Brassica oleracea      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 384 genes.  Reviewed (0 or Unreviewed (384

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Bro-0063
Bo3g060990
A0A0D3BA36
2
LLPS-Bro-0066
Bo7g110500
A0A0D3DG51
3
LLPS-Bro-0068
Bo1g147450
A0A0D3AF64
4
LLPS-Bro-0085
Bo3g138620
A0A0D3BI49
5
LLPS-Bro-0100
Bo7g067210
A0A0D3D8V5
6
LLPS-Bro-0109
Bo4g024400
A0A0D3BQ12
7
LLPS-Bro-0150
Bo00911s060
A0A0D2ZS62
8
LLPS-Bro-0162
Bo7g115390
A0A0D3DH91
9
LLPS-Bro-0270
Bo9g032610
A0A0D3E4B7
10
LLPS-Bro-0283
Bo8g025650
A0A0D3DKH5
11
LLPS-Bro-0297
Bo4g196100
A0A0D3C6J7
12
LLPS-Bro-0358
Bo1g108930
A0A0D3AC34
13
LLPS-Bro-0366
Bo9g161730
A0A0D3EEX2
14
LLPS-Bro-0390
Bo9g024560
A0A0D3E358
15
LLPS-Bro-0395
Bo4g012550
A0A0D3BNW9
16
LLPS-Bro-0471
Bo9g183540
A0A0D3EIB3
17
LLPS-Bro-0530
Bo3g064860
A0A0D3BAX4
18
LLPS-Bro-0587
Bo8g118240
A0A0D3DZH8
19
LLPS-Bro-0598
Bo3g178370
A0A0D3BME8
20
LLPS-Bro-0659
Bo1g007770
A0A0D3A251
21
LLPS-Bro-0671
Bo3g184270
A0A0D3BMZ2
22
LLPS-Bro-0725
Bo1g082420
A0A0D3A9L5
23
LLPS-Bro-0747
Bo9g177510
A0A0D3EHQ6
24
LLPS-Bro-0752
Bo2g010070
A0A0D3AIH4
25
LLPS-Bro-0899
Bo8g090610
A0A0D3DTK8
26
LLPS-Bro-1005
Bo5g023810
A0A0D3CB18
27
LLPS-Bro-1054
Bo3g101590
A0A0D3BF69
28
LLPS-Bro-1112
Bo1g152160
A0A0D3AFN8
29
LLPS-Bro-1146
Bo6g098940
A0A0D3CY38
30
LLPS-Bro-1159
Bo1g037820
A0A0D3A5X3
31
LLPS-Bro-1177
Bo6g121920
A0A0D3D1J7
32
LLPS-Bro-1271
Bo3g087190
A0A0D3BDM0
33
LLPS-Bro-1388
Bo2g041180
A0A0D3AM04
34
LLPS-Bro-1400
Bo1g002340
A0A0D3A0V7
35
LLPS-Bro-1413
Bo2g141730
A0A0D3AW77
36
LLPS-Bro-1439
Bo3g184290
A0A0D3BMZ4
37
LLPS-Bro-1471
Bo2g010060
A0A0D3AIH3
38
LLPS-Bro-1496
Bo9g014430
A0A0D3E1P0
39
LLPS-Bro-1554
Bo2g005270
A0A0D3AHP2
40
LLPS-Bro-1630
Bo5g003730
A0A0D3C7A4
41
LLPS-Bro-1678
Bo3g064500
A0A0D3BAT8
42
LLPS-Bro-1679
Bo6g121240
A0A0D3D1C9
43
LLPS-Bro-1705
Bo4g145640
A0A0D3C0X0
44
LLPS-Bro-1770
Bo2g023840
A0A0D3AKF8
45
LLPS-Bro-1789
Bo4g016140
A0A0D3BPD0
46
LLPS-Bro-1802
Bo7g097780
A0A0D3DDC7
47
LLPS-Bro-1848
Bo5g141350
A0A0D3CM01
48
LLPS-Bro-2096
Bo8g019190
A0A0D3DK24
49
LLPS-Bro-2218
Bo8g112860
A0A0D3DYI8
50
LLPS-Bro-2259
Bo7g117020
A0A0D3DHQ4
51
