Solanum tuberosum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 31 genes.  Reviewed (0 or Unreviewed (31

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sot-0013
PGSC0003DMG400017022
M1BFA1
2
LLPS-Sot-0829
PGSC0003DMG400028111
M1CPX1
3
LLPS-Sot-1162
PGSC0003DMG400020916
M1BVM1
4
LLPS-Sot-1436
PGSC0003DMG400005660
M1A476
5
LLPS-Sot-1686
PGSC0003DMG400008857
M1AHB6
6
LLPS-Sot-2048
PGSC0003DMG400030374
M1CZD3
7
LLPS-Sot-0475
PGSC0003DMG400004865
Q2XPV3
102577639
8
LLPS-Sot-1029
PGSC0003DMG400019215
M1BNS7
102578219
9
LLPS-Sot-0527
PGSC0003DMG400003590
M0ZVV4
102578707
10
LLPS-Sot-0401
PGSC0003DMG400002900
M0ZT45
102579731
11
LLPS-Sot-1869
PGSC0003DMG400009160
M1AIT5
102579827
12
LLPS-Sot-2001
PGSC0003DMG400004097
M0ZY49
102580042
13
LLPS-Sot-0505
PGSC0003DMG400025154
M1CCV4
102580702
14
LLPS-Sot-0994
PGSC0003DMG400010340
M1ANQ3
102583587
15
LLPS-Sot-0124
PGSC0003DMG400012452
M1AXE6
102585048
16
LLPS-Sot-0545
PGSC0003DMG400025777
M1CF88
102585145
17
LLPS-Sot-1961
PGSC0003DMG400027073
M1CKU0
102585254
18
LLPS-Sot-1451
PGSC0003DMG400008431
M1AFL5
102585349
19
LLPS-Sot-0985
PGSC0003DMG400032118
M1D518
102585736
20
LLPS-Sot-0693
PGSC0003DMG400008366
M1AFC7
102586015
21
LLPS-Sot-1554
PGSC0003DMG400001320
M0ZLG7
102587420
22
LLPS-Sot-0077
PGSC0003DMG400015187
M1B815
102587831
23
LLPS-Sot-1786
PGSC0003DMG400027667
M1CN89
102589540
24
LLPS-Sot-0643
PGSC0003DMG400012334
M1AWX7
102591981
25
LLPS-Sot-0465
PGSC0003DMG400015862
M1BAR8
102592059
26
LLPS-Sot-1139
PGSC0003DMG400031514
M1D452
102593818
27
LLPS-Sot-0666
PGSC0003DMG400010913
M1AQZ1
102596468
28
LLPS-Sot-0274
PGSC0003DMG400029392
M1CVE9
102598016
29
LLPS-Sot-1215
PGSC0003DMG400026641
M1CJ58
102599745
30
LLPS-Sot-2075
PGSC0003DMG401017733
M1BI36
102601903
31
LLPS-Sot-0849
PGSC0003DMG400014195
M1B498
102602221