Vigna radiata      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 31 genes.  Reviewed (0 or Unreviewed (31

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Vir-0382
vigra.VC1973A.gnm6.ann1.Vradi0007s02240
A0A1S3TBQ6
LOC106753849
2
LLPS-Vir-1682
vigra.VC1973A.gnm6.ann1.Vradi02g03790
A0A1S3TKI1
LOC106756394
3
LLPS-Vir-0677
vigra.VC1973A.gnm6.ann1.Vradi04g02300
A0A1S3TTB6
LOC106758587
4
LLPS-Vir-1007
vigra.VC1973A.gnm6.ann1.Vradi05g08520
A0A1S3U1E1
LOC106760912
5
LLPS-Vir-1071
vigra.VC1973A.gnm6.ann1.Vradi05g08400
A0A1S3U6H3
LOC106762312
6
LLPS-Vir-1227
vigra.VC1973A.gnm6.ann1.Vradi06g12440
A0A1S3UBT1
LOC106763839
7
LLPS-Vir-1777
vigra.VC1973A.gnm6.ann1.Vradi06g15030
A0A1S3UFQ2
LOC106764874
8
LLPS-Vir-0867
vigra.VC1973A.gnm6.ann1.Vradi06g00410
A0A1S3UFZ7
LOC106765000
9
LLPS-Vir-0508
vigra.VC1973A.gnm6.ann1.Vradi07g13600
A0A1S3UIH2
LOC106765585
10
LLPS-Vir-1605
vigra.VC1973A.gnm6.ann1.Vradi07g01890
A0A1S3UIB6
LOC106765612
11
LLPS-Vir-0754
vigra.VC1973A.gnm6.ann1.Vradi07g29310
A0A1S3UT76
LOC106768505
12
LLPS-Vir-1388
vigra.VC1973A.gnm6.ann1.Vradi07g27990
A0A1S3UWP1
LOC106769406
13
LLPS-Vir-1461
vigra.VC1973A.gnm6.ann1.Vradi01g02290
A0A1S3V116
LOC106770717
14
LLPS-Vir-0706
vigra.VC1973A.gnm6.ann1.Vradi08g11530
A0A1S3V164
LOC106770768
15
LLPS-Vir-1659
vigra.VC1973A.gnm6.ann1.Vradi01g07660
A0A1S3V3L7
LOC106771421
16
LLPS-Vir-0380
vigra.VC1973A.gnm6.ann1.Vradi08g22060
A0A1S3V5G8
LOC106771967
17
LLPS-Vir-0107
vigra.VC1973A.gnm6.ann1.Vradi08g17540
A0A1S3V7P8
LOC106772465
18
LLPS-Vir-1424
vigra.VC1973A.gnm6.ann1.Vradi01g00090
A0A1S3V9A3
LOC106772826
19
LLPS-Vir-1779
vigra.VC1973A.gnm6.ann1.Vradi01g02160
A0A1S3VCF3
LOC106773665
20
LLPS-Vir-0022
vigra.VC1973A.gnm6.ann1.Vradi01g11900
A0A1S3VCX9
LOC106773748
21
LLPS-Vir-0569
vigra.VC1973A.gnm6.ann1.Vradi09g02670
A0A1S3VEM9
LOC106774193
22
LLPS-Vir-0091
vigra.VC1973A.gnm6.ann1.Vradi09g04740
A0A1S3VEI4
LOC106774222
23
LLPS-Vir-0000
vigra.VC1973A.gnm6.ann1.Vradi09g02300
A0A1S3VEB0
LOC106774279
24
LLPS-Vir-0595
vigra.VC1973A.gnm6.ann1.Vradi01g02270
A0A1S3VF73
LOC106774441
25
LLPS-Vir-0285
vigra.VC1973A.gnm6.ann1.Vradi01g11440
A0A1S3VGQ5
LOC106774768
26
LLPS-Vir-0776
vigra.VC1973A.gnm6.ann1.Vradi11g06730
A0A1S3VRA4
LOC106777530
27
LLPS-Vir-0217
vigra.VC1973A.gnm6.ann1.Vradi02g01610
A0A1S3VWI4
LOC106779030
28
LLPS-Vir-1386
vigra.VC1973A.gnm6.ann1.Vradi0425s00060
A0A1S3VWA4
LOC106779128
29
LLPS-Vir-0965
vigra.VC1973A.gnm6.ann1.Vradi0364s00030
A0A1S3VY70
LOC106779552
30
LLPS-Vir-0237
vigra.VC1973A.gnm6.ann1.Vradi0161s00410
A0A1S3VYT2
LOC106779807
31
LLPS-Vir-1805
vigra.VC1973A.gnm6.ann1.Vradi01g08620
Q9XQB5
rbcS