Papio anubis      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 117 genes.  Reviewed (0 or Unreviewed (117

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Paa-0365
ENSPANG00000013149.2
A0A2I3M8L3
2
LLPS-Paa-0379
ENSPANG00000006608.2
A0A096MSB6
3
LLPS-Paa-0464
ENSPANG00000022031.2
A0A096P561
4
LLPS-Paa-0497
ENSPANG00000010434.2
A0A096MSQ8
5
LLPS-Paa-0829
ENSPANG00000018768.2
A0A096NHS7
6
LLPS-Paa-1099
ENSPANG00000003696.2
A0A096N078
7
LLPS-Paa-1169
ENSPANG00000035017.1
A0A2I3LZM6
8
LLPS-Paa-1197
ENSPANG00000022305.2
A0A096P4S7
9
LLPS-Paa-1249
ENSPANG00000020523.2
A0A096NTZ6
10
LLPS-Paa-1400
ENSPANG00000020754.2
A0A2I3NBB3
11
LLPS-Paa-1424
ENSPANG00000035148.1
A0A2I3LFA6
12
LLPS-Paa-1443
ENSPANG00000017200.2
A0A096NM87
13
LLPS-Paa-2077
ENSPANG00000024992.2
A0A2I3LKY1
14
LLPS-Paa-2701
ENSPANG00000025055.2
A0A096NXG8
15
LLPS-Paa-3274
ENSPANG00000031030.1
A0A2I3MZR0
16
LLPS-Paa-3337
ENSPANG00000031360.1
A0A2I3MVU4
17
LLPS-Paa-3509
ENSPANG00000024077.3
A0A096NJC4
18
LLPS-Paa-4098
ENSPANG00000007163.2
A0A096NVD3
19
LLPS-Paa-4706
ENSPANG00000023326.2
A0A2I3LGY4
20
LLPS-Paa-1348
ENSPANG00000005604.2
A0A2I3NHU3
AGO2
21
LLPS-Paa-4835
ENSPANG00000025821.2
A0A096P0Q0
AKAP17A
22
LLPS-Paa-2069
ENSPANG00000019265.2
A0A2I3MT45
ALYREF
23
LLPS-Paa-2373
ENSPANG00000009896.2
A0A096N5Q0
ANXA10
24
LLPS-Paa-1932
ENSPANG00000005574.2
A0A096NG15
ATR
25
LLPS-Paa-0697
ENSPANG00000019089.2
A0A096MKK2
BCAS2
26
LLPS-Paa-4825
ENSPANG00000025976.2
A0A096P0G8
C9orf78
27
LLPS-Paa-3791
ENSPANG00000021071.2
A0A0A0MVR1
CARM1
28
LLPS-Paa-3326
ENSPANG00000021708.2
A0A2I3M407
CASC3
29
LLPS-Paa-2269
ENSPANG00000015798.3
A0A2I3NH80
CCNL1
30
LLPS-Paa-0133
ENSPANG00000018654.2
A0A096NIN4
CDC5L
31
LLPS-Paa-2438
ENSPANG00000032872.1
A0A2I3M1G3
CDK7
32
LLPS-Paa-0602
ENSPANG00000024835.2
A0A096P1Z7
CDK9
33
LLPS-Paa-2947
ENSPANG00000004460.2
A0A2I3N4V0
CDKL5
34
LLPS-Paa-2556
ENSPANG00000015165.2
A0A2I3LL60
COP1
35
LLPS-Paa-4484
ENSPANG00000010406.2
A0A2I3NG04
CSNK1A1
36
LLPS-Paa-0582
ENSPANG00000018609.2
A0A096MWV8
DDX39B
37
LLPS-Paa-3186
ENSPANG00000025084.2
A0A096ND59
DDX46
38
LLPS-Paa-2160
ENSPANG00000019987.2
A0A096NQA0
DGCR8
39
LLPS-Paa-0346
ENSPANG00000015164.2
