Oryza glumaepatula      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orgl-0018
OGLUM03G17930
A0A0D9Z7E5
2
LLPS-Orgl-0083
OGLUM09G20290
A0A0E0B6L6
3
LLPS-Orgl-0132
OGLUM03G37390
A0A0D9ZEI6
4
LLPS-Orgl-0190
OGLUM02G37710
A0A0D9YZV3
5
LLPS-Orgl-0300
OGLUM05G25020
A0A0E0A1Y2
6
LLPS-Orgl-0338
OGLUM01G06420
A0A0D9Y4F6
7
LLPS-Orgl-0427
OGLUM11G04540
A0A0E0BFZ4
8
LLPS-Orgl-0468
OGLUM05G04850
A0A0D9ZUT8
9
LLPS-Orgl-0517
OGLUM11G01780
A0A0E0BEY1
10
LLPS-Orgl-0543
OGLUM07G22030
A0A0E0AMN4
11
LLPS-Orgl-0573
OGLUM04G30600
A0A0D9ZSU5
12
LLPS-Orgl-0575
OGLUM07G18050
A0A0E0ALA2
13
LLPS-Orgl-0623
OGLUM07G08060
A0A0E0AHN8
14
LLPS-Orgl-0662
OGLUM11G17460
A0A0E0BKK8
15
LLPS-Orgl-0670
OGLUM03G27190
A0A0D9ZAN5
16
LLPS-Orgl-0699
OGLUM11G19610
A0A0E0BLB9
17
LLPS-Orgl-0706
OGLUM07G19410
A0A0E0ALR7
18
LLPS-Orgl-0714
OGLUM04G19610
A0A0D9ZNH3
19
LLPS-Orgl-0752
OGLUM10G12680
A0A0E0BBK2
20
LLPS-Orgl-0821
OGLUM04G05600
A0A0D9ZI93
21
LLPS-Orgl-0879
OGLUM11G10950
A0A0E0BID2
22
LLPS-Orgl-0939
OGLUM12G17650
A0A0E0BU60
23
LLPS-Orgl-0946
OGLUM05G16170
A0A0D9ZYR6
24
LLPS-Orgl-1096
OGLUM01G16560
A0A0D9Y839
25
LLPS-Orgl-1107
OGLUM05G03530
A0A0D9ZUB7
26
LLPS-Orgl-1186
OGLUM08G08390
A0A0E0ASV6
27
LLPS-Orgl-1206
OGLUM08G11100
A0A0E0ATV3
28
LLPS-Orgl-1314
OGLUM03G41510
A0A0D9ZG31
29
LLPS-Orgl-1357
OGLUM03G29980
A0A0D9ZBN4
30
LLPS-Orgl-1730
OGLUM03G05280
A0A0D9Z2Q9
31
LLPS-Orgl-2002
OGLUM01G18920
A0A0D9Y8X5
32
LLPS-Orgl-2045
OGLUM04G29600
A0A0D9ZSG9
33
LLPS-Orgl-2057
OGLUM09G09930
A0A0E0B2Q6
34
LLPS-Orgl-2090
OGLUM02G16990
A0A0D9YSB6
35
LLPS-Orgl-0171
OGLUM01G11300
A0A0D9Y695
LSM4