Pyrenophora triticirepentis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Pytr-1383
PTRG_03989
B2W0K4
adk1
2
LLPS-Pytr-0768
PTRG_04930
B2W5N0
LSM4
3
LLPS-Pytr-0987
PTRG_00045
B2VRI5
PTRG_00045
4
LLPS-Pytr-1535
PTRG_00316
B2VRY0
PTRG_00316
5
LLPS-Pytr-1044
PTRG_00641
B2VSD7
PTRG_00641
6
LLPS-Pytr-0109
PTRG_01212
B2VVK0
PTRG_01212
7
LLPS-Pytr-0128
PTRG_01449
B2VW87
PTRG_01449
8
LLPS-Pytr-0869
PTRG_01558
B2VWJ6
PTRG_01558
9
LLPS-Pytr-0645
PTRG_01561
B2VWJ9
PTRG_01561
10
LLPS-Pytr-0639
PTRG_02061
B2VU88
PTRG_02061
11
LLPS-Pytr-1405
PTRG_02337
B2VY47
PTRG_02337
12
LLPS-Pytr-1526
PTRG_03375
B2VXY7
PTRG_03375
13
LLPS-Pytr-0271
PTRG_03384
B2VXZ6
PTRG_03384
14
LLPS-Pytr-0847
PTRG_03390
B2VY02
PTRG_03390
15
LLPS-Pytr-0091
PTRG_03564
B2W2B6
PTRG_03564
16
LLPS-Pytr-0499
PTRG_04217
B2W182
PTRG_04217
17
LLPS-Pytr-0584
PTRG_04342
B2W1K7
PTRG_04342
18
LLPS-Pytr-0230
PTRG_04531
B2W4I1
PTRG_04531
19
LLPS-Pytr-0119
PTRG_04620
B2W4S0
PTRG_04620
20
LLPS-Pytr-1479
PTRG_05389
B2W6F1
PTRG_05389
21
LLPS-Pytr-1321
PTRG_05515
B2W6S7
PTRG_05515
22
LLPS-Pytr-0345
PTRG_05936
B2W7Z8
PTRG_05936
23
LLPS-Pytr-0167
PTRG_06306
B2W8J8
PTRG_06306
24
LLPS-Pytr-0409
PTRG_06805
B2W9Z7
PTRG_06805
25
LLPS-Pytr-0354
PTRG_06871
B2WB59
PTRG_06871
26
LLPS-Pytr-0392
PTRG_07429
B2WAW6
PTRG_07429
27
LLPS-Pytr-0798
PTRG_07725
B2WCL6
PTRG_07725
28
LLPS-Pytr-1038
PTRG_08523
B2WEF0
PTRG_08523
29
LLPS-Pytr-0864
PTRG_08965
B2WGA9
PTRG_08965
30
LLPS-Pytr-0100
PTRG_09868
B2WIQ9
PTRG_09868
31
LLPS-Pytr-0481
PTRG_09913
B2WIV4
PTRG_09913
32
LLPS-Pytr-0819
PTRG_10065
B2WJA6
PTRG_10065
33
LLPS-Pytr-0886
PTRG_10354
B2WJK8
PTRG_10354
34
LLPS-Pytr-0071
PTRG_10447
B2WKD7
PTRG_10447
35
LLPS-Pytr-0152
PTRG_10556
B2WKP6
PTRG_10556
36
LLPS-Pytr-0769
PTRG_10615
B2WKV5
PTRG_10615
37
LLPS-Pytr-0035
PTRG_11222
B2WML2
PTRG_11222