LLPS-Art-1536
PBB1
▼ OVERVIEW
| Status: | Reviewed |
| Protein Name: | Proteasome subunit beta type-7-A; 20S proteasome beta subunit B-1; Proteasome component FA; Proteasome component FB; Proteasome subunit beta type-2 |
| Gene Name: | PBB1, PRCFA, PRCFB, At3g27430, K1G2.15 |
| Ensembl Gene: | AT3G27430 |
| Ensembl Protein: | AT3G27430.3 |
| Organism: | Arabidopsis thaliana |
| Taxa ID: | 3702 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Description | Tissue/Cell | PMIDs |
|---|---|---|---|
| Nucleolus | "...Comparative analysis revealed that 562 proteins were consistently identified in both experimental data sets." | 3 weeks-old Arabidopsis thaliana plants | 29104584 |
| Nucleolus | "...We identified 1602 proteins in the nucleolar and 2544 proteins in the nuclear fraction with an overlap of 1429 proteins." | Arabidopsis thaliana cells | 26980300 |
▼ FUNCTION
| The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | AT3G27430.3 | AT3G27430.3 |
| Ensembl | AT3G27430.2 | AT3G27430.2 |
| Ensembl | AT3G27430.1 | AT3G27430.1 |
| UniProt | O23710, PSB7A_ARATH, O81152, Q3EAZ2, Q9T0L7 | |
| GeneBank | BT003339, Y13178, AY086464, CP002686, BT006306, AF043530, AB024028, Y13174 | AAO29958.1, AEE77319.1, AAP13414.1, CAA73621.1, BAA95719.1, AEE77318.1, AAM63467.1, CAA73617.1, AAC32066.1 |
| RefSeq | NM_113658.3, NM_180310.1 | NP_566818.1, NP_850641.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSQSTVDVPP KGGFSFDLCK RNDMLTQKGL KAPSFLKTGT TIVGLIFKDG VILGADTRAT 60 61 EGPIVADKNC EKIHYMAPNI YCCGAGTAAD TEAVTDMVSS QLRLHRYQTG RDSRVITALT 120 121 LLKKHLFSYQ GHVSAALVLG GVDITGPHLH TIYPHGSTDT LPFATMGSGS LAAMSVFEAK 180 181 YKEGLTRDEG IKLVAESICS GIFNDLGSGS NVDICVITKG NKEYLRNYME PNPRTYVSSK 240 241 GYSFTKKTEV LLTKITPLLE RVEITEVGEA MEE 273 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCGCAAT CAACCGTAGA TGTTCCGCCA AAGGGTGGGT TTAGCTTCGA TCTGTGTAAG 60 61 AGAAATGATA TGCTTACACA AAAGGGTCTT AAAGCTCCGT CTTTTTTGAA GACTGGAACA 120 121 ACCATTGTTG GTTTGATTTT CAAGGATGGT GTGATACTAG GGGCAGATAC CCGAGCAACT 180 181 GAGGGGCCAA TTGTTGCTGA TAAGAACTGT GAGAAGATTC ACTATATGGC ACCAAACATA 240 241 TATTGCTGTG GTGCAGGAAC TGCGGCTGAT ACTGAAGCAG TCACTGATAT GGTCAGCTCA 300 301 CAGCTGCGAT TGCATCGTTA CCAGACTGGT CGAGACTCTC GGGTCATTAC TGCTTTGACC 360 361 CTTCTCAAAA AACATCTTTT CAGCTACCAA GGTCATGTCT CTGCTGCTCT TGTACTCGGT 420 421 GGAGTTGATA TCACTGGTCC ACATCTGCAT ACTATATACC CACACGGTTC AACTGACACT 480 481 CTTCCATTCG CCACAATGGG TTCGGGTTCT CTTGCTGCTA TGTCTGTGTT TGAGGCAAAG 540 541 TATAAAGAAG GCCTAACTAG GGATGAAGGA ATTAAGCTGG TCGCTGAATC CATATGCTCG 600 601 GGTATATTCA ATGACCTGGG TAGTGGTAGC AACGTGGACA TCTGCGTGAT CACAAAGGGG 660 661 AACAAGGAAT ATCTCAGGAA CTACATGGAA CCAAACCCAA GAACCTATGT CAGCAGCAAA 720 721 GGCTATTCCT TCACCAAGAA AACTGAGGTT CTTCTCACCA AAATCACCCC ATTGCTGGAG 780 781 CGAGTCGAAA TCACAGAAGT TGGTGAAGCT ATGGAGGAAT AA 822 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Nucleus | |
