Solanum lycopersicum      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 355 genes.  Reviewed (0 or Unreviewed (355

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sol-0004
Solyc02g062620.3
2
LLPS-Sol-0009
Solyc04g074300.3
3
LLPS-Sol-0013
Solyc08g077700.3
4
LLPS-Sol-0016
Solyc02g070510.3
5
LLPS-Sol-0017
Solyc09g065330.3
6
LLPS-Sol-0019
Solyc02g082190.3
7
LLPS-Sol-0026
Solyc09g007940.3
8
LLPS-Sol-0033
Solyc01g028930.3
9
LLPS-Sol-0035
Solyc09g010500.3
10
LLPS-Sol-0038
Solyc02g081680.3
11
LLPS-Sol-0045
Solyc01g094540.3
12
LLPS-Sol-0047
Solyc03g007430.3
13
LLPS-Sol-0048
Solyc04g064700.3
14
LLPS-Sol-0059
Solyc05g053220.3
15
LLPS-Sol-0061
Solyc01g100720.3
16
LLPS-Sol-0062
Solyc01g005960.3
17
LLPS-Sol-0064
Solyc10g006470.3
18
LLPS-Sol-0069
Solyc01g110530.3
19
LLPS-Sol-0072
Solyc02g079110.3
20
LLPS-Sol-0079
Solyc10g078860.2
21
LLPS-Sol-0096
Solyc07g017660.2
22
LLPS-Sol-0104
Solyc01g102370.3
23
LLPS-Sol-0114
Solyc02g078120.2
24
LLPS-Sol-0120
Solyc07g006790.3
25
LLPS-Sol-0127
Solyc02g021550.3
26
LLPS-Sol-0129
Solyc09g097830.3
27
LLPS-Sol-0141
Solyc02g068420.3
28
LLPS-Sol-0147
Solyc08g016420.3
29
LLPS-Sol-0149
Solyc01g097110.2
30
LLPS-Sol-0160
Solyc08g076660.3
31
LLPS-Sol-0164
Solyc08g061850.3
32
LLPS-Sol-0166
Solyc04g016380.3
33
LLPS-Sol-0173
Solyc07g054140.3
34
LLPS-Sol-0175
Solyc01g100650.3
35
LLPS-Sol-0185
Solyc03g119790.3
36
LLPS-Sol-0189
Solyc04g007560.3
37
LLPS-Sol-0195
Solyc07g049480.3
38
LLPS-Sol-0197
Solyc10g005530.3
39
LLPS-Sol-0199
Solyc03g063220.2
40
LLPS-Sol-0201
Solyc06g074720.3
41
LLPS-Sol-0206
Solyc01g088370.3
42
LLPS-Sol-0212
Solyc06g053385.1
43
LLPS-Sol-0215
Solyc03g082920.3
44
LLPS-Sol-0220
Solyc04g074490.3
45
LLPS-Sol-0239
Solyc10g081030.2
46
LLPS-Sol-0242
Solyc01g008270.3
47
LLPS-Sol-0253
Solyc03g051900.3
48
LLPS-Sol-0255
Solyc03g114690.3
49
LLPS-Sol-0260
Solyc07g065950.3
50
LLPS-Sol-0266
Solyc02g089280.3
51
LLPS-Sol-0268
Solyc12g095860.2
52
LLPS-Sol-0276
Solyc05g017893.1
53
LLPS-Sol-0283
Solyc03g118350.3
54
LLPS-Sol-0286
Solyc06g005670.3
55
LLPS-Sol-0287
Solyc01g088080.3
56
LLPS-Sol-0288
Solyc03g032070.3
57
LLPS-Sol-0291
Solyc12g099890.2
58
LLPS-Sol-0295
Solyc06g071470.3
59
LLPS-Sol-0302
Solyc02g069340.3
60
LLPS-Sol-0303
Solyc09g048990.3
61
LLPS-Sol-0305
Solyc11g071910.2
62
LLPS-Sol-0312
Solyc05g054810.3
63
LLPS-Sol-0316
Solyc12g099910.2
64
LLPS-Sol-0317
Solyc01g110130.3
65
LLPS-Sol-0323
Solyc11g009090.2
66
LLPS-Sol-0326
Solyc03g062650.3
67
LLPS-Sol-0327
Solyc02g038750.3
68
LLPS-Sol-0331
Solyc03g123730.3
69
LLPS-Sol-0347
Solyc09g059310.3
70
LLPS-Sol-0349
Solyc03g113780.3
71
LLPS-Sol-0350