LLPS-Bro-2320
Bo6g035960
A0A0D3CR51
52
LLPS-Bro-2365
Bo5g002440
A0A0D3C6X5
53
LLPS-Bro-2399
Bo3g185720
A0A0D3BND7
54
LLPS-Bro-2536
Bo1g051030
A0A0D3A753
55
LLPS-Bro-2547
Bo5g029060
A0A0D3DQH4
56
LLPS-Bro-2624
Bo5g008960
A0A0D3C8H8
57
LLPS-Bro-2682
Bo1g045330
A0A0D3A6M9
58
LLPS-Bro-2807
Bo3g139990
A0A0D3BI87
59
LLPS-Bro-2915
Bo2g080450
A0A0D3AQA9
60
LLPS-Bro-2919
Bo9g185050
A0A0D3EIG5
61
LLPS-Bro-0547
Bo5g132650
A0A0D3CKM7
106292521
62
LLPS-Bro-0686
Bo5g132750
A0A0D3CKN7
106292523
63
LLPS-Bro-1393
Bo5g020930
A0A0D3CAH9
106292579
64
LLPS-Bro-0753
Bo5g101130
A0A0D3CHK4
106292593
65
LLPS-Bro-1547
Bo5g139630
A0A0D3CLS8
106292873
66
LLPS-Bro-2361
Bo5g126440
A0A0D3CJQ3
106292992
67
LLPS-Bro-0851
Bo5g134800
A0A0D3CKZ3
106293067
68
LLPS-Bro-0739
Bo1g114740
A0A0D3ACC0
106293355
69
LLPS-Bro-0435
Bo5g003410
A0A0D3C772
106293451
70
LLPS-Bro-2827
Bo5g141200
A0A0D3CLY6
106293461
71
LLPS-Bro-2456
Bo5g138060
A0A0D3CLM0
106293567
72
LLPS-Bro-0905
Bo5g148050
A0A0D3CMS5
106293793
73
LLPS-Bro-2818
Bo5g141550
A0A0D3CM21
106294377
74
LLPS-Bro-3009
Bo5g001330
A0A0D3C6W3
106294423
75
LLPS-Bro-1783
Bo5g133130
A0A0D3CKS5
106294541
76
LLPS-Bro-0211
Bo5g127090
A0A0D3CJW8
106294673
77
LLPS-Bro-0235
Bo5g020570
A0A0D3CAE3
106294986
78
LLPS-Bro-0533
Bo5g131730
A0A0D3CKD5
106295059
79
LLPS-Bro-1987
Bo5g121440
A0A0D3CJ50
106295169
80
LLPS-Bro-0342
Bo5g134970
A0A0D3CL10
106295269
81
LLPS-Bro-0207
Bo5g133450
A0A0D3CKV7
106295382
82
LLPS-Bro-1163
Bo5g061150
A0A0D3CEM7
106295386
83
LLPS-Bro-0750
Bo5g111240
A0A0D3CI73
106295486
84
LLPS-Bro-1829
Bo5g094630
A0A0D3CH49
106295695
85
LLPS-Bro-0193
Bo5g108440
A0A0D3CHZ1
106295998
86
LLPS-Bro-0251
Bo5g064420
A0A0D3CF06
106296079
87
LLPS-Bro-2544
Bo5g007540
A0A0D3C836
106296090
88
LLPS-Bro-0561
Bo6g074910
A0A0D3CUM3
106296342
89
LLPS-Bro-0197
Bo6g115860
A0A0D3D040
106296549
90
LLPS-Bro-2108
Bo6g051050
A0A0D3CSC1
106296709
91
LLPS-Bro-0449
Bo6g099310
A0A0D3CY75
106296747
92
LLPS-Bro-2981
Bo6g115830
A0A0D3D037
106296808
93
LLPS-Bro-0396
Bo3g031560
A0A0D3CTL2
106296820
94
LLPS-Bro-1691
Bo6g073220
A0A0D3CUF3
106296880
95
LLPS-Bro-0107
Bo6g077340
A0A0D3CV17
106298283
96
LLPS-Bro-1842
Bo6g026030
