Nomascus leucogenys      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 112 genes.  Reviewed (0 or Unreviewed (112

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Nol-1391
ENSNLEG00000003257.3
A0A2I3GA93
2
LLPS-Nol-2097
ENSNLEG00000033384.1
A0A2I3HRB7
3
LLPS-Nol-0239
ENSNLEG00000001461.3
G1QLE6
AGO2
4
LLPS-Nol-3979
ENSNLEG00000000043.2
G1QGM6
AKAP17A
5
LLPS-Nol-0353
ENSNLEG00000006535.3
G1R430
ANXA10
6
LLPS-Nol-3413
ENSNLEG00000011678.3
G1RMA9
ANXA2
7
LLPS-Nol-1431
ENSNLEG00000002378.2
A0A2I3GM89
ARL6IP4
8
LLPS-Nol-0361
ENSNLEG00000004792.3
A0A2I3FYG5
ATR
9
LLPS-Nol-4295
ENSNLEG00000004737.2
G1QXT9
BCAS2
10
LLPS-Nol-0845
ENSNLEG00000017658.3
G1S7D9
C9orf78
11
LLPS-Nol-0567
ENSNLEG00000012371.2
G1RP73
CARM1
12
LLPS-Nol-4198
ENSNLEG00000001598.3
G1QM47
CASC3
13
LLPS-Nol-1682
ENSNLEG00000003998.3
A0A2I3HHG4
CCNL1
14
LLPS-Nol-1909
ENSNLEG00000003627.2
G1QTX3
CDC5L
15
LLPS-Nol-1831
ENSNLEG00000012138.3
A0A2I3G9U5
CDK1
16
LLPS-Nol-3059
ENSNLEG00000026726.2
A0A2I3H4U2
CDK7
17
LLPS-Nol-1103
ENSNLEG00000017490.2
G1S6U6
CDK9
18
LLPS-Nol-3327
ENSNLEG00000009674.3
G1REY2
CDKL5
19
LLPS-Nol-1284
ENSNLEG00000012062.2
A0A2I3HUG4
CLK2
20
LLPS-Nol-3832
ENSNLEG00000015420.2
G1RZR4
COP1
21
LLPS-Nol-0475
ENSNLEG00000027267.1
A0A2I3HMA6
CSNK1A1
22
LLPS-Nol-0823
ENSNLEG00000006291.3
G1R371
CTNNBL1
23
LLPS-Nol-0789
ENSNLEG00000008167.3
A0A2I3H2A4
DDX46
24
LLPS-Nol-3650
ENSNLEG00000005643.3
G1R0Z4
DGCR8
25
LLPS-Nol-2474
ENSNLEG00000000742.3
M3Z9X3
DYRK3
26
LLPS-Nol-0208
ENSNLEG00000016536.2
G1S3J7
EGF
27
LLPS-Nol-1231
ENSNLEG00000011422.3
G1RKX5
ELOA2
28
LLPS-Nol-3579
ENSNLEG00000001514.2
G1QLG4
ERH
29
LLPS-Nol-1739
ENSNLEG00000002142.2
G1QNP9
FAM83H
30
LLPS-Nol-1146
ENSNLEG00000026979.2
A0A2I3GNX9
FANCD2
31
LLPS-Nol-1080
ENSNLEG00000011520.2
G1RLM9
FANCI
32
LLPS-Nol-1570
ENSNLEG00000011689.3
H9HA26
FBXL18
33
LLPS-Nol-3735
ENSNLEG00000005598.2
G1R0P9
FRMD8
34
LLPS-Nol-3027
ENSNLEG00000016218.3
G1S2J4
FUS
35
LLPS-Nol-4496
ENSNLEG00000015547.2
G1S053
FYTTD1
36
LLPS-Nol-2567
ENSNLEG00000005074.2
A0A2I3G294