Solyc06g053210.3
72
LLPS-Sol-0353
Solyc12g008760.2
73
LLPS-Sol-0357
Solyc10g080180.2
74
LLPS-Sol-0366
Solyc08g078070.3
75
LLPS-Sol-0368
Solyc03g019780.3
76
LLPS-Sol-0372
Solyc02g066830.3
77
LLPS-Sol-0375
Solyc01g079507.1
78
LLPS-Sol-0377
Solyc01g068240.3
79
LLPS-Sol-0412
Solyc11g039830.2
80
LLPS-Sol-0413
Solyc03g112820.3
81
LLPS-Sol-0419
Solyc06g074980.3
82
LLPS-Sol-0420
Solyc09g061430.3
83
LLPS-Sol-0421
Solyc01g095710.3
84
LLPS-Sol-0424
Solyc00g007270.3
85
LLPS-Sol-0426
Solyc09g005760.3
86
LLPS-Sol-0428
Solyc02g091790.3
87
LLPS-Sol-0435
Solyc03g007100.3
88
LLPS-Sol-0452
Solyc09g066495.1
89
LLPS-Sol-0467
Solyc03g093260.3
90
LLPS-Sol-0491
Solyc12g015780.2
91
LLPS-Sol-0494
Solyc08g076335.1
92
LLPS-Sol-0514
Solyc12g095960.2
93
LLPS-Sol-0529
Solyc11g008670.2
94
LLPS-Sol-0530
Solyc06g060780.3
Q84V30
95
LLPS-Sol-0540
Solyc02g093390.3
96
LLPS-Sol-0543
Solyc03g122110.1
97
LLPS-Sol-0558
Solyc01g099300.3
98
LLPS-Sol-0561
Solyc07g005050.3
99
LLPS-Sol-0565
Solyc01g107870.3
100
LLPS-Sol-0574
Solyc03g098280.3
101
LLPS-Sol-0579
Solyc09g007540.3
102
LLPS-Sol-0590
Solyc10g039190.2
103
LLPS-Sol-0603
Solyc03g118010.3
104
LLPS-Sol-0604
Solyc10g047000.2
105
LLPS-Sol-0607
Solyc01g103800.3
106
LLPS-Sol-0612
Solyc11g005110.2
107
LLPS-Sol-0616
Solyc05g056160.3
108
LLPS-Sol-0621
Solyc07g008880.3
109
LLPS-Sol-0630
Solyc02g070310.3
110
LLPS-Sol-0640
Solyc09g091520.2
111
LLPS-Sol-0644
Solyc12g008750.2
112
LLPS-Sol-0648
Solyc11g069150.2
113
LLPS-Sol-0658
Solyc01g103720.3
114
LLPS-Sol-0666
Solyc06g034160.3
115
LLPS-Sol-0679
Solyc12g056110.2
116
LLPS-Sol-0686
Solyc04g079200.3
117
LLPS-Sol-0687
Solyc09g005640.3
118
LLPS-Sol-0693
Solyc06g071770.3
119
LLPS-Sol-0709
Solyc12g006010.2
120
LLPS-Sol-0710
Solyc01g068390.3
121
LLPS-Sol-0716
Solyc01g067830.3
122
LLPS-Sol-0724
Solyc01g094000.3
123
LLPS-Sol-0727
Solyc07g049590.3
124
LLPS-Sol-0732
Solyc01g111450.3
125
LLPS-Sol-0733
Solyc01g094350.3
126
LLPS-Sol-0742
Solyc04g064560.3
127
LLPS-Sol-0751
Solyc04g010290.3
128
LLPS-Sol-0759
Solyc11g062270.2
129
LLPS-Sol-0764
Solyc11g020810.2
130
LLPS-Sol-0774
Solyc12g006550.2
131
LLPS-Sol-0775
Solyc06g071200.3
132
LLPS-Sol-0781
Solyc03g114370.3
133
LLPS-Sol-0783
Solyc03g119040.3
134
LLPS-Sol-0793
Solyc06g073330.3
135
LLPS-Sol-0799
Solyc10g005560.3
136
LLPS-Sol-0814
Solyc12g062870.2
137
LLPS-Sol-0816
Solyc02g067970.3
138
LLPS-Sol-0832
Solyc06g075590.3
139
LLPS-Sol-0837
Solyc10g008180.2
140
LLPS-Sol-0841
Solyc09g009040.3
141
LLPS-Sol-0850
Solyc02g081700.1
142
LLPS-Sol-0856
Solyc12g044730.2
143
LLPS-Sol-0858
Solyc08g007520.3
144
LLPS-Sol-0861
Solyc09g005330.3
145
LLPS-Sol-0864
