Magnaporthe poae      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 25 genes.  Reviewed (0 or Unreviewed (25

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Map-0155
MAPG_00588
A0A0C4DLE7
MAPG_00588
2
LLPS-Map-0626
MAPG_01084
A0A0C4DMS2
MAPG_01084
3
LLPS-Map-1280
MAPG_01134
A0A0C4DMW9
MAPG_01134
4
LLPS-Map-0906
MAPG_01973
A0A0C4DQ36
MAPG_01973
5
LLPS-Map-0296
MAPG_02124
A0A0C4DQI1
MAPG_02124
6
LLPS-Map-0673
MAPG_03228
A0A0C4DTG1
MAPG_03228
7
LLPS-Map-0563
MAPG_03729
A0A0C4DUT6
MAPG_03729
8
LLPS-Map-0866
MAPG_03958
A0A0C4DVF4
MAPG_03958
9
LLPS-Map-0880
MAPG_04037
A0A0C4DVM9
MAPG_04037
10
LLPS-Map-0523
MAPG_05067
A0A0C4DYE6
MAPG_05067
11
LLPS-Map-0838
MAPG_05152
A0A0C4DYM6
MAPG_05152
12
LLPS-Map-0275
MAPG_05726
A0A0C4E058
MAPG_05726
13
LLPS-Map-1344
MAPG_06427
A0A0C4E201
MAPG_06427
14
LLPS-Map-0426
MAPG_06715
A0A0C4E2S6
MAPG_06715
15
LLPS-Map-1001
MAPG_07160
A0A0C4E3Y2
MAPG_07160
16
LLPS-Map-0962
MAPG_07517
A0A0C4E4W3
MAPG_07517
17
LLPS-Map-0740
MAPG_07775
A0A0C4E5K3
MAPG_07775
18
LLPS-Map-0687
MAPG_07894
A0A0C4E5W7
MAPG_07894
19
LLPS-Map-0926
MAPG_07972
A0A0C4E641
MAPG_07972
20
LLPS-Map-0757
MAPG_08136
A0A0C4E6J4
MAPG_08136
21
LLPS-Map-0236
MAPG_09708
A0A0C4EAN2
MAPG_09708
22
LLPS-Map-1014
MAPG_09987
A0A0C4EBD9
MAPG_09987
23
LLPS-Map-1171
MAPG_11666
A0A0C4EFV7
MAPG_11666
24
LLPS-Map-0174
MAPG_11763
A0A0C4EG44
MAPG_11763
25
LLPS-Map-0521
MAPG_11764
A0A0C4EG45
MAPG_11764