Prunus persica      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Prp-0653
PRUPE_8G059700
2
LLPS-Prp-1794
PRUPE_8G259300
M5VXK7
LSM4
3
LLPS-Prp-0800
PRUPE_1G164600
M5Y9J3
PRUPE_1G164600
4
LLPS-Prp-1062
PRUPE_1G331600
M5XEF8
PRUPE_1G331600
5
LLPS-Prp-0381
PRUPE_1G443900
M5XC58
PRUPE_1G443900
6
LLPS-Prp-1051
PRUPE_1G457400
M5XCD6
PRUPE_1G457400
7
LLPS-Prp-1393
PRUPE_2G099100
M5X610
PRUPE_2G099100
8
LLPS-Prp-0023
PRUPE_2G163800
M5X7C7
PRUPE_2G163800
9
LLPS-Prp-0934
PRUPE_2G213500
A0A251QJA6
PRUPE_2G213500
10
LLPS-Prp-0001
PRUPE_2G228900
M5X1F0
PRUPE_2G228900
11
LLPS-Prp-1319
PRUPE_2G313900
M5XRZ5
PRUPE_2G313900
12
LLPS-Prp-0964
PRUPE_2G324800
M5X9G0
PRUPE_2G324800
13
LLPS-Prp-1347
PRUPE_3G037700
A0A251PV12
PRUPE_3G037700
14
LLPS-Prp-0371
PRUPE_3G168000
A0A251Q154
PRUPE_3G168000
15
LLPS-Prp-1165
PRUPE_3G269300
M5X4W5
PRUPE_3G269300
16
LLPS-Prp-0979
PRUPE_4G117400
A0A251PJ73
PRUPE_4G117400
17
LLPS-Prp-0257
PRUPE_4G137700
M5WZP0
PRUPE_4G137700
18
LLPS-Prp-0044
PRUPE_4G184700
M5WIB5
PRUPE_4G184700
19
LLPS-Prp-1204
PRUPE_5G153600
M5WN58
PRUPE_5G153600
20
LLPS-Prp-0737
PRUPE_5G165800
M5WE22
PRUPE_5G165800
21
LLPS-Prp-2455
PRUPE_5G227900
M5W9H6
PRUPE_5G227900
22
LLPS-Prp-2212
PRUPE_5G229200
A0A251PCJ6
PRUPE_5G229200
23
LLPS-Prp-0809
PRUPE_6G001600
M5W5K0
PRUPE_6G001600
24
LLPS-Prp-0954
PRUPE_6G004500
M5WH98
PRUPE_6G004500
25
LLPS-Prp-0782
PRUPE_6G050700
A0A251NKH2
PRUPE_6G050700
26
LLPS-Prp-0520
PRUPE_6G156900
M5WPB6
PRUPE_6G156900
27
LLPS-Prp-0168
PRUPE_7G067500
A0A251N7S8
PRUPE_7G067500
28
LLPS-Prp-1800
PRUPE_7G101100
M5VWW6
PRUPE_7G101100
29
LLPS-Prp-1019
PRUPE_7G143500
M5VS90
PRUPE_7G143500
30
LLPS-Prp-1840
PRUPE_7G175200
M5VSC7
PRUPE_7G175200
31
LLPS-Prp-1055
PRUPE_7G181800
M5W325
PRUPE_7G181800
32
LLPS-Prp-0368
PRUPE_7G266900
A0A251NKE5
PRUPE_7G266900
33
LLPS-Prp-0195
PRUPE_8G045900
A0A251MT37
PRUPE_8G045900
34
LLPS-Prp-1094
PRUPE_8G064800
A0A251MU56
PRUPE_8G064800
35
LLPS-Prp-0551
PRUPE_8G129400
M5VND4
PRUPE_8G129400
36
LLPS-Prp-0790
PRUPE_8G169000
A0A251N173
PRUPE_8G169000
37
LLPS-Prp-1541
PRUPE_8G218100
M5VJT4
PRUPE_8G218100