Zymoseptoria tritici      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 31 genes.  Reviewed (0 or Unreviewed (31

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Zyt-0167
Mycgr3G55692
F9X4K1
ADK1
2
LLPS-Zyt-0058
Mycgr3G109241
F9XA30
ERG24
3
LLPS-Zyt-0975
Mycgr3G96235
F9XL50
LSM4
4
LLPS-Zyt-0896
Mycgr3G98201
F9WZL6
MgSNF1
5
LLPS-Zyt-0710
Mycgr3G101160
F9XJ81
MYCGRDRAFT_101160
6
LLPS-Zyt-0106
Mycgr3G101609
F9XN89
MYCGRDRAFT_101609
7
LLPS-Zyt-0801
Mycgr3G102365
F9WWI5
MYCGRDRAFT_102365
8
LLPS-Zyt-0448
Mycgr3G105388
F9XGY0
MYCGRDRAFT_105388
9
LLPS-Zyt-1072
Mycgr3G105431
F9XHM0
MYCGRDRAFT_105431
10
LLPS-Zyt-1382
Mycgr3G106945
F9WYZ3
MYCGRDRAFT_106945
11
LLPS-Zyt-1154
Mycgr3G108776
F9X567
MYCGRDRAFT_108776
12
LLPS-Zyt-0661
Mycgr3G108919
F9X9W4
MYCGRDRAFT_108919
13
LLPS-Zyt-0573
Mycgr3G111497
F9XNV0
MYCGRDRAFT_111497
14
LLPS-Zyt-1046
Mycgr3G111551
F9XP67
MYCGRDRAFT_111551
15
LLPS-Zyt-0750
Mycgr3G35430
F9X1R9
MYCGRDRAFT_35430
16
LLPS-Zyt-1076
Mycgr3G38046
F9X7X6
MYCGRDRAFT_38046
17
LLPS-Zyt-0645
Mycgr3G48728
F9XLT9
MYCGRDRAFT_48728
18
LLPS-Zyt-0890
Mycgr3G49141
F9XLF2
MYCGRDRAFT_49141
19
LLPS-Zyt-0584
Mycgr3G56466
F9X645
MYCGRDRAFT_56466
20
LLPS-Zyt-1112
Mycgr3G57670
F9X8V1
MYCGRDRAFT_57670
21
LLPS-Zyt-1144
Mycgr3G65370
F9WYY6
MYCGRDRAFT_65370
22
LLPS-Zyt-0397
Mycgr3G70061
F9X6Y2
MYCGRDRAFT_70061
23
LLPS-Zyt-0234
Mycgr3G72053
F9XC02
MYCGRDRAFT_72053
24
LLPS-Zyt-1036
Mycgr3G73484
F9XE79
MYCGRDRAFT_73484
25
LLPS-Zyt-0995
Mycgr3G76618
F9XME9
MYCGRDRAFT_76618
26
LLPS-Zyt-0791
Mycgr3G88718
F9WXJ6
MYCGRDRAFT_88718
27
LLPS-Zyt-0447
Mycgr3G96640
F9XN14
MYCGRDRAFT_96640
28
LLPS-Zyt-1419
Mycgr3G97328
F9XPV4
MYCGRDRAFT_97328
29
LLPS-Zyt-0666
Mycgr3G99193
F9X2Z8
MYCGRDRAFT_99193
30
LLPS-Zyt-0002
Mycgr3G99873
F9X8Y2
MYCGRDRAFT_99873
31
LLPS-Zyt-0601
Mycgr3G57630
F9X8R8
PYK1