Schizosaccharomyces japonicus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Scj-0014
SJAG_02038
B6JZJ8
ADK1
2
LLPS-Scj-0753
SJAG_03070
B6K388
LSM4
3
LLPS-Scj-0694
SJAG_00150
B6JXK8
SJAG_00150
4
LLPS-Scj-0411
SJAG_00943
B6JX17
SJAG_00943
5
LLPS-Scj-1152
SJAG_01222
B6K033
SJAG_01222
6
LLPS-Scj-0051
SJAG_01234
B6K046
SJAG_01234
7
LLPS-Scj-1326
SJAG_01317
B6K0C3
SJAG_01317
8
LLPS-Scj-1082
SJAG_01358
B6K0G5
SJAG_01358
9
LLPS-Scj-0256
SJAG_01412
B6JXU9
SJAG_01412
10
LLPS-Scj-1462
SJAG_01696
B6JYN0
SJAG_01696
11
LLPS-Scj-0047
SJAG_01713
B6JYP8
SJAG_01713
12
LLPS-Scj-0236
SJAG_01805
B6JYY2
SJAG_01805
13
LLPS-Scj-0231
SJAG_01837
B6JZ15
SJAG_01837
14
LLPS-Scj-0735
SJAG_02213
B6K1V3
SJAG_02213
15
LLPS-Scj-0892
SJAG_02274
B6K209
SJAG_02274
16
LLPS-Scj-1168
SJAG_02498
B6K2N1
SJAG_02498
17
LLPS-Scj-1399
SJAG_02554
B6K0J7
SJAG_02554
18
LLPS-Scj-0721
SJAG_02796
B6K173
SJAG_02796
19
LLPS-Scj-0622
SJAG_02819
B6K196
SJAG_02819
20
LLPS-Scj-0467
SJAG_02998
B6K319
SJAG_02998
21
LLPS-Scj-0034
SJAG_03061
B6K378
SJAG_03061
22
LLPS-Scj-0114
SJAG_03157
B6K3H3
SJAG_03157
23
LLPS-Scj-1341
SJAG_03299
B6K3V7
SJAG_03299
24
LLPS-Scj-1045
SJAG_03501
B6K4E5
SJAG_03501
25
LLPS-Scj-0857
SJAG_03743
B6K2U3
SJAG_03743
26
LLPS-Scj-0071
SJAG_03959
B6K5I5
SJAG_03959
27
LLPS-Scj-0896
SJAG_04022
B6K5P6
SJAG_04022
28
LLPS-Scj-0168
SJAG_04066
B6K5U0
SJAG_04066
29
LLPS-Scj-0729
SJAG_04304
B6K6H2
SJAG_04304
30
LLPS-Scj-0029
SJAG_04640
B6K7D2
SJAG_04640
31
LLPS-Scj-0911
SJAG_04810
B6K7T9
SJAG_04810
32
LLPS-Scj-0123
SJAG_05010
B6K8D2
SJAG_05010
33
LLPS-Scj-0583
SJAG_05694
T0S0Z1
SJAG_05694