Mandrillus leucophaeus      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 115 genes.  Reviewed (0 or Unreviewed (115

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Mal-0084
ENSMLEG00000044414.1
A0A2K6AL43
2
LLPS-Mal-0285
ENSMLEG00000043302.1
A0A2K6AEQ5
3
LLPS-Mal-0415
ENSMLEG00000037790.1
A0A2K5ZH90
4
LLPS-Mal-0590
ENSMLEG00000038291.1
A0A2K5ZKL2
5
LLPS-Mal-0598
ENSMLEG00000034623.1
A0A2K5YZ48
6
LLPS-Mal-0871
ENSMLEG00000038928.1
A0A2K5ZNS0
7
LLPS-Mal-1972
ENSMLEG00000030812.1
A0A2K5YCI1
8
LLPS-Mal-2008
ENSMLEG00000010643.1
A0A2K5XH19
9
LLPS-Mal-2402
ENSMLEG00000002279.1
A0A2K5XBU3
10
LLPS-Mal-2436
ENSMLEG00000004617.1
A0A2K5XCY9
11
LLPS-Mal-2668
ENSMLEG00000029802.1
A0A2K5Y6R7
12
LLPS-Mal-2921
ENSMLEG00000039509.1
A0A2K5ZS38
13
LLPS-Mal-3299
ENSMLEG00000033959.1
A0A2K5YVF2
14
LLPS-Mal-3609
ENSMLEG00000016225.1
A0A2K5XK79
15
LLPS-Mal-1649
ENSMLEG00000038874.1
A0A2K5ZPG6
AGO2
16
LLPS-Mal-4305
ENSMLEG00000027638.1
A0A2K5XVA2
AKAP17A
17
LLPS-Mal-4670
ENSMLEG00000043353.1
A0A2K6AF17
ALYREF
18
LLPS-Mal-3046
ENSMLEG00000041410.1
A0A2K6A393
ANXA10
19
LLPS-Mal-0189
ENSMLEG00000032844.1
A0A2K5YP39
ANXA2
20
LLPS-Mal-4390
ENSMLEG00000030611.1
A0A2K5YBU2
ATR
21
LLPS-Mal-1356
ENSMLEG00000036312.1
A0A2K5Z970
BCAS2
22
LLPS-Mal-3400
ENSMLEG00000031172.1
A0A2K5YEP7
C9orf78
23
LLPS-Mal-1977
ENSMLEG00000006303.1
A0A2K5XEA9
CARM1
24
LLPS-Mal-2625
ENSMLEG00000029049.1
A0A2K5Y2D6
CASC3
25
LLPS-Mal-1699
ENSMLEG00000032312.1
A0A2K5YLB6
CCNL1
26
LLPS-Mal-0154
ENSMLEG00000030582.1
A0A2K5YBD4
CDC5L
27
LLPS-Mal-0416
ENSMLEG00000033423.1
A0A2K5YSG6
CDK7
28
LLPS-Mal-1958
ENSMLEG00000012779.1
A0A2K5XIA2
CDK9
29
LLPS-Mal-3334
ENSMLEG00000038004.1
A0A2K5ZIQ2
CDKL5
30
LLPS-Mal-1189
ENSMLEG00000040845.1
A0A2K5ZZX4
COP1
31
LLPS-Mal-0894
ENSMLEG00000032054.1
A0A2K5YKG0
CSNK1A1
32
LLPS-Mal-1710
ENSMLEG00000043791.1
A0A2K6AHM2
DDX39B
33
LLPS-Mal-3892
ENSMLEG00000033516.1
A0A2K5YTP2
DDX46
34
LLPS-Mal-3764
ENSMLEG00000030324.1
A0A2K5Y9R9
DGCR8
35
LLPS-Mal-1709
ENSMLEG00000037135.1
A0A2K5ZDH0
DNAJB1
36
LLPS-Mal-0041
ENSMLEG00000017441.1
A0A2K5XKX4
DNAJC17
37
LLPS-Mal-1291
ENSMLEG00000035913.1
A0A2K5Z6I2
DYRK3
38
LLPS-Mal-2938
