | 33.22 | 5e-83 | 279 |
LLPS-Pof-3344 | Poecilia formosa | 33.12 | 7e-81 | 274 |
LLPS-Meg-2207 | Meleagris gallopavo | 33.11 | 5e-91 | 300 |
LLPS-Pes-0533 | Pelodiscus sinensis | 33.11 | 2e-91 | 301 |
LLPS-Ora-2814 | Ornithorhynchus anatinus | 32.91 | 4e-80 | 272 |
LLPS-Cae-1598 | Caenorhabditis elegans | 32.9 | 6e-96 | 314 |
LLPS-Tar-0091 | Takifugu rubripes | 32.75 | 7e-79 | 268 |
LLPS-Cas-2187 | Carlito syrichta | 32.6 | 7e-93 | 305 |
LLPS-Sah-1577 | Sarcophilus harrisii | 32.36 | 1e-91 | 302 |
LLPS-Dar-2753 | Danio rerio | 32.33 | 2e-93 | 307 |
LLPS-Eqc-1977 | Equus caballus | 32.2 | 1e-91 | 302 |
LLPS-Otg-4134 | Otolemur garnettii | 32.17 | 2e-91 | 301 |
LLPS-Gaa-3825 | Gasterosteus aculeatus | 32.14 | 3e-96 | 314 |
LLPS-Mod-4184 | Monodelphis domestica | 32.09 | 2e-86 | 289 |
LLPS-Caf-3211 | Canis familiaris | 32.04 | 2e-91 | 301 |
LLPS-Dio-1842 | Dipodomys ordii | 32.04 | 9e-92 | 302 |
LLPS-Poa-3468 | Pongo abelii | 32.03 | 6e-92 | 303 |
LLPS-Bot-4199 | Bos taurus | 32.03 | 4e-92 | 303 |
LLPS-Fus-0699 | Fusarium solani | 31.99 | 9e-82 | 276 |
LLPS-Fud-2004 | Fukomys damarensis | 31.99 | 2e-91 | 301 |
LLPS-Urm-1506 | Ursus maritimus | 31.98 | 3e-93 | 306 |
LLPS-Fec-1009 | Felis catus | 31.98 | 3e-93 | 306 |
LLPS-Aim-1186 | Ailuropoda melanoleuca | 31.98 | 2e-93 | 306 |
LLPS-Ova-0823 | Ovis aries | 31.92 | 4e-93 | 306 |
LLPS-Loa-4498 | Loxodonta africana | 31.89 | 2e-90 | 300 |
LLPS-Orc-4114 | Oryctolagus cuniculus | 31.88 | 1e-91 | 302 |
LLPS-Ict-0586 | Ictidomys tridecemlineatus | 31.88 | 5e-91 | 301 |
LLPS-Hos-3362 | Homo sapiens | 31.87 | 2e-91 | 301 |
LLPS-Pat-0488 | Pan troglodytes | 31.87 | 2e-91 | 301 |
LLPS-Man-4106 | Macaca nemestrina | 31.87 | 2e-91 | 301 |
LLPS-Mam-4453 | Macaca mulatta | 31.87 | 2e-91 | 301 |
LLPS-Nol-4034 | Nomascus leucogenys | 31.87 | 2e-91 | 301 |
LLPS-Maf-2053 | Macaca fascicularis | 31.87 | 2e-91 | 301 |
LLPS-Chs-4369 | Chlorocebus sabaeus | 31.87 | 2e-91 | 301 |
LLPS-Cea-0012 | Cercocebus atys | 31.87 | 2e-91 | 301 |
LLPS-Gog-3956 | Gorilla gorilla | 31.87 | 2e-91 | 301 |
LLPS-Paa-3202 | Papio anubis | 31.87 | 2e-91 | 301 |
LLPS-Scm-3992 | Scophthalmus maximus | 31.83 | 2e-93 | 306 |
LLPS-Xim-4085 | Xiphophorus maculatus | 31.83 | 6e-95 | 311 |
LLPS-Myl-2870 | Myotis lucifugus | 31.83 | 8e-89 | 295 |
LLPS-Sus-2102 | Sus scrofa | 31.82 | 4e-92 | 303 |
LLPS-Caj-2401 | Callithrix jacchus | 31.82 | 4e-93 | 306 |
LLPS-Leo-0968 | Lepisosteus oculatus | 31.78 | 7e-97 | 316 |
LLPS-Mup-1099 | Mustela putorius furo | 31.75 | 8e-84 | 281 |
LLPS-Gas-0321 | Galdieria sulphuraria | 31.7 | 5e-83 | 279 |
LLPS-Icp-2769 | Ictalurus punctatus | 31.45 | 1e-91 | 302 |
LLPS-Orl-4008 | Oryzias latipes | 31.44 | 6e-92 | 303 |
LLPS-Mal-1791 | Mandrillus leucophaeus | 31.36 | 5e-87 | 290 |
LLPS-Orn-1665 | Oreochromis niloticus | 31.35 | 2e-94 | 309 |
LLPS-Cis-1762 | Ciona savignyi | 31.32 | 8e-82 | 276 |
LLPS-Asm-0562 | Astyanax mexicanus | 31.32 | 7e-92 | 303 |
LLPS-Scf-2432 | Scleropages formosus | 31.2 | 2e-92 | 304 |
LLPS-Ten-1691 | Tetraodon nigroviridis | 31.19 | 2e-92 | 304 |
LLPS-Rhb-4813 | Rhinopithecus bieti | 31.08 | 9e-92 | 302 |
LLPS-Mum-3874 | Mus musculus | 31.03 | 4e-90 | 298 |
LLPS-Ran-4442 | Rattus norvegicus | 30.78 | 5e-90 | 298 |
LLPS-Cym-0520 | Cyanidioschyzon merolae | 30.56 | 1e-67 | 238 |
LLPS-Pap-0523 | Pan paniscus | 30.0 | 3e-77 | 263 |
LLPS-Cap-1802 | Cavia porcellus | 29.97 | 2e-79 | 269 |
LLPS-Cii-2011 | Ciona intestinalis | 29.92 | 2e-74 | 256 |
LLPS-Chc-0989 | Chondrus crispus | 29.77 | 3e-68 | 239 |