Beauveria bassiana      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Beb-0721
BB8028_0001g06470
A0A2N6P031
bcas2
2
LLPS-Beb-1579
BB8028_0003g10830
A0A2N6NQN0
BM221_004234
3
LLPS-Beb-0412
BB8028_0006g09450
A0A2N6NJ45
BM221_006955
4
LLPS-Beb-0975
BB8028_0009g00270
A0A2N6NEL6
BM221_007863
5
LLPS-Beb-0523
BB8028_0001g07920
A0A2N6P0K1
brr2
6
LLPS-Beb-0267
BB8028_0002g12780
A0A2N6NG32
cef-1
7
LLPS-Beb-0566
BB8028_0001g14450
A0A2N6NH39
ctnnbl1
8
LLPS-Beb-0549
BB8028_0003g02060
A0A2N6NKK5
gsk3
9
LLPS-Beb-0780
BB8028_0002g03540
A0A2N6NUL0
lea-1
10
LLPS-Beb-1212
BB8028_0003g15350
A0A2N6NS43
lkh1_0
11
LLPS-Beb-1318
BB8028_0009g00890
A0A2N6NEN4
MEX67
12
LLPS-Beb-1094
BB8028_0004g09420
A0A2N6NX28
mlo3
13
LLPS-Beb-1458
BB8028_0002g11460
A0A2N6NA67
msl1
14
LLPS-Beb-0342
BB8028_0003g06280
A0A2N6NLW1
Ogg1
15
LLPS-Beb-0973
BB8028_0001g08230
A0A2N6P0P4
PRE10
16
LLPS-Beb-0723
BB8028_0003g06290
A0A2N6NLV6
prp10
17
LLPS-Beb-0594
BB8028_0005g06190
A0A2N6NMM4
prp19
18
LLPS-Beb-0216
BB8028_0003g06270
A0A2N6NLW3
prp2
19
LLPS-Beb-0211
BB8028_0001g14170
A0A2N6NGU9
prp46
20
LLPS-Beb-0406
BB8028_0002g06430
A0A2N6NTQ7
PRP5
21
LLPS-Beb-1242
BB8028_0004g05720
A0A2N6NY69
Prpf8
22
LLPS-Beb-0659
BB8028_0006g03940
A0A2N6NE41
R05G6.4
23
LLPS-Beb-0672
BB8028_0005g07280
A0A2N6NME0
rad3
24
LLPS-Beb-0576
BB8028_0001g17180
A0A2N6NHW9
RBM17
25
LLPS-Beb-0010
BB8028_0006g07510
A0A2N6NJS5
Rbmx2
26
LLPS-Beb-1207
BB8028_0005g09990
A0A2N6NAJ2
sap114
27
LLPS-Beb-0433
BB8028_0005g01070
A0A2N6NP60
sap61
28
LLPS-Beb-0641
BB8028_0001g05350
A0A2N6NZV4
sap62
29
LLPS-Beb-1335
BB8028_0006g09130
A0A2N6NJA5
U2SURP
30
LLPS-Beb-1147
BB8028_0003g11560
A0A2N6NQX8
usp101
31
LLPS-Beb-0377
BB8028_0004g08490
A0A2N6NXE3
usp102
32
LLPS-Beb-1499
BB8028_0003g10070
A0A2N6NQG9
usp106
33
LLPS-Beb-1027
BB8028_0004g10370
A0A2N6NWT2
xpo1