ENSMLEG00000025756.1
A0A2K5XRY9
EGF
39
LLPS-Mal-2411
ENSMLEG00000033798.1
A0A2K5YUF9
ERH
40
LLPS-Mal-2806
ENSMLEG00000038086.1
A0A2K5ZJ11
EZH1
41
LLPS-Mal-0665
ENSMLEG00000031982.1
A0A2K5YJ61
FAM76B
42
LLPS-Mal-3896
ENSMLEG00000032664.1
A0A2K5YP05
FANCI
43
LLPS-Mal-2843
ENSMLEG00000029758.1
A0A2K5Y6L9
FGFR1
44
LLPS-Mal-0504
ENSMLEG00000025942.1
A0A2K5XS30
FRMD8
45
LLPS-Mal-0523
ENSMLEG00000038040.1
A0A2K5ZIM2
FUS
46
LLPS-Mal-2631
ENSMLEG00000033370.1
A0A2K5YS43
FYTTD1
47
LLPS-Mal-2576
ENSMLEG00000028509.1
A0A2K5XZA4
GLI3
48
LLPS-Mal-0046
ENSMLEG00000036229.1
A0A2K5Z9X6
GSK3B
49
LLPS-Mal-1841
ENSMLEG00000032405.1
A0A2K5YLI9
HIF1A
50
LLPS-Mal-0069
ENSMLEG00000030835.1
A0A2K5YCN7
HIF3A
51
LLPS-Mal-2132
ENSMLEG00000043975.1
A0A2K6AIQ6
HIPK2
52
LLPS-Mal-1267
ENSMLEG00000040848.1
A0A2K5ZZW9
HNRNPA2B1
53
LLPS-Mal-2558
ENSMLEG00000041139.1
A0A2K6A2W9
HNRNPK
54
LLPS-Mal-1293
ENSMLEG00000030837.1
A0A2K5YCP4
HSPH1
55
LLPS-Mal-0487
ENSMLEG00000037913.1
A0A2K5ZI61
ILF2
56
LLPS-Mal-2795
ENSMLEG00000042847.1
A0A2K6AC37
ILF3
57
LLPS-Mal-0860
ENSMLEG00000038792.1
A0A2K5ZNE8
IVNS1ABP
58
LLPS-Mal-0260
ENSMLEG00000044144.1
A0A2K6AJR5
LUC7L
59
LLPS-Mal-4478
ENSMLEG00000042925.1
A0A2K6ACI3
MAGOH
60
LLPS-Mal-3429
ENSMLEG00000037999.1
A0A2K5ZIF5
NAGK
61
LLPS-Mal-0513
ENSMLEG00000033533.1
A0A2K5YT01
NKAP
62
LLPS-Mal-2399
ENSMLEG00000042452.1
A0A2K6A9N4
NONO
63
LLPS-Mal-1804
ENSMLEG00000030997.1
A0A2K5YDP5
NOSIP
64
LLPS-Mal-0708
ENSMLEG00000030657.1
A0A2K5YBP6
NR5A1
65
LLPS-Mal-0537
ENSMLEG00000042611.1
A0A2K6AAD7
NSRP1
66
LLPS-Mal-3307
ENSMLEG00000040864.1
A0A2K5ZZW1
NUAK2
67
LLPS-Mal-1651
ENSMLEG00000035399.1
A0A2K5Z3J8
OGG1
68
LLPS-Mal-4379
ENSMLEG00000022957.1
A0A2K5XP54
P2RY12
69
LLPS-Mal-1507
ENSMLEG00000027389.1
A0A2K5XUE3
PCBP1
70
LLPS-Mal-1736
ENSMLEG00000037863.1
A0A2K5ZHY6
PLRG1
71
LLPS-Mal-0961
ENSMLEG00000033155.1
A0A2K5YR21
PNN
72
LLPS-Mal-4106
ENSMLEG00000042390.1
A0A2K6A970
PPIG
73
LLPS-Mal-2354
ENSMLEG00000043312.1
A0A2K6AEQ2
PRPF19
74
LLPS-Mal-2788
ENSMLEG00000037937.1
A0A2K5ZI51
PRPF8
75
LLPS-Mal-3069
ENSMLEG00000041984.1
A0A2K6A6M9
PSMA3
76
LLPS-Mal-0491
ENSMLEG00000039043.1
A0A2K5ZPF4
PSPC1
77
LLPS-Mal-1516
ENSMLEG00000013865.1