A0A0D3CQ02
106298298
97
LLPS-Bro-2061
Bo6g101230
A0A0D3CYG8
106298302
98
LLPS-Bro-0126
Bo6g051360
A0A0D3CSF2
106298316
99
LLPS-Bro-0117
Bo6g067050
A0A0D3CTI3
106298354
100
LLPS-Bro-2598
Bo6g084990
A0A0D3CWD5
106298813
101
LLPS-Bro-0657
Bo6g124130
A0A0D3D1W9
106299607
102
LLPS-Bro-1095
Bo6g081090
A0A0D3CVU3
106299644
103
LLPS-Bro-1516
Bo6g074830
A0A0D3CUL5
106299857
104
LLPS-Bro-0579
Bo6g118620
A0A0D3D0L7
106299879
105
LLPS-Bro-0073
Bo6g043960
A0A0D3CRQ7
106299967
106
LLPS-Bro-2761
Bo6g066870
A0A0D3CTG5
106299982
107
LLPS-Bro-1225
Bo6g099280
A0A0D3CY72
106300009
108
LLPS-Bro-2543
Bo6g019850
A0A0D3CPM9
106300015
109
LLPS-Bro-1589
Bo6g104050
A0A0D3CYQ2
106300173
110
LLPS-Bro-0351
Bo6g110630
A0A0D3CZG4
106300240
111
LLPS-Bro-1639
Bo6g081280
A0A0D3CVW2
106300245
112
LLPS-Bro-1951
Bo6g100960
A0A0D3CYE1
106300288
113
LLPS-Bro-1120
Bo6g085070
A0A0D3CWE3
106300346
114
LLPS-Bro-2608
Bo1g144970
A0A0D3AF14
106300371
115
LLPS-Bro-2582
Bo6g056330
A0A0D3CSQ3
106300421
116
LLPS-Bro-1397
Bo6g081460
A0A0D3CVY0
106300466
117
LLPS-Bro-2304
Bo6g018400
A0A0D3CPI3
106300511
118
LLPS-Bro-1945
Bo6g125830
A0A0D3D240
106300614
119
LLPS-Bro-0062
Bo6g051030
A0A0D3CSB9
106300659
120
LLPS-Bro-0542
Bo6g064730
A0A0D3CT50
106300865
121
LLPS-Bro-1474
Bo6g120010
A0A0D3D106
106300871
122
LLPS-Bro-0603
Bo6g018680
A0A0D3CPL1
106301121
123
LLPS-Bro-0850
Bo7g067790
A0A0D3D913
106301166
124
LLPS-Bro-0298
Bo7g093510
A0A0D3DCE9
106301286
125
LLPS-Bro-0813
Bo7g040960
A0A0D3D5L5
106301430
126
LLPS-Bro-0008
Bo7g104120
A0A0D3DEB4
106301618
127
LLPS-Bro-1434
Bo7g049730
A0A0D3D6E8
106301705
128
LLPS-Bro-1045
Bo7g030410
A0A0D3D4K3
106301851
129
LLPS-Bro-0121
Bo1g144260
A0A0D3AEU3
106302967
130
LLPS-Bro-1962
Bo7g048520
A0A0D3D6C6
106303584
131
LLPS-Bro-1836
Bo7g118170
A0A0D3DI19
106303762
132
LLPS-Bro-0370
Bo7g059870
A0A0D3D7L8
106303809
133
LLPS-Bro-1143
Bo1g019210
A0A0D3A400
106304005
134
LLPS-Bro-2118
Bo7g115540
A0A0D3DHA6
106304517
135
LLPS-Bro-0528
Bo7g061870
A0A0D3D7W9
106305535
136
LLPS-Bro-0382
Bo7g114550
A0A0D3DH07
106305832
137
LLPS-Bro-0137
Bo7g075870
A0A0D3D9M7
106305836
138
LLPS-Bro-1781
Bo1g022050
A0A0D3A4I5
106305874
