Solanum lycopersicum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sol-0010
Solyc08g066050.3
2
LLPS-Sol-0028
Solyc10g078540.2
3
LLPS-Sol-0118
Solyc12g009230.2
4
LLPS-Sol-0142
Solyc03g123840.3
5
LLPS-Sol-0207
Solyc07g063270.3
6
LLPS-Sol-0353
Solyc12g008760.2
7
LLPS-Sol-0522
Solyc09g065080.2
8
LLPS-Sol-0549
Solyc01g099740.3
9
LLPS-Sol-0582
Solyc03g082940.3
10
LLPS-Sol-0638
Solyc02g083350.3
11
LLPS-Sol-0664
Solyc02g081620.3
12
LLPS-Sol-0689
Solyc06g082870.3
13
LLPS-Sol-0693
Solyc06g071770.3
14
LLPS-Sol-0841
Solyc09g009040.3
15
LLPS-Sol-0853
Solyc01g049650.3
16
LLPS-Sol-1040
Solyc03g117120.3
17
LLPS-Sol-1073
Solyc01g044360.3
18
LLPS-Sol-1112
Solyc10g084615.1
19
LLPS-Sol-1256
Solyc07g017950.3
20
LLPS-Sol-1286
Solyc05g056110.3
21
LLPS-Sol-1326
Solyc09g092320.3
22
LLPS-Sol-1387
Solyc01g111780.3
23
LLPS-Sol-1423
Solyc01g005430.3
24
LLPS-Sol-1426
Solyc10g017530.3
25
LLPS-Sol-1540
Solyc04g007280.3
26
LLPS-Sol-1541
Solyc12g088720.2
27
LLPS-Sol-1596
Solyc08g081280.3
28
LLPS-Sol-1626
Solyc05g014980.3
29
LLPS-Sol-1663
Solyc02g087880.3
30
LLPS-Sol-1685
Solyc10g024470.2
31
LLPS-Sol-1742
Solyc06g062860.3
32
LLPS-Sol-1854
Solyc07g054630.3
33
LLPS-Sol-2457
Solyc09g010300.3
34
LLPS-Sol-2513
Solyc07g042180.3
35
LLPS-Sol-1999
Solyc03g115700.3
Q6XNM3
543870
36
LLPS-Sol-0081
Solyc03g096920.3
D1MAF2
Xpo1