Phaseolus vulgaris      Pyrenoid matrix


※ Pyrenoid matrix introduction

    Pyrenoids are non-membrane-bound, proteinaceous structures that contain a matrix packed with the CO2-fixing enzyme Rubisco. In many species, the matrix is traversed by membrane tubules that are continuous with the photosynthetic thylakoid membranes (1). Pyrenoids are a central feature of the algal CO2 concentrating mechanism, which supplies Rubisco with a high concentration of its substrate CO2, enabling more efficient carbon capture than that of most land plants. Pyrenoids are found within the chloroplasts of a diverse array of photosynthetic eukaryotes, including nearly all freshwater and marine algae, as well as a group of non-vascular plants (2).

Reference
1. Freeman R. E., Xu B., et al. (2017) The Eukaryotic CO2-Concentrating Organelle Is Liquid-like and Exhibits Dynamic Reorganization. Cell, 171(1), 148-162.e19. PMID: 28938114
2. Wang Y., et al. (2015) The CO2 concentrating mechanism and photosynthetic carbon assimilation in limiting CO2 : how Chlamydomonas works against the gradient. Plant J., 82(3), 429-48. PMID: 25765072


There are 45 genes.  Reviewed (0 or Unreviewed (45

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Phv-2182
PHAVU_003G289600g
V7CHU1
PFK
2
LLPS-Phv-a023
PHAVU_002G148700g
V7CLY4
PFK
3
LLPS-Phv-1999
PHAVU_001G148200g
V7CYM1
PHAVU_001G148200g
4
LLPS-Phv-1752
PHAVU_001G186000g
V7CXD6
PHAVU_001G186000g
5
LLPS-Phv-a014
PHAVU_001G187600g
V7D014
PHAVU_001G187600g
6
LLPS-Phv-0823
PHAVU_001G223800g
V7D271
PHAVU_001G223800g
7
LLPS-Phv-1459
PHAVU_001G234300g
V7CZ78
PHAVU_001G234300g
8
LLPS-Phv-1394
PHAVU_002G104500g
V7CLS7
PHAVU_002G104500g
9
LLPS-Phv-a025
PHAVU_002G257400g
V7CRY8
PHAVU_002G257400g
10
LLPS-Phv-a021
PHAVU_002G281900g
V7CRR1
PHAVU_002G281900g
11
LLPS-Phv-0891
PHAVU_003G186300g
T2DNZ8
PHAVU_003G186300g
12
LLPS-Phv-a011
PHAVU_003G225000g
V7CFQ0
PHAVU_003G225000g
13
LLPS-Phv-a003
PHAVU_003G243800g
V7CEX1
PHAVU_003G243800g
14
LLPS-Phv-a009
PHAVU_004G020500g
V7C1F0
PHAVU_004G020500g
15
LLPS-Phv-a001
PHAVU_004G059500g
V7C075
PHAVU_004G059500g
16
LLPS-Phv-1315
PHAVU_004G064800g
V7C0J7
PHAVU_004G064800g
17
LLPS-Phv-a006
PHAVU_004G092600g
V7C1D6
PHAVU_004G092600g
18
LLPS-Phv-a018
PHAVU_005G054600g
V7BXF4
PHAVU_005G054600g
19
LLPS-Phv-a027
PHAVU_005G184300g
V7BY25
PHAVU_005G184300g
20
LLPS-Phv-a004
PHAVU_006G082300g
V7BPG0
PHAVU_006G082300g
21
LLPS-Phv-a017
PHAVU_006G099300g
V7BRF7
PHAVU_006G099300g
22
LLPS-Phv-0163
PHAVU_006G115700g
V7BMX2
PHAVU_006G115700g
23
LLPS-Phv-a008
PHAVU_006G144800g
V7BRN3
PHAVU_006G144800g
24
LLPS-Phv-a010
PHAVU_006G165600g
V7BPK8
PHAVU_006G165600g
25
LLPS-Phv-a022
PHAVU_007G0368000g
V7BBQ0
PHAVU_007G0368000g
26
LLPS-Phv-a007
PHAVU_007G090300g
V7BDN1
PHAVU_007G090300g
27
LLPS-Phv-a016
PHAVU_007G186000g
V7BJQ1
PHAVU_007G186000g
28
LLPS-Phv-a026
PHAVU_007G265400g
V7BII3
PHAVU_007G265400g
29
LLPS-Phv-a013
PHAVU_007G278700g
V7BLK8
PHAVU_007G278700g
30
LLPS-Phv-0290
PHAVU_008G011000g
V7B080
PHAVU_008G011000g
31
LLPS-Phv-2022
PHAVU_008G054400g
V7B1F1
PHAVU_008G054400g
32
LLPS-Phv-a020
PHAVU_008G160800g
V7B533
PHAVU_008G160800g
33
LLPS-Phv-a019
PHAVU_008G267100g
V5N902
PHAVU_008G267100g
34
LLPS-Phv-2271
PHAVU_008G289700g
T2DQ60
PHAVU_008G289700g
35
LLPS-Phv-a029
PHAVU_009G110200g
V7AYC2
PHAVU_009G110200g
36
LLPS-Phv-0847
PHAVU_009G186500g
T2DNB0
PHAVU_009G186500g
37
LLPS-Phv-a000
PHAVU_009G254900g
V7B3E5
PHAVU_009G254900g
38
LLPS-Phv-2347
PHAVU_009G260200g
V7AZF5
PHAVU_009G260200g
39
LLPS-Phv-0808
PHAVU_010G011300g
V7AP65
PHAVU_010G011300g
40
LLPS-Phv-a028
PHAVU_010G119300g
V7ANS2
PHAVU_010G119300g
41
LLPS-Phv-a012
PHAVU_011G071800g
V7AF75
PHAVU_011G071800g
42
LLPS-Phv-a024
PHAVU_011G185400g
V7AKV5
PHAVU_011G185400g
43
LLPS-Phv-a002
PHAVU_002G269400g
Q84U30
PSI-N
44
LLPS-Phv-a005
PHAVU_002G303600g
A4PIS8
PvISA1
45
LLPS-Phv-a015
PHAVU_009G011000g
Q9XIS4
pvsbe1