Oryza sativa      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ors-0387
Os03g0172000
Q10R44
LOC_Os03g07580
2
LLPS-Ors-0660
Os11g0176100
Q53PI0
LOC_Os11g07490
3
LLPS-Ors-0481
Os11g0579800
Q2R242
LOC_Os11g37080
4
LLPS-Ors-0863
Os11g0620100
Q2R134
LOC_Os11g40510
5
LLPS-Ors-1509
Os12g0502200
Q2QQ97
LOC_Os12g31800
6
LLPS-Ors-0688
Os03g0352400
Q10LF7
NUG2
7
LLPS-Ors-0097
Os07g0575100
Q6ZL37
OJ1562_B11.122
8
LLPS-Ors-0006
Os01g0191800
Q5SNH4
Os01g0191800
9
LLPS-Ors-1474
Os01g0256900
Q9LGE6
Os01g0256900
10
LLPS-Ors-1796
Os01g0348700
Q94CM9
Os01g0348700
11
LLPS-Ors-0918
Os01g0723500
Q8S2E6
Os01g0723500
12
LLPS-Ors-0662
Os01g0916600
Q7F2X8
Os01g0916600
13
LLPS-Ors-1113
Os02g0805900
Q6K837
Os02g0805900
14
LLPS-Ors-1204
Os02g0821800
A0A0N7KGC5
Os02g0821800
15
LLPS-Ors-1616
Os03g0858100
Q84M87
Os03g0858100
16
LLPS-Ors-1987
Os04g0270100
A0A0N7KIR1
Os04g0270100
17
LLPS-Ors-0201
Os04g0677500
Q7XKB5
Os04g0677500
18
LLPS-Ors-1624
Os05g0151000
A0A0P0WI29
Os05g0151000
19
LLPS-Ors-1151
Os09g0115400
Q6YYV1
Os09g0115400
20
LLPS-Ors-1718
Os09g0299500
A0A0N7KQI8
Os09g0299500
21
LLPS-Ors-1186
Os09g0401600
A0A0N7KQR8
Os09g0401600
22
LLPS-Ors-1478
Os09g0560900
Q653D5
Os09g0560900
23
LLPS-Ors-1360
Os10g0503700
Q109G2
Os10g0503700
24
LLPS-Ors-0513
Os11g0312220
Q08480
Os11g0312220
25
LLPS-Ors-0047
Os12g0131000
A0A0P0Y6K1
Os12g0131000
26
LLPS-Ors-1915
Os12g0165900
B9GC17
Os12g0165900
27
LLPS-Ors-0399
Os12g0568800
A0A0P0YBG5
Os12g0568800
28
LLPS-Ors-2364
Os05g0530500
Q852Q2
OSK1
29
LLPS-Ors-0303
Os07g0249600
Q7XHS7
P0021G06.113
30
LLPS-Ors-1078
Os02g0480900
Q6K2L9
P0519B12.23-1
31
LLPS-Ors-0809
Os01g0896700
Q8L4L4
RPL5B
32
LLPS-Ors-0347
Os04g0691500
B9FDR3
TRN1