139
LLPS-Bro-1335
Bo7g084570
A0A0D3DBA0
106305944
140
LLPS-Bro-2655
Bo7g087040
A0A0D3DBE9
106305994
141
LLPS-Bro-0525
Bo7g104100
A0A0D3DEB2
106306101
142
LLPS-Bro-0936
Bo7g026500
A0A0D3D4A9
106306133
143
LLPS-Bro-1604
Bo7g033050
A0A0D3D518
106306139
144
LLPS-Bro-1155
Bo7g029030
A0A0D3D4G4
106306193
145
LLPS-Bro-0917
Bo1g024430
A0A0D3A4X4
106306208
146
LLPS-Bro-0709
Bo1g025590
A0A0D3A4Z1
106306284
147
LLPS-Bro-2724
Bo7g040320
A0A0D3D5F1
106306348
148
LLPS-Bro-2326
Bo7g021560
A0A0D3D411
106306364
149
LLPS-Bro-1275
Bo7g044920
A0A0D3D5W4
106306386
150
LLPS-Bro-0389
Bo7g061670
A0A0D3D7U9
106306520
151
LLPS-Bro-1339
Bo7g052840
A0A0D3D6R1
106306524
152
LLPS-Bro-0108
Bo7g104500
A0A0D3DEF2
106306535
153
LLPS-Bro-1749
Bo7g067340
A0A0D3D8W8
106306554
154
LLPS-Bro-1432
Bo7g117650
A0A0D3DHW7
106306689
155
LLPS-Bro-1950
Bo7g070050
A0A0D3D941
106306761
156
LLPS-Bro-1626
Bo7g005600
A0A0D3D2K4
106306892
157
LLPS-Bro-2359
Bo7g098410
A0A0D3DDJ0
106306916
158
LLPS-Bro-0523
Bo7g097400
A0A0D3DD89
106306958
159
LLPS-Bro-0551
Bo7g078630
A0A0D3DA54
106307033
160
LLPS-Bro-0106
Bo8g077370
A0A0D3DRH8
106307195
161
LLPS-Bro-2324
Bo8g067650
A0A0D3DQ51
106307210
162
LLPS-Bro-0241
Bo8g081750
A0A0D3DSG7
106307211
163
LLPS-Bro-2555
Bo8g118150
A0A0D3DZG9
106307523
164
LLPS-Bro-1252
Bo8g095780
A0A0D3DUS6
106307629
165
LLPS-Bro-0812
Bo8g021740
A0A0D3DK81
106307783
166
LLPS-Bro-2444
Bo8g107630
A0A0D3DXL3
106307898
167
LLPS-Bro-2453
Bo8g038360
A0A0D3DLV4
106308124
168
LLPS-Bro-0319
Bo8g011170
A0A0D3DJG6
106308247
169
LLPS-Bro-1595
Bo8g054340
A0A0D3DNB3
106308265
170
LLPS-Bro-0178
Bo8g118290
A0A0D3DZI3
106308427
171
LLPS-Bro-0252
Bo8g107730
A0A0D3DXM3
106308446
172
LLPS-Bro-0182
Bo1g053350
A0A0D3A7I6
106308792
173
LLPS-Bro-1506
Bo1g017620
A0A0D3A3U0
106309111
174
LLPS-Bro-1596
Bo8g114470
A0A0D3DYQ0
106309394
175
LLPS-Bro-1188
Bo8g090890
A0A0D3DTN6
106309493
176
LLPS-Bro-0712
Bo8g049840
A0A0D3DML1
106309558
177
LLPS-Bro-0544
Bo8g016660
A0A0D3DJW9
106309741
178
LLPS-Bro-2246
Bo8g092280
A0A0D3DU25
106309756
179
LLPS-Bro-0506
Bo8g051440
A0A0D3DN21
106309891
180
LLPS-Bro-1033
Bo8g106860
A0A0D3DXD6
106309948
181
LLPS-Bro-2441