GSK3B
37
LLPS-Nol-1430
ENSNLEG00000013874.3
A0A2I3HYP2
HIF1A
38
LLPS-Nol-3519
ENSNLEG00000002481.3
G1QQE6
HIF3A
39
LLPS-Nol-2047
ENSNLEG00000031145.1
A0A2I3H8I5
HIPK2
40
LLPS-Nol-3152
ENSNLEG00000017659.2
G1S7F5
HNRNPA1
41
LLPS-Nol-2764
ENSNLEG00000014918.3
G1RY30
HNRNPA2B1
42
LLPS-Nol-0670
ENSNLEG00000003486.3
A0A2I3GEF5
HNRNPK
43
LLPS-Nol-0333
ENSNLEG00000019161.2
G1SBW1
HSPA6
44
LLPS-Nol-2249
ENSNLEG00000000827.3
G1QJ78
HSPH1
45
LLPS-Nol-0721
ENSNLEG00000010440.3
G1RHX7
ILF2
46
LLPS-Nol-2510
ENSNLEG00000012290.2
G1RP09
ILF3
47
LLPS-Nol-3295
ENSNLEG00000018032.2
A0A2I3GY61
IVNS1ABP
48
LLPS-Nol-0024
ENSNLEG00000001749.3
G1QMK1
KPNA2
49
LLPS-Nol-1631
ENSNLEG00000018488.1
H9HA54
LOC100607684
50
LLPS-Nol-0485
ENSNLEG00000013541.2
G1RT21
LOC101178583
51
LLPS-Nol-1701
ENSNLEG00000029023.1
A0A2I3GQ28
LOC101179053
52
LLPS-Nol-0606
ENSNLEG00000030598.1
A0A2I3HLW4
LOC105738076
53
LLPS-Nol-3032
ENSNLEG00000017987.3
A0A2I3G4C3
MAGOH
54
LLPS-Nol-3480
ENSNLEG00000027715.1
A0A2I3HVP4
NAGK
55
LLPS-Nol-0550
ENSNLEG00000001278.3
A0A2I3HAP7
NONO
56
LLPS-Nol-0565
ENSNLEG00000005234.3
G1QZG8
NOSIP
57
LLPS-Nol-2015
ENSNLEG00000017282.2
G1S650
NR5A1
58
LLPS-Nol-4202
ENSNLEG00000003642.2
G1QTX9
NSRP1
59
LLPS-Nol-0604
ENSNLEG00000014473.3
G1RWI3
NUAK2
60
LLPS-Nol-2433
ENSNLEG00000004123.3
G1QVS6
NXF1
61
LLPS-Nol-0674
ENSNLEG00000004149.2
G1QVQ9
OGG1
62
LLPS-Nol-3421
ENSNLEG00000003511.2
G1QTG8
P2RY12
63
LLPS-Nol-0187
ENSNLEG00000018722.2
G1SAQ4
PCBP1
64
LLPS-Nol-1372
ENSNLEG00000006023.3
G1R297
PLRG1
65
LLPS-Nol-3709
ENSNLEG00000004068.3
G1QVI0
PNN
66
LLPS-Nol-0388
ENSNLEG00000027463.1
A0A2I3GEW5
PPIG
67
LLPS-Nol-1856
ENSNLEG00000013618.3
A0A2I3GKY0
PRPF19
68
LLPS-Nol-0667
ENSNLEG00000000897.3
G1QJF9
PRPF8
69
LLPS-Nol-4628
ENSNLEG00000013092.2
G1RRR8
PSMA3
70
LLPS-Nol-0476
ENSNLEG00000001294.3
G1QKW3
PSPC1
71
LLPS-Nol-3040
ENSNLEG00000012826.2
G1RQQ6
RAPGEF1
72
LLPS-Nol-2136
ENSNLEG00000033350.1
A0A2I3HXL6
RBM17
73
LLPS-Nol-0357
ENSNLEG00000014792.2
G1RXM8
RBM23
74
LLPS-Nol-2214
ENSNLEG00000015325.3
