Sclerotinia sclerotiorum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 26 genes.  Reviewed (0 or Unreviewed (26

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Scs-0397
SS1G_01606
A7E8H8
adk1
2
LLPS-Scs-0029
SS1G_00023
A7E401
SS1G_00023
3
LLPS-Scs-0724
SS1G_00108
A7E486
SS1G_00108
4
LLPS-Scs-0295
SS1G_00341
A7E4W9
SS1G_00341
5
LLPS-Scs-0002
SS1G_00363
A7E4Z1
SS1G_00363
6
LLPS-Scs-0219
SS1G_02272
A7EAE0
SS1G_02272
7
LLPS-Scs-0585
SS1G_02533
A7EB47
SS1G_02533
8
LLPS-Scs-0922
SS1G_03341
A7EDF1
SS1G_03341
9
LLPS-Scs-0000
SS1G_03492
A7EDV2
SS1G_03492
10
LLPS-Scs-0138
SS1G_03651
A7EEB1
SS1G_03651
11
LLPS-Scs-0235
SS1G_04568
A7EGX6
SS1G_04568
12
LLPS-Scs-0262
SS1G_05467
A7EJH4
SS1G_05467
13
LLPS-Scs-0953
SS1G_05600
A7EJV5
SS1G_05600
14
LLPS-Scs-0165
SS1G_05928
A7EKT1
SS1G_05928
15
LLPS-Scs-0080
SS1G_07008
A7ENV9
SS1G_07008
16
LLPS-Scs-0346
SS1G_07023
A7ENX4
SS1G_07023
17
LLPS-Scs-0554
SS1G_07099
A7EP50
SS1G_07099
18
LLPS-Scs-0266
SS1G_10159
A7EXU4
SS1G_10159
19
LLPS-Scs-0273
SS1G_10171
A7EXV6
SS1G_10171
20
LLPS-Scs-0504
SS1G_10315
A7EYA0
SS1G_10315
21
LLPS-Scs-0667
SS1G_10426
A7EYL0
SS1G_10426
22
LLPS-Scs-0492
SS1G_10974
A7F057
SS1G_10974
23
LLPS-Scs-1117
SS1G_10985
A7F068
SS1G_10985
24
LLPS-Scs-0367
SS1G_11309
A7F139
SS1G_11309
25
LLPS-Scs-0610
SS1G_12081
A7F2D4
SS1G_12081
26
LLPS-Scs-0344
SS1G_12483
A7F4F8
SS1G_12483