A0A0A0MW19
DNAJB1
40
LLPS-Paa-1648
ENSPANG00000019322.2
A0A096NTI7
DNAJC17
41
LLPS-Paa-0758
ENSPANG00000004522.2
A0A096N2U1
DYRK3
42
LLPS-Paa-4102
ENSPANG00000006015.3
A0A096N8N3
EGF
43
LLPS-Paa-3769
ENSPANG00000021428.2
A0A096P5U8
EZH1
44
LLPS-Paa-1758
ENSPANG00000006473.2
A0A096MYA0
FAM76B
45
LLPS-Paa-4597
ENSPANG00000007686.2
A0A096NP98
FAM83H
46
LLPS-Paa-2841
ENSPANG00000014260.3
A0A096NN69
FANCI
47
LLPS-Paa-1870
ENSPANG00000018934.2
A0A2I3N0Z4
FBXL18
48
LLPS-Paa-2376
ENSPANG00000012485.2
A0A096MT31
FGFR1
49
LLPS-Paa-3689
ENSPANG00000013649.2
A0A096N7L5
FRMD8
50
LLPS-Paa-1176
ENSPANG00000021275.2
A0A096NHY1
FUS
51
LLPS-Paa-2044
ENSPANG00000030359.1
A0A2I3LUJ3
FYTTD1
52
LLPS-Paa-0499
ENSPANG00000014545.2
A0A096NQT8
GLI3
53
LLPS-Paa-0261
ENSPANG00000006079.2
A0A2I3LTA9
GSK3B
54
LLPS-Paa-2416
ENSPANG00000003899.3
A0A2I3LTW0
HIF1A
55
LLPS-Paa-3894
ENSPANG00000014598.2
A0A2I3M253
HIF3A
56
LLPS-Paa-2129
ENSPANG00000017281.2
A0A096NQT0
HIPK2
57
LLPS-Paa-0269
ENSPANG00000021598.2
A0A2I3LGK2
HNRNPA2B1
58
LLPS-Paa-2687
ENSPANG00000024881.2
A0A2I3LSM4
HNRNPK
59
LLPS-Paa-4537
ENSPANG00000012232.3
A0A096NWX5
HSPH1
60
LLPS-Paa-0975
ENSPANG00000008736.2
A0A096NE77
ILF2
61
LLPS-Paa-1596
ENSPANG00000014995.2
A0A2I3MBY8
ILF3
62
LLPS-Paa-0433
ENSPANG00000016770.2
A0A096N133
IVNS1ABP
63
LLPS-Paa-3863
ENSPANG00000020037.3
A9L8U1
LUC7L
64
LLPS-Paa-2464
ENSPANG00000035635.1
A0A2I3MAT7
MAGOH
65
LLPS-Paa-4605
ENSPANG00000006889.2
A0A096N0X7
NAGK
66
LLPS-Paa-1776
ENSPANG00000013752.2
A0A096NP52
NKAP
67
LLPS-Paa-1104
ENSPANG00000010475.2
A0A0A0MVU3
NOSIP
68
LLPS-Paa-3877
ENSPANG00000025862.2
A0A2I3LG00
NR5A1
69
LLPS-Paa-2584
ENSPANG00000023146.2
A0A096P3L3
NSRP1
70
LLPS-Paa-3168
ENSPANG00000018147.2
A0A096MUS5
NUAK2
71
LLPS-Paa-3530
ENSPANG00000012132.2
A0A096NET5
NXF1
72
LLPS-Paa-4147
ENSPANG00000018759.2
A0A2I3LTP7
OGG1
73
LLPS-Paa-4497
ENSPANG00000019391.2
A0A096MLT4
P2RY12
74
LLPS-Paa-3627
ENSPANG00000011314.2
A0A096N6Z6
PCBP1
75
LLPS-Paa-0655
ENSPANG00000015577.2
A0A096MYC6
PLRG1
76
LLPS-Paa-2051
ENSPANG00000036062.1
A0A2I3MLK1
PNN
77
LLPS-Paa-2312
ENSPANG00000020996.2
A0A096NZD7
PPIG
78
LLPS-Paa-0224
ENSPANG00000002762.2
A0A2I3LU32
PRPF19
79
LLPS-Paa-1466