A0A2I3HJB0
RBMX2
75
LLPS-Nol-4212
ENSNLEG00000008887.2
G1RC79
RNF151
76
LLPS-Nol-0191
ENSNLEG00000009243.3
A0A2I3HR57
RNPS1
77
LLPS-Nol-1380
ENSNLEG00000017599.2
G1S769
SARNP
78
LLPS-Nol-1040
ENSNLEG00000005236.3
G1QZP0
SF1
79
LLPS-Nol-0872
ENSNLEG00000003686.3
G1QU96
SF3A1
80
LLPS-Nol-0042
ENSNLEG00000011720.3
G1RLZ1
SF3A3
81
LLPS-Nol-2475
ENSNLEG00000006861.3
A0A2I3GPD3
SF3B1
82
LLPS-Nol-1021
ENSNLEG00000035521.1
A0A2I3GVW0
SFPQ
83
LLPS-Nol-0157
ENSNLEG00000012983.3
A0A2I3HD56
SMAD3
84
LLPS-Nol-2688
ENSNLEG00000000025.2
A0A2I3GZW1
SNRNP200
85
LLPS-Nol-3159
ENSNLEG00000029859.1
A0A2I3GNQ0
SNRNP35
86
LLPS-Nol-2553
ENSNLEG00000004899.3
G1QYH7
SNRNP70
87
LLPS-Nol-2437
ENSNLEG00000031631.1
A0A2I3HS02
SNRPA
88
LLPS-Nol-0990
ENSNLEG00000000439.3
G1QI33
SNRPA1
89
LLPS-Nol-3663
ENSNLEG00000027459.1
A0A2I3GTZ6
SNRPB2
90
LLPS-Nol-3923
ENSNLEG00000004002.2
G1QVB1
SON
91
LLPS-Nol-4156
ENSNLEG00000003088.3
G1QS99
SPOP
92
LLPS-Nol-0452
ENSNLEG00000008088.3
G1R9I1
SRSF1
93
LLPS-Nol-3967
ENSNLEG00000027520.1
G1RRY1
SRSF10
94
LLPS-Nol-0405
ENSNLEG00000009400.2
G1RE06
SRSF11
95
LLPS-Nol-1331
ENSNLEG00000002547.2
G1QQ65
SRSF2
96
LLPS-Nol-1363
ENSNLEG00000010737.3
A0A2I3HJC3
SRSF3
97
LLPS-Nol-2404
ENSNLEG00000009916.3
G1RFU0
SRSF4
98
LLPS-Nol-2956
ENSNLEG00000016349.3
G1S2V5
SRSF7
99
LLPS-Nol-0036
ENSNLEG00000015661.2
G1S0H2
SRSF9
100
LLPS-Nol-2118
ENSNLEG00000011454.3
G1RLB0
STAT3
101
LLPS-Nol-3149
ENSNLEG00000006738.3
G1R4V2
TAP1
102
LLPS-Nol-3029
ENSNLEG00000017038.3
A0A2I3HC40
TGFBR1
103
LLPS-Nol-3504
ENSNLEG00000035272.1
A0A2I3G2U7
TRA2B
104
LLPS-Nol-3775
ENSNLEG00000005900.2
G1R1S9
TTC14
105
LLPS-Nol-1097
ENSNLEG00000010562.2
G1RI15
U2AF2
106
LLPS-Nol-0232
ENSNLEG00000004915.2
G1QYJ7
U2SURP
107
LLPS-Nol-2179
ENSNLEG00000009680.3
G1RF15
XPO1
108
LLPS-Nol-1230
ENSNLEG00000009202.3
G1RDC8
YTHDC1
109
LLPS-Nol-1889
ENSNLEG00000031914.1
A0A2I3GXI5
ZC3H11A
110
LLPS-Nol-2365
ENSNLEG00000004388.2
G1QWS2
ZNF106
111
LLPS-Nol-0634
ENSNLEG00000010402.2
G1RHG1
ZNF131
112
LLPS-Nol-0799
ENSNLEG00000000140.3
H9H9U7
ZNF688