Physcomitrella patens      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 41 genes.  Reviewed (0 or Unreviewed (41

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Php-1664
Pp3c14_11180
A0A2K1JHB2
LSM4
2
LLPS-Php-0091
Pp3c1_3230
A0A2K1L6Q0
PHYPA_000130
3
LLPS-Php-1478
Pp3c1_7160
A9S013
PHYPA_000312
4
LLPS-Php-2046
Pp3c1_19220
A9S2G1
PHYPA_000836
5
LLPS-Php-0030
Pp3c1_39350
A0A2K1LBI5
PHYPA_001820
6
LLPS-Php-2515
Pp3c2_4060
A0A2K1L046
PHYPA_002182
7
LLPS-Php-0383
Pp3c2_9140
A0A2K1L0S1
PHYPA_002416
8
LLPS-Php-1785
Pp3c2_9144
A0A2K1L0T5
PHYPA_002417
9
LLPS-Php-1936
Pp3c2_16780
A0A2K1L1U4
PHYPA_002792
10
LLPS-Php-1263
Pp3c2_16830
A0A2K1L1U6
PHYPA_002796
11
LLPS-Php-1165
Pp3c3_14480
A0A2K1KUG1
PHYPA_004423
12
LLPS-Php-0217
Pp3c3_17910
A0A2K1KUY3
PHYPA_004591
13
LLPS-Php-1077
Pp3c3_36480
A0A2K1KXI0
PHYPA_005464
14
LLPS-Php-1358
Pp3c5_28430
A0A2K1KLD0
PHYPA_008256
15
LLPS-Php-0802
Pp3c7_4470
A9TD30
PHYPA_009915
16
LLPS-Php-2454
Pp3c9_1000
A0A2K1K1G8
PHYPA_012097
17
LLPS-Php-0873
Pp3c10_4970
A0A2K1JXS5
PHYPA_013446
18
LLPS-Php-0265
Pp3c10_5440
A9S636
PHYPA_013465
19
LLPS-Php-2000
Pp3c11_11060
A9SB18
PHYPA_014886
20
LLPS-Php-0153
Pp3c11_24660
A0A2K1JW55
PHYPA_015531
21
LLPS-Php-0082
Pp3c11_26710
A9TV49
PHYPA_015633
22
LLPS-Php-1878
Pp3c12_23420
A0A2K1JRW9
PHYPA_016661
23
LLPS-Php-1526
Pp3c13_15920
A9U378
PHYPA_017452
24
LLPS-Php-1207
Pp3c14_13370
A0A2K1JHR4
PHYPA_018462
25
LLPS-Php-1468
Pp3c14_14540
A0A2K1JHT7
PHYPA_018521
26
LLPS-Php-0461
Pp3c14_22470
A0A2K1JIV7
PHYPA_018886
27
LLPS-Php-0309
Pp3c15_14630
A0A2K1JD76
PHYPA_019755
28
LLPS-Php-0923
Pp3c16_12420
A0A2K1J8B3
PHYPA_020868
29
LLPS-Php-0296
Pp3c17_1620
A9T0V1
PHYPA_021545
30
LLPS-Php-0773
Pp3c17_16170
A0A2K1J449
PHYPA_022160
31
LLPS-Php-1175
Pp3c17_17420
A0A2K1J4C5
PHYPA_022227
32
LLPS-Php-0707
Pp3c19_17160
A0A2K1IYR3
PHYPA_024240
33
LLPS-Php-0809
Pp3c24_17510
A0A2K1IH61
PHYPA_029210
34
LLPS-Php-1723
Pp3c25_990
A9TEQ9
PHYPA_029428
35
LLPS-Php-0446
Pp3c26_7720
A0A2K1IC71
PHYPA_030364
36
LLPS-Php-0867
Pp3c27_1630
A0A2K1IA77
PHYPA_030757
37
LLPS-Php-1514
Pp3c27_2160
A0A2K1IAA5
PHYPA_030786
38
LLPS-Php-2173
Pp3c27_4160
A0A2K1IAM7
PHYPA_030901
39
LLPS-Php-1161
Pp3c27_5090
A0A2K1IAS1
PHYPA_030950
40
LLPS-Php-0414
Pp3s121_40
A0A2K1I9Y6
PHYPA_031142
41
LLPS-Php-1689
Pp3c2_5790
Q6V8Y3
SNF1b