Rhinopithecus bieti      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 116 genes.  Reviewed (0 or Unreviewed (116

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Rhb-0008
ENSRBIG00000018859.1
A0A2K6JYE2
2
LLPS-Rhb-0484
ENSRBIG00000028925.1
A0A2K6KFY6
3
LLPS-Rhb-0643
ENSRBIG00000036670.1
A0A2K6LPY7
4
LLPS-Rhb-1173
ENSRBIG00000029745.1
A0A2K6KK85
5
LLPS-Rhb-1378
ENSRBIG00000035588.1
A0A2K6LIQ3
6
LLPS-Rhb-2099
ENSRBIG00000034445.1
A0A2K6LBN3
7
LLPS-Rhb-2459
ENSRBIG00000033251.1
A0A2K6L4V4
8
LLPS-Rhb-2713
ENSRBIG00000038965.1
A0A2K6M325
9
LLPS-Rhb-3062
ENSRBIG00000044269.1
A0A2K6N1K5
10
LLPS-Rhb-3295
ENSRBIG00000034341.1
A0A2K6LB31
11
LLPS-Rhb-3524
ENSRBIG00000006980.1
A0A2K6JQQ3
12
LLPS-Rhb-4003
ENSRBIG00000039547.1
A0A2K6M6N6
13
LLPS-Rhb-4161
ENSRBIG00000015923.1
A0A2K6JWL6
14
LLPS-Rhb-4236
ENSRBIG00000019503.1
A0A2K6JYR9
15
LLPS-Rhb-1657
ENSRBIG00000028225.1
A0A2K6KDC0
AGO2
16
LLPS-Rhb-3706
ENSRBIG00000028610.1
A0A2K6KDS9
AKAP17A
17
LLPS-Rhb-2185
ENSRBIG00000039651.1
A0A2K6M7B4
ALYREF
18
LLPS-Rhb-4160
ENSRBIG00000033701.1
A0A2K6L782
ANXA10
19
LLPS-Rhb-0375
ENSRBIG00000041394.1
A0A2K6MII7
ANXA2
20
LLPS-Rhb-2959
ENSRBIG00000035918.1
A0A2K6LKF2
ARL6IP4
21
LLPS-Rhb-2603
ENSRBIG00000036310.1
A0A2K6LMU4
BCAS2
22
LLPS-Rhb-3187
ENSRBIG00000030208.1
A0A2K6KMN2
C9orf78
23
LLPS-Rhb-3228
ENSRBIG00000029213.1
A0A2K6KHJ9
CARM1
24
LLPS-Rhb-0936
ENSRBIG00000033289.1
A0A2K6L526
CASC3
25
LLPS-Rhb-2280
ENSRBIG00000040084.1
A0A2K6MA29
CCNL1
26
LLPS-Rhb-1076
ENSRBIG00000037455.1
A0A2K6LUH2
CDC5L
27
LLPS-Rhb-2519
ENSRBIG00000044302.1
A0A2K6N1S1
CDK1
28
LLPS-Rhb-2905
ENSRBIG00000029386.1
A0A2K6KIJ6
CDK7
29
LLPS-Rhb-2781
ENSRBIG00000039104.1
A0A2K6M3Z3
CDK9
30
LLPS-Rhb-1981
ENSRBIG00000044243.1
A0A2K6N1L5
COP1
31
LLPS-Rhb-3413
ENSRBIG00000032845.1
A0A2K6L2S9
CSNK1A1
32
LLPS-Rhb-3577
ENSRBIG00000031309.1
A0A2K6KT02
DDX39B
33
LLPS-Rhb-1137
ENSRBIG00000041150.1
A0A2K6MGP5
DDX46
34
LLPS-Rhb-2190
ENSRBIG00000015201.1
A0A2K6JW28
DGCR8
35
LLPS-Rhb-0072
ENSRBIG00000034353.1
A0A2K6LB60
DNAJB1
36
LLPS-Rhb-1847
ENSRBIG00000034194.1
A0A2K6LA61
DNAJC17
37
LLPS-Rhb-4543
ENSRBIG00000030013.1
A0A2K6KLL5
DYRK3
38
LLPS-Rhb-0016
ENSRBIG00000032230.1