Cellular Component | Proteasome complex | |
Cellular Component | Proteasome core complex | |
Cellular Component | Proteasome core complex, beta-subunit complex | |
Molecular Function | Endopeptidase activity | |
Molecular Function | Threonine-type endopeptidase activity | |
Biological Process | Proteasomal protein catabolic process | |
Biological Process | Proteasomal ubiquitin-independent protein catabolic process | |
Biological Process | Proteasome-mediated ubiquitin-dependent protein catabolic process |
▼ ANNOTATION
| Disorder | ||||
| IUPred2A | ||||
| PTM | ||||
| EPSD | ||||
| Physicochemical | ||||
| Compute pI/Mw | AAindex | |||
| Function | ||||
| PIRSF | ||||
| Localization | ||||
| COMPARTMENTS | ||||
| Expression | ||||
| ArrayExpress | ||||
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Arl-2330 | Arabidopsis lyrata | 99.27 | 0.0 | 560 |
| LLPS-Bro-1335 | Brassica oleracea | 98.18 | 0.0 | 552 |
| LLPS-Brn-1040 | Brassica napus | 98.18 | 0.0 | 555 |
| LLPS-Brr-0181 | Brassica rapa | 97.44 | 0.0 | 550 |
| LLPS-Cus-1817 | Cucumis sativus | 87.55 | 0.0 | 508 |
| LLPS-Glm-0921 | Glycine max | 86.25 | 7e-175 | 491 |
| LLPS-Sot-0109 | Solanum tuberosum | 85.78 | 5e-141 | 407 |
| LLPS-Pot-0416 | Populus trichocarpa | 85.66 | 2e-176 | 495 |
| LLPS-Vir-0446 | Vigna radiata | 85.5 | 6e-174 | 488 |
| LLPS-Prp-2070 | Prunus persica | 85.35 | 3e-177 | 497 |
| LLPS-Thc-1696 | Theobroma cacao | 85.35 | 1e-176 | 495 |
| LLPS-Phv-1452 | Phaseolus vulgaris | 85.13 | 3e-173 | 486 |
| LLPS-Met-1989 | Medicago truncatula | 85.13 | 1e-175 | 493 |
| LLPS-Gor-2454 | Gossypium raimondii | 85.04 | 3e-174 | 489 |
| LLPS-Mae-2591 | Manihot esculenta | 84.25 | 3e-175 | 492 |
| LLPS-Sol-1327 | Solanum lycopersicum | 84.07 | 3e-172 | 484 |
| LLPS-Org-1249 | Oryza glaberrima | 83.58 | 2e-165 | 466 |
| LLPS-Orm-1836 | Oryza meridionalis | 83.58 | 2e-165 | 466 |
| LLPS-Orr-1126 | Oryza rufipogon | 83.58 | 2e-165 | 466 |
| LLPS-Ors-0747 | Oryza sativa | 83.58 | 2e-165 | 466 |
| LLPS-Orgl-0008 | Oryza glumaepatula | 83.58 | 2e-165 | 466 |
| LLPS-Orni-1175 | Oryza nivara | 83.58 | 2e-165 | 466 |
| LLPS-Orb-0211 | Oryza barthii | 83.58 | 2e-165 | 466 |
| LLPS-Ori-0814 | Oryza indica | 83.58 | 2e-165 | 466 |
| LLPS-Nia-0448 | Nicotiana attenuata | 83.46 | 2e-170 | 480 |
| LLPS-Lep-0799 | Leersia perrieri | 83.27 | 2e-166 | 469 |
| LLPS-Orp-0996 | Oryza punctata | 83.21 | 1e-165 | 467 |
| LLPS-Viv-0772 | Vitis vinifera | 83.15 | 2e-172 | 484 |
| LLPS-Amt-1619 | Amborella trichopoda | 82.85 | 3e-169 | 476 |
