Gorilla gorilla      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 115 genes.  Reviewed (0 or Unreviewed (115

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Gog-0029
ENSGGOG00000005516.3
G3QRZ4
2
LLPS-Gog-0031
ENSGGOG00000026106.2
G3SA52
3
LLPS-Gog-0032
ENSGGOG00000025919.2
A0A2I2Z470
4
LLPS-Gog-0066
ENSGGOG00000005808.3
G3QSQ3
5
LLPS-Gog-0089
ENSGGOG00000000051.3
A0A2I2ZV71
6
LLPS-Gog-0137
ENSGGOG00000006613.3
G3QUR2
7
LLPS-Gog-0139
ENSGGOG00000007004.3
A0A2I2ZH49
8
LLPS-Gog-0147
ENSGGOG00000028077.2
G3RZB2
9
LLPS-Gog-0169
ENSGGOG00000012409.3
G3R9M2
10
LLPS-Gog-0184
ENSGGOG00000008245.3
G3SGC4
11
LLPS-Gog-0190
ENSGGOG00000009264.3
A0A2I2Z3A2
12
LLPS-Gog-0245
ENSGGOG00000002026.3
G3QI08
13
LLPS-Gog-0263
ENSGGOG00000013928.3
A0A2I2YA81
14
LLPS-Gog-0267
ENSGGOG00000003634.3
A0A2I2ZVD2
15
LLPS-Gog-0302
ENSGGOG00000014378.3
G3S726
16
LLPS-Gog-0330
ENSGGOG00000014469.3
G3RZI1
17
LLPS-Gog-0344
ENSGGOG00000005774.3
G3QSL6
18
LLPS-Gog-0352
ENSGGOG00000017110.3
G3RXK2
19
LLPS-Gog-0426
ENSGGOG00000012631.3
G3RA68
20
LLPS-Gog-0445
ENSGGOG00000003937.3
G3QMW5
21
LLPS-Gog-0523
ENSGGOG00000004050.4
G3QN68
22
LLPS-Gog-0595
ENSGGOG00000004386.3
G3QP16
23
LLPS-Gog-0665
ENSGGOG00000036399.1
A0A2I2ZQB7
24
LLPS-Gog-0682
ENSGGOG00000013311.3
G3RBW7
25
LLPS-Gog-0687
ENSGGOG00000005090.3
A0A2I2YUQ8
26
LLPS-Gog-0690
ENSGGOG00000034878.2
A0A2I2ZAW1
27
LLPS-Gog-0792
ENSGGOG00000014275.3
A0A2I2ZM53
28
LLPS-Gog-0817
ENSGGOG00000015296.3
G3RMK9
29
LLPS-Gog-0818
ENSGGOG00000011696.3
G3R7T1
30
LLPS-Gog-0852
ENSGGOG00000003025.3
G3QKK0
31
LLPS-Gog-0858
ENSGGOG00000003414.3
G3QLK0
32
LLPS-Gog-0899
ENSGGOG00000010958.3
G3R5U8
33
LLPS-Gog-0900
ENSGGOG00000028130.2
G3S509
34
LLPS-Gog-0941
ENSGGOG00000002444.3
G3QJ23
35
LLPS-Gog-0942
ENSGGOG00000004438.3
A0A2I2ZAR8
36
LLPS-Gog-0950
ENSGGOG00000013349.3
G3RC03
37
LLPS-Gog-0990
ENSGGOG00000011054.3
G3R636
38
LLPS-Gog-1005
ENSGGOG00000044184.1
A0A2I2ZL22
39
LLPS-Gog-1006
ENSGGOG00000003375.3
A0A2I2Z123
40
LLPS-Gog-1038
ENSGGOG00000041216.1
A0A2I2Y4E2
41
LLPS-Gog-1085
ENSGGOG00000000780.3
G3QES1
42
LLPS-Gog-1093
ENSGGOG00000007367.3
G3QWP9
43
LLPS-Gog-1275
ENSGGOG00000008994.3
G3R0U5
44
LLPS-Gog-1276
ENSGGOG00000017072.3
G3RLL0
45
LLPS-Gog-1295
ENSGGOG00000024610.2
G3SIQ1
46
LLPS-Gog-1320
ENSGGOG00000014259.3
G3REC9
47
LLPS-Gog-1331
ENSGGOG00000011665.3
G3R7N6
48
LLPS-Gog-1360
ENSGGOG00000003525.3
G3RTU6
49
LLPS-Gog-1369
ENSGGOG00000014037.3
G3RDT3
50
LLPS-Gog-1401
ENSGGOG00000004144.3
G3QNF4
51
LLPS-Gog-1509
ENSGGOG00000003957.3
G3SJ03
52
LLPS-Gog-1517
ENSGGOG00000026439.2
A0A2I2Z460
53
LLPS-Gog-1623
ENSGGOG00000028233.2
G3SIP8
54
LLPS-Gog-1652
ENSGGOG00000005174.3
G3QR47
55
LLPS-Gog-1658
ENSGGOG00000027142.2
G3SGY1
56
LLPS-Gog-1668
ENSGGOG00000012027.3
G3RVS8
57