A0A2K6KYP9
EGF
39
LLPS-Rhb-1254
ENSRBIG00000034342.1
A0A2K6LB26
ERH
40
LLPS-Rhb-2261
ENSRBIG00000044059.1
A0A2K6N0B2
EZH1
41
LLPS-Rhb-0676
ENSRBIG00000006024.1
A0A2K6JQ82
FAM76B
42
LLPS-Rhb-4508
ENSRBIG00000027983.1
A0A2K6KAB6
FAM83H
43
LLPS-Rhb-1577
ENSRBIG00000024960.1
A0A2K6K3G0
FANCD2
44
LLPS-Rhb-2098
ENSRBIG00000001906.1
A0A2K6JNV3
FANCI
45
LLPS-Rhb-4287
ENSRBIG00000028880.1
A0A2K6KFK0
FBXL18
46
LLPS-Rhb-1423
ENSRBIG00000032645.1
A0A2K6L209
FGFR1
47
LLPS-Rhb-2473
ENSRBIG00000039260.1
A0A2K6M4Y2
FRMD8
48
LLPS-Rhb-1468
ENSRBIG00000042196.1
A0A2K6MN44
FUS
49
LLPS-Rhb-0113
ENSRBIG00000037773.1
A0A2K6LW90
GLI3
50
LLPS-Rhb-0092
ENSRBIG00000036074.1
A0A2K6LLG4
GSK3B
51
LLPS-Rhb-1504
ENSRBIG00000042987.1
A0A2K6MTG0
HIF1A
52
LLPS-Rhb-2589
ENSRBIG00000037340.1
A0A2K6LTS3
HIF3A
53
LLPS-Rhb-1554
ENSRBIG00000040216.1
A0A2K6MAQ9
HIPK2
54
LLPS-Rhb-2163
ENSRBIG00000029387.1
A0A2K6KIP1
HNRNPA1
55
LLPS-Rhb-4295
ENSRBIG00000044578.1
A0A2K6N3U0
HNRNPK
56
LLPS-Rhb-4635
ENSRBIG00000036010.1
A0A2K6LL05
HSPA6
57
LLPS-Rhb-3813
ENSRBIG00000034746.1
A0A2K6LDI2
HSPH1
58
LLPS-Rhb-0769
ENSRBIG00000042614.1
A0A2K6MQY5
ILF2
59
LLPS-Rhb-3498
ENSRBIG00000038846.1
A0A2K6M2G4
ILF3
60
LLPS-Rhb-0983
ENSRBIG00000017544.1
A0A2K6JXK0
IVNS1ABP
61
LLPS-Rhb-0308
ENSRBIG00000033552.1
A0A2K6L6M9
LUC7L
62
LLPS-Rhb-0044
ENSRBIG00000041176.1
A0A2K6MGV9
MAGOH
63
LLPS-Rhb-3576
ENSRBIG00000043632.1
A0A2K6MXC9
NAGK
64
LLPS-Rhb-2093
ENSRBIG00000039091.1
A0A2K6M3W8
NKAP
65
LLPS-Rhb-1136
ENSRBIG00000037966.1
A0A2K6LXA4
NONO
66
LLPS-Rhb-2415
ENSRBIG00000034857.1
A0A2K6LE90
NR5A1
67
LLPS-Rhb-1233
ENSRBIG00000044358.1
A0A2K6N239
NSRP1
68
LLPS-Rhb-0917
ENSRBIG00000012566.1
A0A2K6JU83
NUAK2
69
LLPS-Rhb-1839
ENSRBIG00000026842.1
A0A2K6K624
OGG1
70
LLPS-Rhb-1345
ENSRBIG00000032293.1
A0A2K6KZ31
P2RY12
71
LLPS-Rhb-2043
ENSRBIG00000041191.1
A0A2K6MH38
PLRG1
72
LLPS-Rhb-3419
ENSRBIG00000029486.1
A0A2K6KIX7
PNN
73
LLPS-Rhb-4719
ENSRBIG00000028208.1
A0A2K6KCA8
PPIG
74
LLPS-Rhb-1200
ENSRBIG00000036672.1
A0A2K6LQA5
PRPF19
75
LLPS-Rhb-1971
ENSRBIG00000031219.1
A0A2K6KUB0
PRPF8
76
LLPS-Rhb-3574
ENSRBIG00000036686.1
A0A2K6LQ15
PSMA3
77
LLPS-Rhb-0686
ENSRBIG00000036057.1
A0A2K6LLB9
PSPC1
78
LLPS-Rhb-2023