Solyc11g017070.2
146
LLPS-Sol-0875
Solyc03g116730.3
147
LLPS-Sol-0880
Solyc03g117970.3
148
LLPS-Sol-0887
Solyc01g099900.3
149
LLPS-Sol-0891
Solyc03g093680.3
K4BIP4
150
LLPS-Sol-0892
Solyc08g006700.3
151
LLPS-Sol-0909
Solyc04g077920.3
152
LLPS-Sol-0915
Solyc12g056940.2
153
LLPS-Sol-0927
Solyc11g069370.2
154
LLPS-Sol-0930
Solyc11g007940.2
155
LLPS-Sol-0934
Solyc01g100430.3
156
LLPS-Sol-0956
Solyc05g054630.3
157
LLPS-Sol-0961
Solyc01g111710.3
158
LLPS-Sol-0963
Solyc03g115810.3
159
LLPS-Sol-0969
Solyc09g064660.3
160
LLPS-Sol-0970
Solyc02g093900.3
161
LLPS-Sol-0973
Solyc06g074210.3
162
LLPS-Sol-0975
Solyc01g095410.3
163
LLPS-Sol-0981
Solyc01g106770.3
164
LLPS-Sol-0993
Solyc09g010460.3
165
LLPS-Sol-1044
Solyc06g082650.3
166
LLPS-Sol-1045
Solyc12g044640.2
167
LLPS-Sol-1047
Solyc02g082180.3
168
LLPS-Sol-1072
Solyc01g109960.3
169
LLPS-Sol-1073
Solyc01g044360.3
170
LLPS-Sol-1077
Solyc03g097290.3
171
LLPS-Sol-1082
Solyc01g096800.3
172
LLPS-Sol-1092
Solyc03g117030.2
173
LLPS-Sol-1096
Solyc04g081280.3
174
LLPS-Sol-1102
Solyc10g078450.2
175
LLPS-Sol-1108
Solyc10g054560.2
O24011
176
LLPS-Sol-1120
Solyc08g062800.3
177
LLPS-Sol-1123
Solyc06g069280.3
178
LLPS-Sol-1133
Solyc09g010190.3
179
LLPS-Sol-1136
Solyc03g111630.3
180
LLPS-Sol-1161
Solyc07g007690.3
181
LLPS-Sol-1166
Solyc10g080560.2
182
LLPS-Sol-1167
Solyc09g082320.3
183
LLPS-Sol-1168
Solyc07g065550.3
184
LLPS-Sol-1171
Solyc06g073120.3
185
LLPS-Sol-1172
Solyc10g055670.2
186
LLPS-Sol-1181
Solyc05g050680.3
187
LLPS-Sol-1188
Solyc06g050770.3
188
LLPS-Sol-1191
Solyc03g095840.3
189
LLPS-Sol-1198
Solyc06g071870.3
190
LLPS-Sol-1225
Solyc01g097640.3
191
LLPS-Sol-1237
Solyc05g009600.3
192
LLPS-Sol-1241
Solyc04g057880.3
193
LLPS-Sol-1246
Solyc07g016200.3
194
LLPS-Sol-1253
Solyc01g112150.3
195
LLPS-Sol-1262
Solyc04g063280.3
196
LLPS-Sol-1268
Solyc09g091280.3
197
LLPS-Sol-1273
Solyc01g094480.3
198
LLPS-Sol-1284
Solyc12g010520.2
199
LLPS-Sol-1297
Solyc06g053590.3
200
LLPS-Sol-1299
Solyc01g099760.3
201
LLPS-Sol-1301
Solyc05g009980.3
202
LLPS-Sol-1303
Solyc01g087095.1
203
LLPS-Sol-1315
Solyc10g081170.2
204
LLPS-Sol-1322
Solyc10g079880.2
205
LLPS-Sol-1325
Solyc11g071660.1
206
LLPS-Sol-1327
Solyc05g013820.3
207
LLPS-Sol-1331
Solyc01g095040.3
208
LLPS-Sol-1347
Solyc07g007210.3
209
LLPS-Sol-1366
Solyc01g102970.3
210
LLPS-Sol-1369
Solyc08g061000.3
211
LLPS-Sol-1376
Solyc06g005865.1
212
LLPS-Sol-1383
Solyc03g120010.3
213
LLPS-Sol-1385
Solyc06g053800.2
214
LLPS-Sol-1387
Solyc01g111780.3
215
LLPS-Sol-1398
Solyc04g012060.3
216
LLPS-Sol-1413
Solyc06g063000.3
217
LLPS-Sol-1414
Solyc01g096580.3
218
LLPS-Sol-1423
