Phaeosphaeria nodorum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 38 genes.  Reviewed (0 or Unreviewed (38

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Phn-0119
SNOG_01479
Q0V3D5
ADK1
2
LLPS-Phn-0381
SNOG_06190
Q0UPX4
ATG13
3
LLPS-Phn-0835
SNOG_12185
Q0U7S9
DHH1
4
LLPS-Phn-0407
SNOG_06034
Q0UQD0
LSM4
5
LLPS-Phn-0414
SNOG_14351
Q0U1G2
PAB1
6
LLPS-Phn-1018
SNOG_00063
Q0V7F1
SNOG_00063
7
LLPS-Phn-1023
SNOG_00819
Q0V595
SNOG_00819
8
LLPS-Phn-0891
SNOG_01654
Q0V2W0
SNOG_01654
9
LLPS-Phn-0667
SNOG_02311
Q0V103
SNOG_02311
10
LLPS-Phn-0226
SNOG_02397
Q0V0R7
SNOG_02397
11
LLPS-Phn-0910
SNOG_02466
Q0V0J8
SNOG_02466
12
LLPS-Phn-1264
SNOG_02685
Q0UZX9
SNOG_02685
13
LLPS-Phn-1269
SNOG_04203
Q0UVL1
SNOG_04203
14
LLPS-Phn-0912
SNOG_04682
Q0UU82
SNOG_04682
15
LLPS-Phn-1165
SNOG_04976
Q0UTD8
SNOG_04976
16
LLPS-Phn-0808
SNOG_05103
Q0UT11
SNOG_05103
17
LLPS-Phn-0209
SNOG_05264
Q0USK0
SNOG_05264
18
LLPS-Phn-1502
SNOG_05495
Q0URW9
SNOG_05495
19
LLPS-Phn-0576
SNOG_05526
Q0URT8
SNOG_05526
20
LLPS-Phn-0058
SNOG_06233
Q0UPT1
SNOG_06233
21
LLPS-Phn-0142
SNOG_08234
Q0UJ30
SNOG_08234
22
LLPS-Phn-1064
SNOG_08695
Q0UHR9
SNOG_08695
23
LLPS-Phn-0507
SNOG_09012
Q0UGV2
SNOG_09012
24
LLPS-Phn-0391
SNOG_09392
Q0UFS2
SNOG_09392
25
LLPS-Phn-0449
SNOG_09406
Q0UFQ8
SNOG_09406
26
LLPS-Phn-0648
SNOG_09707
Q0UEV7
SNOG_09707
27
LLPS-Phn-0895
SNOG_10297
Q0UD67
SNOG_10297
28
LLPS-Phn-1047
SNOG_10409
Q0UCV5
SNOG_10409
29
LLPS-Phn-0581
SNOG_10442
Q0UCS2
SNOG_10442
30
LLPS-Phn-1074
SNOG_10456
Q0UCQ8
SNOG_10456
31
LLPS-Phn-0090
SNOG_11556
Q0U9K8
SNOG_11556
32
LLPS-Phn-1190
SNOG_11634
Q0U9D0
SNOG_11634
33
LLPS-Phn-0914
SNOG_11897
Q0U8L7
SNOG_11897
34
LLPS-Phn-0460
SNOG_12018
Q0U896
SNOG_12018
35
LLPS-Phn-0120
SNOG_12197
Q0U7R7
SNOG_12197
36
LLPS-Phn-1049
SNOG_12213
Q0U7Q1
SNOG_12213
37
LLPS-Phn-0388
SNOG_12634
Q0U6I0
SNOG_12634
38
LLPS-Phn-1377
SNOG_13046
Q0U5B8
SNOG_13046