Bo8g037960
A0A0D3DLR4
106310099
182
LLPS-Bro-0266
Bo8g102900
A0A0D3DWI9
106310401
183
LLPS-Bro-1327
Bo8g106900
A0A0D3DXE0
106310882
184
LLPS-Bro-0793
Bo8g077540
A0A0D3DRJ5
106310994
185
LLPS-Bro-0261
Bo1g056730
A0A0D3A7X6
106311032
186
LLPS-Bro-1448
Bo8g058290
A0A0D3DNL1
106311548
187
LLPS-Bro-0423
Bo8g015090
A0A0D3DJR1
106311597
188
LLPS-Bro-0265
Bo1g031810
A0A0D3A5B8
106311618
189
LLPS-Bro-0359
Bo8g116100
A0A0D3DZ63
106311704
190
LLPS-Bro-0828
Bo8g066770
A0A0D3DPW3
106311719
191
LLPS-Bro-0870
Bo8g106690
A0A0D3DXB9
106311925
192
LLPS-Bro-0724
Bo8g114690
A0A0D3DYS2
106311954
193
LLPS-Bro-1642
Bo8g030800
A0A0D3DL43
106312099
194
LLPS-Bro-0403
Bo8g099580
A0A0D3DVK7
106312170
195
LLPS-Bro-0545
Bo8g096150
A0A0D3DUW3
106312175
196
LLPS-Bro-2052
Bo8g093240
A0A0D3DUC1
106312474
197
LLPS-Bro-0229
Bo8g109200
A0A0D3DY20
106312557
198
LLPS-Bro-0076
Bo8g102350
A0A0D3DWD4
106312568
199
LLPS-Bro-1494
Bo8g107590
A0A0D3DXK9
106312642
200
LLPS-Bro-0093
Bo1g090180
A0A0D3AA47
106312658
201
LLPS-Bro-1384
Bo8g039430
A0A0D3DLW2
106312680
202
LLPS-Bro-2631
Bo1g094380
A0A0D3AAH0
106312820
203
LLPS-Bro-0461
Bo1g094610
A0A0D3AAJ3
106312852
204
LLPS-Bro-2715
Bo9g010770
A0A0D3E172
106313135
205
LLPS-Bro-1128
Bo1g008460
A0A0D3A2C0
106313375
206
LLPS-Bro-2159
Bo9g120180
A0A0D3EB88
106313411
207
LLPS-Bro-0384
Bo9g088340
A0A0D3E8Y0
106313639
208
LLPS-Bro-1286
Bo9g173870
A0A0D3EGP2
106315498
209
LLPS-Bro-1886
Bo9g069560
A0A0D3E789
106315541
210
LLPS-Bro-0422
Bo9g022140
A0A0D3E2R5
106315808
211
LLPS-Bro-0373
Bo9g010100
A0A0D3E105
106315977
212
LLPS-Bro-2716
Bo9g137040
A0A0D3ECN6
106316125
213
LLPS-Bro-1696
Bo9g160080
A0A0D3EEQ6
106316164
214
LLPS-Bro-2455
Bo9g177580
A0A0D3EHR3
106317781
215
LLPS-Bro-2047
Bo9g010470
A0A0D3E142
106317920
216
LLPS-Bro-1495
Bo7g097590
A0A0D3E1K3
106317934
217
LLPS-Bro-1059
Bo9g022450
A0A0D3E2U6
106317988
218
LLPS-Bro-0309
Bo9g181780
A0A0D3EI36
106318053
219
LLPS-Bro-0016
Bo9g135160
A0A0D3ECE7
106318098
220
LLPS-Bro-1838
Bo1g008640
A0A0D3A2D8
106318163
221
LLPS-Bro-0695
Bo9g166570
A0A0D3EFQ8
106318232
222
LLPS-Bro-0198
Bo9g021700
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