A0A2K5XJI2
PTBP1
78
LLPS-Mal-1856
ENSMLEG00000034803.1
A0A2K5Z0J0
RAPGEF1
79
LLPS-Mal-3290
ENSMLEG00000029340.1
A0A2K5Y472
RBM17
80
LLPS-Mal-2709
ENSMLEG00000039954.1
A0A2K5ZUP7
RBM23
81
LLPS-Mal-3550
ENSMLEG00000028723.1
A0A2K5Y0D3
RBMX2
82
LLPS-Mal-1091
ENSMLEG00000036928.1
A0A2K5ZCD2
RNPS1
83
LLPS-Mal-1823
ENSMLEG00000040706.1
A0A2K6A085
SF1
84
LLPS-Mal-1496
ENSMLEG00000041908.1
A0A2K6A644
SF3A1
85
LLPS-Mal-1129
ENSMLEG00000030641.1
A0A2K5YC36
SF3A3
86
LLPS-Mal-0737
ENSMLEG00000026141.1
A0A2K5XSB4
SF3B1
87
LLPS-Mal-1848
ENSMLEG00000032633.1
A0A2K5YMS3
SMAD3
88
LLPS-Mal-1939
ENSMLEG00000019083.1
A0A2K5XLU4
SNRNP200
89
LLPS-Mal-1024
ENSMLEG00000040998.1
A0A2K6A0K4
SNRNP35
90
LLPS-Mal-2074
ENSMLEG00000030967.1
A0A2K5YDK4
SNRNP70
91
LLPS-Mal-0632
ENSMLEG00000039593.1
A0A2K5ZSN8
SNRPA
92
LLPS-Mal-0158
ENSMLEG00000037995.1
A0A2K5ZIC3
SNRPA1
93
LLPS-Mal-1443
ENSMLEG00000029953.1
A0A2K5Y7N2
SNRPB2
94
LLPS-Mal-2880
ENSMLEG00000035039.1
A0A2K5Z1P1
SON
95
LLPS-Mal-3295
ENSMLEG00000043280.1
A0A2K6AEJ9
SPOP
96
LLPS-Mal-1215
ENSMLEG00000041906.1
A0A2K6A674
SRRM2
97
LLPS-Mal-3635
ENSMLEG00000040509.1
A0A2K5ZXS2
SRSF1
98
LLPS-Mal-4411
ENSMLEG00000016013.1
A0A2K5XK46
SRSF10
99
LLPS-Mal-3831
ENSMLEG00000041592.1
A0A2K6A4B7
SRSF11
100
LLPS-Mal-0005
ENSMLEG00000025525.1
A0A2K5XRK6
SRSF2
101
LLPS-Mal-3291
ENSMLEG00000041179.1
A0A2K6A1R7
SRSF3
102
LLPS-Mal-3979
ENSMLEG00000031619.1
A0A2K5YHA5
SRSF4
103
LLPS-Mal-2034
ENSMLEG00000038852.1
A0A2K5ZNA6
SRSF7
104
LLPS-Mal-3330
ENSMLEG00000030447.1
A0A2K5YAN6
STAT3
105
LLPS-Mal-1679
ENSMLEG00000042023.1
A0A2K6A6X4
TAP1
106
LLPS-Mal-0832
ENSMLEG00000034814.1
A0A2K5Z1D7
TGFBR1
107
LLPS-Mal-0481
ENSMLEG00000005550.1
A0A2K5XDL8
TRA2B
108
LLPS-Mal-4187
ENSMLEG00000000458.1
A0A2K5XAF5
TTC14
109
LLPS-Mal-1110
ENSMLEG00000032219.1
A0A2K5YKG8
U2AF2
110
LLPS-Mal-1504
ENSMLEG00000021031.1
A0A2K5XN37
U2SURP
111
LLPS-Mal-2393
ENSMLEG00000032004.1
A0A2K5YJR1
XPO1
112
LLPS-Mal-1172
ENSMLEG00000042147.1
A0A2K6A7T6
YTHDC1
113
LLPS-Mal-1912
ENSMLEG00000009417.1
A0A2K5XGC0
ZC3H11A
114
LLPS-Mal-2820
ENSMLEG00000040530.1
A0A2K5ZXZ0
ZNF106
115
LLPS-Mal-2670
ENSMLEG00000044036.1
A0A2K6AJ25
ZNF131