Amborella trichopoda      Pyrenoid matrix


※ Pyrenoid matrix introduction

    Pyrenoids are non-membrane-bound, proteinaceous structures that contain a matrix packed with the CO2-fixing enzyme Rubisco. In many species, the matrix is traversed by membrane tubules that are continuous with the photosynthetic thylakoid membranes (1). Pyrenoids are a central feature of the algal CO2 concentrating mechanism, which supplies Rubisco with a high concentration of its substrate CO2, enabling more efficient carbon capture than that of most land plants. Pyrenoids are found within the chloroplasts of a diverse array of photosynthetic eukaryotes, including nearly all freshwater and marine algae, as well as a group of non-vascular plants (2).

Reference
1. Freeman R. E., Xu B., et al. (2017) The Eukaryotic CO2-Concentrating Organelle Is Liquid-like and Exhibits Dynamic Reorganization. Cell, 171(1), 148-162.e19. PMID: 28938114
2. Wang Y., et al. (2015) The CO2 concentrating mechanism and photosynthetic carbon assimilation in limiting CO2 : how Chlamydomonas works against the gradient. Plant J., 82(3), 429-48. PMID: 25765072


There are 38 genes.  Reviewed (0 or Unreviewed (38

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Amt-a013
AMTR_s00001p00048980
W1NL06
AMTR_s00001p00048980
2
LLPS-Amt-0741
AMTR_s00001p00152770
W1NM08
AMTR_s00001p00152770
3
LLPS-Amt-a009
AMTR_s00002p00183350
W1NZI3
AMTR_s00002p00183350
4
LLPS-Amt-0962
AMTR_s00003p00032960
W1P5Y2
AMTR_s00003p00032960
5
LLPS-Amt-1849
AMTR_s00003p00211760
W1P8G6
AMTR_s00003p00211760
6
LLPS-Amt-a020
AMTR_s00004p00154100
W1NEU3
AMTR_s00004p00154100
7
LLPS-Amt-0236
AMTR_s00010p00264770
W1NH48
AMTR_s00010p00264770
8
LLPS-Amt-1744
AMTR_s00012p00255830
W1PJU2
AMTR_s00012p00255830
9
LLPS-Amt-a016
AMTR_s00018p00243310
W1PKJ1
AMTR_s00018p00243310
10
LLPS-Amt-0762
AMTR_s00025p00115820
W1PX35
AMTR_s00025p00115820
11
LLPS-Amt-a003
AMTR_s00025p00193210
W1PR59
AMTR_s00025p00193210
12
LLPS-Amt-1140
AMTR_s00030p00045700
U5D6L2
AMTR_s00030p00045700
13
LLPS-Amt-1673
AMTR_s00032p00144550
U5CXH4
AMTR_s00032p00144550
14
LLPS-Amt-a019
AMTR_s00038p00234220
U5CX51
AMTR_s00038p00234220
15
LLPS-Amt-a012
AMTR_s00040p00188540
W1PYS1
AMTR_s00040p00188540
16
LLPS-Amt-a010
AMTR_s00040p00217260
W1Q003
AMTR_s00040p00217260
17
LLPS-Amt-2283
AMTR_s00040p00222120
W1PY67
AMTR_s00040p00222120
18
LLPS-Amt-a004
AMTR_s00045p00070890
W1P4U4
AMTR_s00045p00070890
19
LLPS-Amt-a021
AMTR_s00053p00188250
W1PDK2
AMTR_s00053p00188250
20
LLPS-Amt-1788
AMTR_s00054p00039660
U5D6Q1
AMTR_s00054p00039660
21
LLPS-Amt-a023
AMTR_s00056p00076060
U5CYS9
AMTR_s00056p00076060
22
LLPS-Amt-a018
AMTR_s00059p00121300
U5D5R4
AMTR_s00059p00121300
23
LLPS-Amt-1561
AMTR_s00061p00059490
U5DA13
AMTR_s00061p00059490
24
LLPS-Amt-a011
AMTR_s00067p00174670
U5DES0
AMTR_s00067p00174670
25
LLPS-Amt-a014
AMTR_s00068p00029180
U5DFX2
AMTR_s00068p00029180
26
LLPS-Amt-a006
AMTR_s00074p00121610
W1NPK5
AMTR_s00074p00121610
27
LLPS-Amt-a001
AMTR_s00076p00039590
W1P431
AMTR_s00076p00039590
28
LLPS-Amt-2276
AMTR_s00077p00185050
W1P9M2
AMTR_s00077p00185050
29
LLPS-Amt-a002
AMTR_s00079p00061090
W1P273
AMTR_s00079p00061090
30
LLPS-Amt-2105
AMTR_s00087p00141000
W1P4T2
AMTR_s00087p00141000
31
LLPS-Amt-a007
AMTR_s00090p00154050
W1P418
AMTR_s00090p00154050
32
LLPS-Amt-a008
AMTR_s00092p00171180
W1NVL1
AMTR_s00092p00171180
33
LLPS-Amt-a022
AMTR_s00100p00051890
W1NYN3
AMTR_s00100p00051890
34
LLPS-Amt-a017
AMTR_s00105p00057070
W1NZ97
AMTR_s00105p00057070
35
LLPS-Amt-a015
AMTR_s00131p00114510
W1NW18
AMTR_s00131p00114510
36
LLPS-Amt-a005
AMTR_s00180p00054930
W1PZ58
AMTR_s00180p00054930
37
LLPS-Amt-a000
AMTR_s00209p00025500
W1P2I5
AMTR_s00209p00025500
38
LLPS-Amt-2312
AMTR_s00010p00259410
W1NG32
PFK