| LLPS-Zem-0533 | Zea mays | 82.59 | 2e-167 | 472 |
| LLPS-Brd-2473 | Brachypodium distachyon | 82.59 | 2e-166 | 469 |
| LLPS-Dac-1575 | Daucus carota | 82.42 | 4e-170 | 479 |
| LLPS-Hea-2006 | Helianthus annuus | 82.33 | 1e-166 | 470 |
| LLPS-Sob-1237 | Sorghum bicolor | 82.22 | 4e-168 | 474 |
| LLPS-Orbr-0831 | Oryza brachyantha | 82.16 | 8e-164 | 462 |
| LLPS-Sei-2010 | Setaria italica | 81.85 | 2e-164 | 467 |
| LLPS-Coc-1009 | Corchorus capsularis | 81.32 | 2e-168 | 474 |
| LLPS-Mua-2204 | Musa acuminata | 81.02 | 1e-165 | 468 |
| LLPS-Tra-3050 | Triticum aestivum | 80.37 | 2e-159 | 452 |
| LLPS-Hov-1711 | Hordeum vulgare | 80.0 | 1e-157 | 449 |
| LLPS-Php-2134 | Physcomitrella patens | 75.64 | 2e-152 | 434 |
| LLPS-Sem-0696 | Selaginella moellendorffii | 73.76 | 3e-142 | 408 |
| LLPS-Tru-1100 | Triticum urartu | 70.07 | 4e-129 | 373 |
| LLPS-Anc-1575 | Anolis carolinensis | 68.09 | 1e-66 | 211 |
| LLPS-Gas-0193 | Galdieria sulphuraria | 67.36 | 9e-117 | 343 |
| LLPS-Drm-1480 | Drosophila melanogaster | 64.98 | 6e-110 | 326 |
| LLPS-Chr-1111 | Chlamydomonas reinhardtii | 64.89 | 1e-116 | 343 |
| LLPS-Chc-0417 | Chondrus crispus | 64.81 | 1e-105 | 315 |
| LLPS-Put-0398 | Puccinia triticina | 63.27 | 8e-98 | 296 |
| LLPS-Mel-1532 | Melampsora laricipopulina | 63.27 | 4e-96 | 291 |
| LLPS-Abg-0798 | Absidia glauca | 62.36 | 7e-115 | 338 |
| LLPS-Pug-0908 | Puccinia graminis | 61.86 | 2e-99 | 300 |
| LLPS-Crn-0719 | Cryptococcus neoformans | 60.98 | 4e-99 | 300 |
| LLPS-Xet-3077 | Xenopus tropicalis | 60.92 | 4e-106 | 316 |
| LLPS-Ran-1942 | Rattus norvegicus | 60.92 | 3e-103 | 310 |
| LLPS-Usm-1232 | Ustilago maydis | 59.92 | 1e-106 | 318 |
| LLPS-Leo-3685 | Lepisosteus oculatus | 59.78 | 1e-104 | 313 |
| LLPS-Cii-1744 | Ciona intestinalis | 59.62 | 1e-105 | 315 |
| LLPS-Gaa-1820 | Gasterosteus aculeatus | 59.04 | 8e-104 | 310 |
| LLPS-Orn-2952 | Oreochromis niloticus | 58.74 | 2e-103 | 310 |
| LLPS-Myl-3012 | Myotis lucifugus | 58.61 | 2e-107 | 320 |
| LLPS-Spr-1382 | Sporisorium reilianum | 58.43 | 5e-103 | 309 |
| LLPS-Ere-0092 | Erinaceus europaeus | 58.27 | 2e-53 | 177 |
| LLPS-Nef-1258 | Neosartorya fischeri | 58.2 | 4e-94 | 285 |
| LLPS-Tag-3362 | Taeniopygia guttata | 58.05 | 6e-104 | 310 |
| LLPS-Gog-1054 | Gorilla gorilla | 58.05 | 1e-106 | 318 |
| LLPS-Asf-1227 | Aspergillus flavus | 58.02 | 9e-96 | 290 |
| LLPS-Aso-0065 | Aspergillus oryzae | 58.02 | 9e-96 | 290 |
| LLPS-Asni-1560 | Aspergillus niger | 58.02 | 2e-92 | 281 |
| LLPS-Icp-2373 | Ictalurus punctatus | 57.99 | 1e-101 | 306 |
| LLPS-Tar-2914 | Takifugu rubripes | 57.93 | 2e-103 | 310 |
| LLPS-Asfu-0592 | Aspergillus fumigatus | 57.79 | 5e-94 | 285 |
| LLPS-Asn-0197 | Aspergillus nidulans | 57.79 | 2e-93 | 284 |