Solyc01g005430.3
219
LLPS-Sol-1441
Solyc02g085420.3
220
LLPS-Sol-1442
Solyc04g074910.3
221
LLPS-Sol-1449
Solyc01g098870.3
222
LLPS-Sol-1460
Solyc06g061120.3
223
LLPS-Sol-1471
Solyc11g040120.2
224
LLPS-Sol-1484
Solyc02g089890.3
225
LLPS-Sol-1487
Solyc07g008760.3
226
LLPS-Sol-1501
Solyc04g063290.3
227
LLPS-Sol-1502
Solyc07g056540.3
228
LLPS-Sol-1505
Solyc09g010330.3
229
LLPS-Sol-1511
Solyc01g010540.3
230
LLPS-Sol-1514
Solyc11g072880.2
231
LLPS-Sol-1518
Solyc11g005600.2
232
LLPS-Sol-1521
Solyc05g008480.3
233
LLPS-Sol-1545
Solyc11g013520.2
234
LLPS-Sol-1571
Solyc07g065900.3
235
LLPS-Sol-1577
Solyc01g102570.3
236
LLPS-Sol-1585
Solyc11g066480.2
237
LLPS-Sol-1588
Solyc08g074790.3
238
LLPS-Sol-1596
Solyc08g081280.3
239
LLPS-Sol-1599
Solyc01g106020.3
240
LLPS-Sol-1608
Solyc06g071530.3
241
LLPS-Sol-1623
Solyc10g081020.2
242
LLPS-Sol-1625
Solyc01g066610.3
243
LLPS-Sol-1630
Solyc06g007870.3
244
LLPS-Sol-1636
Solyc09g005100.3
245
LLPS-Sol-1637
Solyc06g076460.3
246
LLPS-Sol-1650
Solyc03g111380.3
247
LLPS-Sol-1659
Solyc01g110410.3
248
LLPS-Sol-1673
Solyc05g055160.3
249
LLPS-Sol-1676
Solyc11g005800.2
250
LLPS-Sol-1678
Solyc03g044140.3
251
LLPS-Sol-1680
Solyc08g005970.3
252
LLPS-Sol-1684
Solyc11g013440.2
253
LLPS-Sol-1693
Solyc05g005610.3
254
LLPS-Sol-1694
Solyc11g068870.2
255
LLPS-Sol-1725
Solyc03g118020.3
256
LLPS-Sol-1748
Solyc09g090200.3
257
LLPS-Sol-1755
Solyc08g074550.3
258
LLPS-Sol-1769
Solyc07g065930.3
259
LLPS-Sol-1771
Solyc02g082460.3
260
LLPS-Sol-1778
Solyc10g038120.2
261
LLPS-Sol-1787
Solyc04g076390.3
262
LLPS-Sol-1797
Solyc03g121140.3
263
LLPS-Sol-1798
Solyc09g014320.3
264
LLPS-Sol-1802
Solyc02g081810.3
265
LLPS-Sol-1811
Solyc04g082320.3
266
LLPS-Sol-1812
Solyc01g090780.3
267
LLPS-Sol-1824
Solyc01g104920.3
268
LLPS-Sol-1834
Solyc12g021190.2
269
LLPS-Sol-1839
Solyc12g049570.2
270
LLPS-Sol-1852
Solyc03g115230.3
271
LLPS-Sol-1860
Solyc10g078950.2
272
LLPS-Sol-1861
Solyc07g052175.1
273
LLPS-Sol-1874
Solyc06g062980.3
274
LLPS-Sol-1876
Solyc03g115470.3
275
LLPS-Sol-1893
Solyc11g044965.1
276
LLPS-Sol-1906
Solyc03g005740.2
277
LLPS-Sol-1907
Solyc10g045390.2
278
LLPS-Sol-1911
Solyc11g068930.2
279
LLPS-Sol-1921
Solyc01g091500.3
280
LLPS-Sol-1927
Solyc07g055695.1
281
LLPS-Sol-1930
Solyc02g094160.1
282
LLPS-Sol-1934
Solyc06g054080.3
283
LLPS-Sol-1936
Solyc06g051270.3
284
LLPS-Sol-1937
Solyc04g009410.3
285
LLPS-Sol-1956
Solyc05g015630.3
286
LLPS-Sol-1962
Solyc06g065590.3
287
LLPS-Sol-1966
Solyc02g093830.3
288
LLPS-Sol-1982
Solyc06g063330.3
289
LLPS-Sol-2000
Solyc08g082200.3
290
LLPS-Sol-2004
Solyc11g007170.2
291
LLPS-Sol-2007
Solyc04g078620.3