ENSRBIG00000044228.1
A0A2K6N1D0
PTBP1
79
LLPS-Rhb-1464
ENSRBIG00000035534.1
A0A2K6LI91
RAPGEF1
80
LLPS-Rhb-1937
ENSRBIG00000043727.1
A0A2K6MXY3
RBM17
81
LLPS-Rhb-3807
ENSRBIG00000039276.1
A0A2K6M518
RBM23
82
LLPS-Rhb-2535
ENSRBIG00000043718.1
A0A2K6MXV9
RBMX2
83
LLPS-Rhb-3587
ENSRBIG00000030571.1
A0A2K6KPD4
RNF151
84
LLPS-Rhb-1520
ENSRBIG00000042818.1
A0A2K6MSN1
SF1
85
LLPS-Rhb-1266
ENSRBIG00000032167.1
A0A2K6KY67
SF3A1
86
LLPS-Rhb-3320
ENSRBIG00000026709.1
A0A2K6K5I8
SF3A2
87
LLPS-Rhb-0536
ENSRBIG00000043567.1
A0A2K6MWZ2
SF3A3
88
LLPS-Rhb-0388
ENSRBIG00000026096.1
A0A2K6K4Z4
SF3B1
89
LLPS-Rhb-0706
ENSRBIG00000035286.1
A0A2K6LGK9
SFPQ
90
LLPS-Rhb-0987
ENSRBIG00000026650.1
A0A2K6K5G1
SMAD3
91
LLPS-Rhb-4723
ENSRBIG00000043111.1
A0A2K6MU69
SNRNP35
92
LLPS-Rhb-1742
ENSRBIG00000042387.1
A0A2K6MPI5
SNRNP70
93
LLPS-Rhb-0139
ENSRBIG00000008335.1
A0A2K6JRS6
SNRPA
94
LLPS-Rhb-2181
ENSRBIG00000035602.1
A0A2K6LIN6
SNRPA1
95
LLPS-Rhb-0682
ENSRBIG00000030319.1
A0A2K6KN48
SNRPB2
96
LLPS-Rhb-2797
ENSRBIG00000035729.1
A0A2K6LJB7
SPOP
97
LLPS-Rhb-2224
ENSRBIG00000033934.1
A0A2K6L8S2
SRRM2
98
LLPS-Rhb-1164
ENSRBIG00000028456.1
A0A2K6KDA5
SRSF10
99
LLPS-Rhb-2371
ENSRBIG00000042971.1
A0A2K6MTC2
SRSF11
100
LLPS-Rhb-0350
ENSRBIG00000034493.1
A0A2K6LBX7
SRSF2
101
LLPS-Rhb-1117
ENSRBIG00000036836.1
A0A2K6LR14
SRSF3
102
LLPS-Rhb-1593
ENSRBIG00000035789.1
A0A2K6LJM8
SRSF4
103
LLPS-Rhb-1430
ENSRBIG00000024695.1
A0A2K6K2X2
SRSF7
104
LLPS-Rhb-1250
ENSRBIG00000042683.1
A0A2K6MRG3
SRSF9
105
LLPS-Rhb-0210
ENSRBIG00000028053.1
A0A2K6KAM9
STAT3
106
LLPS-Rhb-4246
ENSRBIG00000038729.1
A0A2K6M1P8
TAP1
107
LLPS-Rhb-1640
ENSRBIG00000040774.1
A0A2K6MEG2
TGFBR1
108
LLPS-Rhb-2275
ENSRBIG00000042036.1
A0A2K6MM61
TRA2B
109
LLPS-Rhb-3596
ENSRBIG00000039635.1
A0A2K6M790
TTC14
110
LLPS-Rhb-0086
ENSRBIG00000041018.1
A0A2K6MFY3
U2AF2
111
LLPS-Rhb-2658
ENSRBIG00000041099.1
A0A2K6MGY2
U2SURP
112
LLPS-Rhb-0059
ENSRBIG00000029189.1
A0A2K6KHI6
XPO1
113
LLPS-Rhb-2397
ENSRBIG00000028279.1
A0A2K6KCS5
YTHDC1
114
LLPS-Rhb-1964
ENSRBIG00000038286.1
A0A2K6LZ98
ZC3H11A
115
LLPS-Rhb-2154
ENSRBIG00000035182.1
A0A2K6LG19
ZNF106
116
LLPS-Rhb-4637
ENSRBIG00000033767.1
A0A2K6L7Q5
ZNF131