LLPS-Gog-1698
ENSGGOG00000013926.3
G3RDH8
58
LLPS-Gog-1702
ENSGGOG00000006249.3
G3SAX2
59
LLPS-Gog-1706
ENSGGOG00000013843.3
A0A2I2YA69
60
LLPS-Gog-1740
ENSGGOG00000027535.2
G3RYW0
61
LLPS-Gog-1834
ENSGGOG00000006784.4
G3QV80
62
LLPS-Gog-1846
ENSGGOG00000024288.2
G3SBD1
63
LLPS-Gog-1901
ENSGGOG00000005989.3
G3QT53
64
LLPS-Gog-2084
ENSGGOG00000016488.3
A0A2I2ZZ31
65
LLPS-Gog-2095
ENSGGOG00000008083.3
A0A2I2YTG6
66
LLPS-Gog-2118
ENSGGOG00000001814.3
G3QHG0
67
LLPS-Gog-2146
ENSGGOG00000003707.3
G3RPN0
68
LLPS-Gog-2177
ENSGGOG00000009844.3
G3R305
69
LLPS-Gog-2220
ENSGGOG00000000392.3
G3QDR1
70
LLPS-Gog-2277
ENSGGOG00000013409.3
G3RC57
71
LLPS-Gog-2320
ENSGGOG00000008226.3
A0A2I2ZMR7
72
LLPS-Gog-2452
ENSGGOG00000007594.3
G3QX92
73
LLPS-Gog-2642
ENSGGOG00000003185.3
A0A2I2ZSH0
74
LLPS-Gog-2696
ENSGGOG00000013935.3
G3RDI6
75
LLPS-Gog-2709
ENSGGOG00000000614.3
A0A2I2ZSQ0
76
LLPS-Gog-2785
ENSGGOG00000009738.3
G3R2Q2
77
LLPS-Gog-2843
ENSGGOG00000013080.3
G3RBC6
78
LLPS-Gog-2864
ENSGGOG00000002252.4
G3QIK5
79
LLPS-Gog-2934
ENSGGOG00000013217.3
G3RBN1
80
LLPS-Gog-2995
ENSGGOG00000010481.3
G3R4M3
81
LLPS-Gog-3003
ENSGGOG00000009216.3
G3RTX8
82
LLPS-Gog-3068
ENSGGOG00000003335.3
G3QLD4
83
LLPS-Gog-3092
ENSGGOG00000005563.3
A0A2I2YQ79
84
LLPS-Gog-3252
ENSGGOG00000013437.3
G3RCA5
85
LLPS-Gog-3254
ENSGGOG00000014620.3
G3RFA0
86
LLPS-Gog-3267
ENSGGOG00000007800.4
G3QXS3
87
LLPS-Gog-3269
ENSGGOG00000022609.2
G3SK95
88
LLPS-Gog-3379
ENSGGOG00000001190.3
G3QFU4
89
LLPS-Gog-3481
ENSGGOG00000015707.3
G3RI38
90
LLPS-Gog-3512
ENSGGOG00000015814.3
A0A2I2YTJ4
91
LLPS-Gog-3576
ENSGGOG00000021958.2
G3S4Z8
92
LLPS-Gog-3620
ENSGGOG00000008648.3
A0A2I2YL70
93
LLPS-Gog-3664
ENSGGOG00000009438.3
A0A2I2YAW2
94
LLPS-Gog-3752
ENSGGOG00000014773.3
G3RFP3
95
LLPS-Gog-3772
ENSGGOG00000004090.3
A0A2I2YHN9
96
LLPS-Gog-3783
ENSGGOG00000007774.3
G3QXR0
97
LLPS-Gog-3801
ENSGGOG00000015313.3
G3S272
98
LLPS-Gog-3876
ENSGGOG00000015936.3
G3RIN4
99
LLPS-Gog-3890
ENSGGOG00000042717.1
A0A2I2YSV3
100
LLPS-Gog-3900
ENSGGOG00000004751.3
G3QPZ4
101
LLPS-Gog-3930
ENSGGOG00000007910.3
G3QY15
102
LLPS-Gog-3965
ENSGGOG00000013330.3
G3RBY6
103
LLPS-Gog-4216
ENSGGOG00000007551.3
A0A2I2ZWC7
104
LLPS-Gog-4356
ENSGGOG00000005067.3
G3QQU3
105
LLPS-Gog-4402
ENSGGOG00000000695.3
G3QEI8
106
LLPS-Gog-4418
ENSGGOG00000001911.3
G3RPH1
107
LLPS-Gog-4655
ENSGGOG00000010796.3
G3R5F5
108
LLPS-Gog-4659
ENSGGOG00000009376.3
G3R1S9
109
LLPS-Gog-4770
ENSGGOG00000014001.3
G3RDP6
110
LLPS-Gog-4823
ENSGGOG00000013358.3
G3RC13
111
LLPS-Gog-2446
ENSGGOG00000011412.3
G3R705
AGO2
112
LLPS-Gog-2747
ENSGGOG00000015500.3
G3RHK3
HNRNPK
113
LLPS-Gog-3033
ENSGGOG00000006194.3
G3QTN1
NONO
114
LLPS-Gog-0874
ENSGGOG00000026354.2
G3S092
SFPQ
115
LLPS-Gog-0771
ENSGGOG00000017186.3
G3RLW0
SRSF3