292
LLPS-Sol-2008
Solyc12g089030.2
293
LLPS-Sol-2032
Solyc01g098180.3
294
LLPS-Sol-2037
Solyc08g062915.1
295
LLPS-Sol-2041
Solyc08g080170.3
296
LLPS-Sol-2046
Solyc01g087120.3
297
LLPS-Sol-2048
Solyc06g008330.2
298
LLPS-Sol-2066
Solyc09g082670.3
299
LLPS-Sol-2081
Solyc01g099830.3
300
LLPS-Sol-2082
Solyc03g025540.3
301
LLPS-Sol-2097
Solyc03g111730.3
302
LLPS-Sol-2112
Solyc03g120780.3
303
LLPS-Sol-2117
Solyc05g013790.3
304
LLPS-Sol-2146
Solyc04g080590.3
305
LLPS-Sol-2164
Solyc01g066590.3
306
LLPS-Sol-2184
Solyc06g082630.3
307
LLPS-Sol-2198
Solyc07g032080.3
308
LLPS-Sol-2200
Solyc12g098910.2
309
LLPS-Sol-2221
Solyc09g097880.3
310
LLPS-Sol-2224
Solyc04g008610.3
311
LLPS-Sol-2227
Solyc02g091110.3
312
LLPS-Sol-2265
Solyc02g069790.3
313
LLPS-Sol-2273
Solyc01g112350.3
314
LLPS-Sol-2279
Solyc08g068810.3
315
LLPS-Sol-2283
Solyc08g007360.3
316
LLPS-Sol-2288
Solyc03g115050.3
317
LLPS-Sol-2293
Solyc12g015660.2
318
LLPS-Sol-2307
Solyc01g111870.2
319
LLPS-Sol-2317
Solyc11g020890.2
320
LLPS-Sol-2332
Solyc02g061650.2
321
LLPS-Sol-2366
Solyc07g005090.3
322
LLPS-Sol-2370
Solyc06g053460.2
323
LLPS-Sol-2387
Solyc06g065170.3
324
LLPS-Sol-2414
Solyc06g076860.3
325
LLPS-Sol-2431
Solyc05g006590.3
326
LLPS-Sol-2453
Solyc03g120670.3
327
LLPS-Sol-2468
Solyc12g088680.2
328
LLPS-Sol-2484
Solyc03g118620.3
329
LLPS-Sol-2485
Solyc05g007755.1
330
LLPS-Sol-2494
Solyc12g088810.2
331
LLPS-Sol-2501
Solyc06g067880.3
332
LLPS-Sol-2518
Solyc02g084360.3
333
LLPS-Sol-2523
Solyc06g082220.3
334
LLPS-Sol-1367
Solyc07g064680.3
F1JYZ5
100736468
335
LLPS-Sol-0447
Solyc06g071210.3
Q56R02
101246352
336
LLPS-Sol-0711
Solyc11g065670.1
K4DAA0
101247691
337
LLPS-Sol-0474
Solyc02g021400.2
K4B4Z0
101248825
338
LLPS-Sol-1204
Solyc10g084310.2
K4D3L7
101252449
339
LLPS-Sol-2057
Solyc12g099820.1
K4DI03
101254464
340
LLPS-Sol-0551
Solyc12g056490.1
K4DFY0
101257937
341
LLPS-Sol-1345
Solyc02g086240.3
K4CG62
101259713
342
LLPS-Sol-2371
Solyc10g011740.3
K4CYF2
101260872
343
LLPS-Sol-0559
Solyc06g073790.3
K4C998
101266035
344
LLPS-Sol-0022
Solyc02g084920.3
K4BB06
101266585
345
LLPS-Sol-1999
Solyc03g115700.3
Q6XNM3
543870
346
LLPS-Sol-0851
Solyc10g006290.3
A0RZC9
CHRD
347
LLPS-Sol-2024
Solyc01g098610.3
E1U7P9
GSH2
348
LLPS-Sol-0008
Solyc12g019460.2
Q84MI6
MPK1
349
LLPS-Sol-1594
Solyc05g023800.3
P38546
RAN1
350
LLPS-Sol-0903
Solyc08g062660.3
Q94K24
RanBP1
351
LLPS-Sol-0890
Solyc06g065475.1
K4C7H6
RBM8
352
LLPS-Sol-0338
Solyc02g078260.3
Q42877
RPB2
353
LLPS-Sol-1890
Solyc10g083165.1
P49215
RPS17
354
LLPS-Sol-1067
Solyc05g053835.1
Q8RVB2
SPY
355
LLPS-Sol-1030
Solyc09g059970.3
Q9SMD1
sumo