Ictalurus punctatus      PcG body


※ PcG body introduction

    PcG bodies, termed polycomb bodies, are subnuclear organelles containing polycomb group proteins. They are a kind of PMLOs located in nucleus, which possess liquid-like behavior and are believed to be formed as a result of biological liquid-liquid phase transitions, where an intricate interplay between RNA and intrinsically disordered proteins (IDPs) or hybrid proteins containing ordered domains and intrinsically disordered protein regions (IDPRs) may play an important role, they are formed as a result of highly regulated and reversible liquid-liquid demixing phase separation and represent condensed liquid droplets, which are invariantly enriched in intrinsically disordered proteins (1). They correspond to local accumulations of PcG proteins, which are important epigenetic regulators that control transcription of their target genes (2). Morover, Polycomb body–associated PHC2 was found to interact with the Polycomb repressive complex, which is relevant to the function of polycomb bodies in transcription regulation (3).

Reference
1. Uversky, V. N. (2017) MappingIntrinsically disordered proteins in overcrowded milieu: Membrane-less organelles, phase separation, and intrinsic disorder. Curr Opin Struct Biol, 44, 18-30. PMID: 27838525
2. Smigova, J., Juda, P., Krejci, J., & Raska, I. (2014) MappingStructural basis of polycomb bodies. Folia Biol (Praha), 60 Suppl 1, 13-20. PMID: 25369336
3. Fong, K. W., Li, Y., Wang, W., Ma, W., Li, K., Qi, R. Z., et al. (2013) MappingWhole-genome screening identifies proteins localized to distinct nuclear bodies. J Cell Biol, 203(1), 149-164. PMID: 24127217


There are 26 genes.  Reviewed (0 or Unreviewed (26

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Icp-2780
ENSIPUG00000014270.1
W5U5N9
aebp2
2
LLPS-Icp-1320
ENSIPUG00000001018.1
A0A2D0PVU4
ago2
3
LLPS-Icp-4245
ENSIPUG00000023610.1
A0A2D0RNV0
asxl2
4
LLPS-Icp-2787
ENSIPUG00000019690.1
A0A2D0PKF4
bap1
5
LLPS-Icp-1510
ENSIPUG00000006628.1
A0A2D0PVE8
bmi1
6
LLPS-Icp-3881
ENSIPUG00000022013.1
W5UDU3
CBX2
7
LLPS-Icp-1375
ENSIPUG00000005679.1
W5U6B4
Cbx4
8
LLPS-Icp-0179
ENSIPUG00000023314.1
A0A2D0T4E2
cramp1
9
LLPS-Icp-2536
ENSIPUG00000003840.1
A0A2D0QSV0
ctcf
10
LLPS-Icp-1497
ENSIPUG00000013630.1
A0A2D0Q5X0
eed
11
LLPS-Icp-0917
ENSIPUG00000022303.1
A0A2D0S3P8
elac2
12
LLPS-Icp-0400
ENSIPUG00000006483.1
A0A2D0PUR1
ezh2
13
LLPS-Icp-2647
ENSIPUG00000019508.1
W5U8Y1
hoxb5b
14
LLPS-Icp-1044
ENSIPUG00000017520.1
A0A2D0S264
jarid2
15
LLPS-Icp-2294
ENSIPUG00000020149.1
A0A2D0Q100
LOC108258103
16
LLPS-Icp-0668
ENSIPUG00000010166.1
A0A2D0Q6V4
LOC108259424
17
LLPS-Icp-0032
ENSIPUG00000023603.1
A0A2D0RZF9
LOC108272160
18
LLPS-Icp-3660
ENSIPUG00000013556.1
W5UE34
MTF2
19
LLPS-Icp-0014
ENSIPUG00000024603.1
W5UE27
pcna
20
LLPS-Icp-0775
ENSIPUG00000020698.1
A0A2D0SJG2
phc2
21
LLPS-Icp-3028
ENSIPUG00000022676.1
W5UJ05
PRC1
22
LLPS-Icp-0478
ENSIPUG00000021702.1
W5ULS4
rbbp4
23
LLPS-Icp-1627
ENSIPUG00000023212.1
W5U759
RNF111
24
LLPS-Icp-2646
ENSIPUG00000001108.1
W5UA49
rnf2
25
LLPS-Icp-3885
ENSIPUG00000001342.1
W5ULB5
suz12a
26
LLPS-Icp-1016
ENSIPUG00000022190.1
W5USL2
WAPAL