Puccinia triticina      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 28 genes.  Reviewed (0 or Unreviewed (28

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Put-0539
PTTG_06589
A0A0C4F0H2
ADK1
2
LLPS-Put-0293
PTTG_00214
A0A180GYW5
PTTG_00214
3
LLPS-Put-0302
PTTG_00256
A0A180G016
PTTG_00256
4
LLPS-Put-1329
PTTG_00298
A0A180H1J2
PTTG_00298
5
LLPS-Put-0428
PTTG_00443
A0A180H5V4
PTTG_00443
6
LLPS-Put-1109
PTTG_01343
A0A0C4EKR6
PTTG_01343
7
LLPS-Put-0751
PTTG_01432
A0A180H4N5
PTTG_01432
8
LLPS-Put-0466
PTTG_01649
A0A0C4ELL5
PTTG_01649
9
LLPS-Put-0290
PTTG_01940
A0A180GBS5
PTTG_01940
10
LLPS-Put-1082
PTTG_02247
A0A180GIF6
PTTG_02247
11
LLPS-Put-0331
PTTG_02573
A0A180GGT4
PTTG_02573
12
LLPS-Put-0305
PTTG_03432
A0A180GV81
PTTG_03432
13
LLPS-Put-0257
PTTG_03545
A0A0C4ERX5
PTTG_03545
14
LLPS-Put-0006
PTTG_04289
A0A0C4EU10
PTTG_04289
15
LLPS-Put-0210
PTTG_04330
A0A180GNB1
PTTG_04330
16
LLPS-Put-0504
PTTG_04392
A0A180GNL1
PTTG_04392
17
LLPS-Put-0303
PTTG_04539
A0A0C4EUQ8
PTTG_04539
18
LLPS-Put-0391
PTTG_05898
A0A180GYE4
PTTG_05898
19
LLPS-Put-0516
PTTG_06273
A0A0C4EZL4
PTTG_06273
20
LLPS-Put-0265
PTTG_07702
A0A180H1N3
PTTG_07702
21
LLPS-Put-0486
PTTG_08056
A0A0C4F4L6
PTTG_08056
22
LLPS-Put-0736
PTTG_08086
A0A180GVU3
PTTG_08086
23
LLPS-Put-0765
PTTG_08360
A0A180GC17
PTTG_08360
24
LLPS-Put-1330
PTTG_09114
A0A180G2R5
PTTG_09114
25
LLPS-Put-0141
PTTG_10312
A0A180G3B5
PTTG_10312
26
LLPS-Put-0422
PTTG_05333
A0A180H2S3
PTTG_25520
27
LLPS-Put-0102
PTTG_00769
A0A180GQ90
PTTG_26852
28
LLPS-Put-1255
PTTG_01640
A0A180GMJ4
PTTG_27168