| LLPS-Ova-4144 | Ovis aries | 57.78 | 1e-106 | 318 |
| LLPS-Aon-4760 | Aotus nancymaae | 57.78 | 6e-107 | 318 |
| LLPS-Scf-3847 | Scleropages formosus | 57.71 | 6e-104 | 311 |
| LLPS-Miv-0693 | Microbotryum violaceum | 57.61 | 1e-91 | 280 |
| LLPS-Ast-1578 | Aspergillus terreus | 57.61 | 2e-92 | 281 |
| LLPS-Asc-0556 | Aspergillus clavatus | 57.61 | 2e-93 | 284 |
| LLPS-Dar-1713 | Danio rerio | 57.52 | 5e-100 | 301 |
| LLPS-Beb-1344 | Beauveria bassiana | 57.5 | 2e-94 | 286 |
| LLPS-Anp-2870 | Anas platyrhynchos | 57.46 | 1e-88 | 270 |
| LLPS-Nol-0825 | Nomascus leucogenys | 57.45 | 1e-107 | 320 |
| LLPS-Poa-0985 | Pongo abelii | 57.45 | 9e-108 | 320 |
| LLPS-Man-0816 | Macaca nemestrina | 57.45 | 1e-107 | 320 |
| LLPS-Cap-1710 | Cavia porcellus | 57.41 | 1e-106 | 317 |
| LLPS-Paa-3846 | Papio anubis | 57.41 | 3e-107 | 320 |
| LLPS-Mal-2564 | Mandrillus leucophaeus | 57.41 | 4e-107 | 320 |
| LLPS-Fud-3644 | Fukomys damarensis | 57.41 | 7e-107 | 318 |
| LLPS-Caj-1572 | Callithrix jacchus | 57.41 | 2e-105 | 315 |
| LLPS-Maf-1547 | Macaca fascicularis | 57.41 | 3e-107 | 320 |
| LLPS-Eqc-3009 | Equus caballus | 57.09 | 2e-106 | 317 |
| LLPS-Otg-2676 | Otolemur garnettii | 57.09 | 5e-106 | 316 |
| LLPS-Rhb-2544 | Rhinopithecus bieti | 57.09 | 6e-107 | 318 |
| LLPS-Hos-4613 | Homo sapiens | 57.09 | 4e-107 | 319 |
| LLPS-Pap-0938 | Pan paniscus | 57.09 | 5e-107 | 318 |
| LLPS-Pat-0733 | Pan troglodytes | 57.09 | 5e-107 | 318 |
| LLPS-Mum-4882 | Mus musculus | 57.09 | 4e-107 | 319 |
| LLPS-Chs-4505 | Chlorocebus sabaeus | 57.09 | 2e-107 | 320 |
| LLPS-Cea-3330 | Cercocebus atys | 57.09 | 2e-106 | 317 |
| LLPS-Scj-0668 | Schizosaccharomyces japonicus | 57.08 | 7e-92 | 280 |
| LLPS-Cas-1596 | Carlito syrichta | 57.04 | 9e-105 | 313 |
| LLPS-Urm-0666 | Ursus maritimus | 57.04 | 7e-104 | 312 |
| LLPS-Fec-1253 | Felis catus | 57.04 | 2e-105 | 314 |
| LLPS-Aim-0609 | Ailuropoda melanoleuca | 57.04 | 3e-105 | 314 |
| LLPS-Bot-2648 | Bos taurus | 57.04 | 4e-105 | 314 |
| LLPS-Mea-3734 | Mesocricetus auratus | 57.04 | 3e-105 | 314 |
| LLPS-Dio-2772 | Dipodomys ordii | 56.73 | 3e-105 | 314 |
| LLPS-Caf-3627 | Canis familiaris | 56.67 | 3e-104 | 311 |
| LLPS-Loa-2007 | Loxodonta africana | 56.67 | 7e-105 | 313 |
| LLPS-Tut-1503 | Tursiops truncatus | 56.67 | 1e-104 | 313 |
| LLPS-Fia-1630 | Ficedula albicollis | 56.64 | 9e-86 | 263 |
| LLPS-Trr-0121 | Trichoderma reesei | 56.61 | 2e-94 | 286 |
| LLPS-Fus-1034 | Fusarium solani | 56.61 | 5e-94 | 285 |
| LLPS-Mup-1759 | Mustela putorius furo | 56.36 | 2e-104 | 312 |
| LLPS-Sus-0242 | Sus scrofa | 56.36 | 3e-104 | 311 |
| LLPS-Xim-3587 | Xiphophorus maculatus | 56.32 | 1e-100 | 303 |
