Sus scrofa      PcG body


※ PcG body introduction

    PcG bodies, termed polycomb bodies, are subnuclear organelles containing polycomb group proteins. They are a kind of PMLOs located in nucleus, which possess liquid-like behavior and are believed to be formed as a result of biological liquid-liquid phase transitions, where an intricate interplay between RNA and intrinsically disordered proteins (IDPs) or hybrid proteins containing ordered domains and intrinsically disordered protein regions (IDPRs) may play an important role, they are formed as a result of highly regulated and reversible liquid-liquid demixing phase separation and represent condensed liquid droplets, which are invariantly enriched in intrinsically disordered proteins (1). They correspond to local accumulations of PcG proteins, which are important epigenetic regulators that control transcription of their target genes (2). Morover, Polycomb body–associated PHC2 was found to interact with the Polycomb repressive complex, which is relevant to the function of polycomb bodies in transcription regulation (3).

Reference
1. Uversky, V. N. (2017) MappingIntrinsically disordered proteins in overcrowded milieu: Membrane-less organelles, phase separation, and intrinsic disorder. Curr Opin Struct Biol, 44, 18-30. PMID: 27838525
2. Smigova, J., Juda, P., Krejci, J., & Raska, I. (2014) MappingStructural basis of polycomb bodies. Folia Biol (Praha), 60 Suppl 1, 13-20. PMID: 25369336
3. Fong, K. W., Li, Y., Wang, W., Ma, W., Li, K., Qi, R. Z., et al. (2013) MappingWhole-genome screening identifies proteins localized to distinct nuclear bodies. J Cell Biol, 203(1), 149-164. PMID: 24127217


There are 29 genes.  Reviewed (0 or Unreviewed (29

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sus-2633
ENSSSCG00000000587.3
F1SQZ3
AEBP2
2
LLPS-Sus-0984
ENSSSCG00000005935.3
A0A287B5S7
AGO2
3
LLPS-Sus-2211
ENSSSCG00000008575.3
F1SDL7
ASXL2
4
LLPS-Sus-4573
ENSSSCG00000011438.4
A0A287A7E1
BAP1
5
LLPS-Sus-0203
ENSSSCG00000011081.3
F2Z5D1
BMI1
6
LLPS-Sus-0148
ENSSSCG00000024261.2
I3LU16
CBX2
7
LLPS-Sus-0167
ENSSSCG00000017160.3
F1RZ78
CBX4
8
LLPS-Sus-2322
ENSSSCG00000040334.1
A0A286ZRM0
CBX6
9
LLPS-Sus-0638
ENSSSCG00000008026.3
F1RG01
CRAMP1
10
LLPS-Sus-1359
ENSSSCG00000024253.2
I3LDG5
CTCF
11
LLPS-Sus-0909
ENSSSCG00000014915.3
A0A287B4M4
EED
12
LLPS-Sus-4019
ENSSSCG00000028465.2
I3L9W8
ELAC2
13
LLPS-Sus-1252
ENSSSCG00000028840.2
I3L7H6
EZH2
14
LLPS-Sus-1460
ENSSSCG00000017540.3
F1RWG0
HOXB5
15
LLPS-Sus-3464
ENSSSCG00000001061.3
A0A286ZRY6
JARID2
16
LLPS-Sus-2718
ENSSSCG00000006898.4
F1S531
MTF2
17
LLPS-Sus-0665
ENSSSCG00000012403.4
K7GKQ6
OGT
18
LLPS-Sus-0330
ENSSSCG00000030642.2
I3L813
PCNA
19
LLPS-Sus-2248
ENSSSCG00000025344.2
I3LIR0
PHC2
20
LLPS-Sus-0591
ENSSSCG00000030467.2
A0A287AV02
PHC3
21
LLPS-Sus-0202
ENSSSCG00000014959.3
A0A287A3H1
PIWIL4
22
LLPS-Sus-0205
ENSSSCG00000037307.1
A0A287B580
PRC1
23
LLPS-Sus-1736
ENSSSCG00000028423.2
I3LKT8
RBBP4
24
LLPS-Sus-3780
ENSSSCG00000001477.4
A5D9P0
RING1
25
LLPS-Sus-3840
ENSSSCG00000004589.3
F1S053
RNF111
26
LLPS-Sus-3915
ENSSSCG00000015568.3
A0A286ZX77
RNF2
27
LLPS-Sus-0001
ENSSSCG00000017744.3
A0A287AWV4
SUZ12
28
LLPS-Sus-4236
ENSSSCG00000010357.2
A0A287AK09
WAPL
29
LLPS-Sus-0936
ENSSSCG00000037558.1
K9IVK7
YY1