Oryza meridionalis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 31 genes.  Reviewed (0 or Unreviewed (31

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orm-0007
OMERI07G18470
A0A0E0EEB7
2
LLPS-Orm-0030
OMERI11G16560
A0A0E0F7R4
3
LLPS-Orm-0042
OMERI07G16360
A0A0E0EDH5
4
LLPS-Orm-0091
OMERI02G16540
A0A0E0CKI7
5
LLPS-Orm-0121
OMERI02G15500
A0A0E0CK42
6
LLPS-Orm-0137
OMERI03G05040
A0A0E0CVV5
7
LLPS-Orm-0205
OMERI02G23180
A0A0E0CN83
8
LLPS-Orm-0225
OMERI02G25090
A0A0E0CP04
9
LLPS-Orm-0242
OMERI08G08720
A0A0E0EK57
10
LLPS-Orm-0404
OMERI05G03520
A0A0E0DM49
11
LLPS-Orm-0472
OMERI01G19370
A0A0E0C411
12
LLPS-Orm-0538
OMERI03G15730
A0A0E0D0L4
13
LLPS-Orm-0621
OMERI01G13280
A0A0E0C1K3
14
LLPS-Orm-0651
OMERI03G32510
A0A0E0D7B5
15
LLPS-Orm-0665
OMERI09G07460
A0A0E0ERZ5
16
LLPS-Orm-0689
OMERI09G14750
A0A0E0EUY5
17
LLPS-Orm-0709
OMERI01G37420
A0A0E0CBK0
18
LLPS-Orm-0713
OMERI05G21160
A0A0E0DU58
19
LLPS-Orm-0751
OMERI07G07290
A0A0E0E9M0
20
LLPS-Orm-0766
OMERI06G10910
A0A0E0DZW0
21
LLPS-Orm-0779
OMERI11G14500
A0A0E0F6Z1
22
LLPS-Orm-0860
OMERI12G09000
A0A0E0FCC2
23
LLPS-Orm-0865
OMERI12G02250
A0A0E0F9U7
24
LLPS-Orm-1071
OMERI11G09540
A0A0E0F541
25
LLPS-Orm-1168
OMERI04G25070
A0A0E0DK60
26
LLPS-Orm-1541
OMERI12G12200
A0A0E0FDN1
27
LLPS-Orm-1587
OMERI03G38340
A0A0E0D9S6
28
LLPS-Orm-1705
OMERI11G02260
A0A0E0F275
29
LLPS-Orm-1734
OMERI07G03660
A0A0E0E876
30
LLPS-Orm-1964
OMERI02G33740
A0A0E0CSJ1
31
LLPS-Orm-0325
OMERI01G09920
A0A0E0C062
LSM4