| LLPS-Trv-0726 | Trichoderma virens | 56.2 | 7e-94 | 285 |
| LLPS-Nec-1497 | Neurospora crassa | 56.2 | 6e-93 | 283 |
| LLPS-Scp-1542 | Schizosaccharomyces pombe | 56.2 | 2e-91 | 278 |
| LLPS-Scm-3646 | Scophthalmus maximus | 56.16 | 2e-104 | 312 |
| LLPS-Ict-0809 | Ictidomys tridecemlineatus | 55.8 | 2e-105 | 315 |
| LLPS-Sah-2518 | Sarcophilus harrisii | 55.8 | 4e-105 | 314 |
| LLPS-Blg-1128 | Blumeria graminis | 55.79 | 7e-93 | 282 |
| LLPS-Scc-1073 | Schizosaccharomyces cryophilus | 55.79 | 8e-92 | 280 |
| LLPS-Cogr-1415 | Colletotrichum graminicola | 55.64 | 1e-97 | 294 |
| LLPS-Cog-1283 | Colletotrichum gloeosporioides | 55.64 | 7e-97 | 293 |
| LLPS-Coo-0858 | Colletotrichum orbiculare | 55.64 | 3e-97 | 293 |
| LLPS-Dos-1186 | Dothistroma septosporum | 55.51 | 2e-95 | 289 |
| LLPS-Ved-0669 | Verticillium dahliae | 55.43 | 2e-99 | 299 |
| LLPS-Pes-2599 | Pelodiscus sinensis | 55.43 | 4e-100 | 301 |
| LLPS-Fuo-0655 | Fusarium oxysporum | 55.16 | 1e-94 | 286 |
| LLPS-Fuv-1207 | Fusarium verticillioides | 55.16 | 2e-94 | 286 |
| LLPS-Asm-0699 | Astyanax mexicanus | 55.08 | 9e-94 | 285 |
| LLPS-Gaga-3399 | Gallus gallus | 55.07 | 1e-102 | 308 |
| LLPS-Mod-3816 | Monodelphis domestica | 55.07 | 2e-103 | 309 |
| LLPS-Phn-1568 | Phaeosphaeria nodorum | 54.9 | 3e-95 | 288 |
| LLPS-Zyt-1359 | Zymoseptoria tritici | 54.72 | 1e-94 | 287 |
| LLPS-Scs-0317 | Sclerotinia sclerotiorum | 54.72 | 9e-94 | 285 |
| LLPS-Cym-0496 | Cyanidioschyzon merolae | 54.65 | 2e-93 | 284 |
| LLPS-Tum-1537 | Tuber melanosporum | 54.58 | 5e-96 | 290 |
| LLPS-Yal-0961 | Yarrowia lipolytica | 54.29 | 2e-87 | 268 |
| LLPS-Orl-2027 | Oryzias latipes | 54.23 | 7e-105 | 313 |
| LLPS-Pytr-0638 | Pyrenophora triticirepentis | 54.12 | 3e-93 | 283 |
| LLPS-Pyt-1257 | Pyrenophora teres | 54.12 | 1e-93 | 285 |
| LLPS-Kop-1259 | Komagataella pastoris | 54.02 | 4e-93 | 283 |
| LLPS-Mao-1010 | Magnaporthe oryzae | 53.93 | 3e-96 | 291 |
| LLPS-Orc-0120 | Oryctolagus cuniculus | 53.68 | 8e-94 | 286 |
| LLPS-Gag-0688 | Gaeumannomyces graminis | 53.56 | 1e-97 | 295 |
| LLPS-Lac-2137 | Latimeria chalumnae | 53.38 | 2e-92 | 281 |
| LLPS-Sac-1530 | Saccharomyces cerevisiae | 53.31 | 3e-90 | 275 |
| LLPS-Map-1320 | Magnaporthe poae | 52.81 | 6e-96 | 290 |
| LLPS-Lem-0465 | Leptosphaeria maculans | 52.16 | 2e-90 | 276 |
| LLPS-Asg-0129 | Ashbya gossypii | 51.37 | 1e-84 | 261 |
| LLPS-Pof-4026 | Poecilia formosa | 48.51 | 6e-82 | 254 |
| LLPS-Ten-3698 | Tetraodon nigroviridis | 48.34 | 8e-83 | 256 |
| LLPS-Cae-0049 | Caenorhabditis elegans | 48.11 | 2e-65 | 212 |
| LLPS-Mam-4073 | Macaca mulatta | 46.43 | 9e-30 | 115 |
| LLPS-Ora-0650 | Ornithorhynchus anatinus | 45.11 | 6e-73 | 231 |
| LLPS-Via-1023 | Vigna angularis | 34.25 | 4e-27 | 110 |