ENSPANG00000024607.2
A0A096P2A4
PRPF8
80
LLPS-Paa-0150
ENSPANG00000007281.2
A0A0A0MVE9
PTBP1
81
LLPS-Paa-4860
ENSPANG00000025994.2
A0A2I3ML07
RAPGEF1
82
LLPS-Paa-1426
ENSPANG00000023425.2
A0A096P3C9
RBM17
83
LLPS-Paa-0437
ENSPANG00000001324.2
A0A2I3MTC0
RBM23
84
LLPS-Paa-3926
ENSPANG00000019234.2
A0A096NKZ0
RNF151
85
LLPS-Paa-2622
ENSPANG00000015748.2
A0A096NL34
RNPS1
86
LLPS-Paa-0097
ENSPANG00000020772.3
A0A096NJG8
SF3A1
87
LLPS-Paa-0626
ENSPANG00000007949.3
A0A0A0MWS7
SF3A2
88
LLPS-Paa-2133
ENSPANG00000021859.2
A0A2I3MXZ7
SF3A3
89
LLPS-Paa-3715
ENSPANG00000013417.2
A0A096N1H4
SF3B1
90
LLPS-Paa-0988
ENSPANG00000016627.2
A0A096NMF6
SMAD3
91
LLPS-Paa-1294
ENSPANG00000006017.2
A0A096NDJ1
SNRNP200
92
LLPS-Paa-1347
ENSPANG00000019739.2
A0A096NPV2
SNRNP35
93
LLPS-Paa-3795
ENSPANG00000004068.3
A0A0A0MXK3
SNRNP70
94
LLPS-Paa-1040
ENSPANG00000023874.2
A0A0A0MVA0
SNRPA
95
LLPS-Paa-1048
ENSPANG00000020921.2
A0A096NNG4
SNRPA1
96
LLPS-Paa-1783
ENSPANG00000004881.3
A0A096NVL7
SNRPB2
97
LLPS-Paa-4383
ENSPANG00000022821.2
A0A096P456
SPOP
98
LLPS-Paa-0797
ENSPANG00000016966.2
A0A096NL82
SRRM2
99
LLPS-Paa-2471
ENSPANG00000021680.2
A0A096MMA4
SRSF10
100
LLPS-Paa-0591
ENSPANG00000018677.2
A0A096N8C2
SRSF11
101
LLPS-Paa-2912
ENSPANG00000020023.2
A0A096NT49
SRSF2
102
LLPS-Paa-1044
ENSPANG00000021937.2
A0A096NGB1
SRSF4
103
LLPS-Paa-2070
ENSPANG00000018079.2
A0A096NRM9
SRSF7
104
LLPS-Paa-1653
ENSPANG00000016072.2
A0A096MXZ5
SRSF9
105
LLPS-Paa-2240
ENSPANG00000021451.2
A0A2I3MP47
STAT3
106
LLPS-Paa-3387
ENSPANG00000024178.2
A0A096NHE3
TAP1
107
LLPS-Paa-0419
ENSPANG00000025670.2
A0A2I3NGA1
TGFBR1
108
LLPS-Paa-1007
ENSPANG00000000838.2
A0A096N3T3
TRA2B
109
LLPS-Paa-1325
ENSPANG00000011012.2
A0A096N386
TTC14
110
LLPS-Paa-0142
ENSPANG00000008459.2
A0A0A0MWY7
U2AF2
111
LLPS-Paa-1606
ENSPANG00000000710.3
A0A096MSL5
U2SURP
112
LLPS-Paa-1203
ENSPANG00000006892.2
A0A096MSI6
XPO1
113
LLPS-Paa-2271
ENSPANG00000021590.3
A0A096MLF1
YTHDC1
114
LLPS-Paa-2559
ENSPANG00000011479.2
A0A096N8P0
ZC3H11A
115
LLPS-Paa-1868
ENSPANG00000018631.2
A0A096P0C4
ZNF106
116
LLPS-Paa-1316
ENSPANG00000011134.2
A0A096MMF5
ZNF131
117
LLPS-Paa-0399
ENSPANG00000021149.2
A0A096NHT9
ZNF688