Oryza glaberrima      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 29 genes.  Reviewed (0 or Unreviewed (29

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Org-0120
ORGLA12G0116400
I1R6K8
2
LLPS-Org-0225
ORGLA04G0270800
I1PR89
3
LLPS-Org-0298
ORGLA07G0075000
I1Q9F8
4
LLPS-Org-0338
ORGLA11G0017900
I1QXD7
5
LLPS-Org-0460
ORGLA01G0343400
I1NU94
6
LLPS-Org-0477
ORGLA03G0051500
I1P819
7
LLPS-Org-0518
ORGLA08G0089500
I1QHJ4
8
LLPS-Org-0539
ORGLA11G0045100
I1QY59
9
LLPS-Org-0562
ORGLA11G0150400
I1R162
10
LLPS-Org-0580
ORGLA11G0094700
I1QZK5
11
LLPS-Org-0601
ORGLA07G0147400
I1QBI2
12
LLPS-Org-0658
ORGLA04G0168900
I1PNC0
13
LLPS-Org-0670
ORGLA02G0328800
I1P5N2
14
LLPS-Org-0737
ORGLA11G0164800
I1R1K6
15
LLPS-Org-0769
ORGLA03G0283100
I1PEN5
16
LLPS-Org-0799
ORGLA02G0317600
I1P5C0
17
LLPS-Org-0886
ORGLA10G0114400
I1QVB1
18
LLPS-Org-0901
ORGLA01G0055400
I1NL14
19
LLPS-Org-0923
ORGLA04G0259700
I1PQX8
20
LLPS-Org-0930
ORGLA03G0386000
I1PHL4
21
LLPS-Org-0931
ORGLA05G0131400
I1PVB6
22
LLPS-Org-1367
ORGLA12G0150600
I1R7K0
23
LLPS-Org-1375
ORGLA09G0158300
I1QRA4
24
LLPS-Org-1430
ORGLA12G0142300
I1R7B7
25
LLPS-Org-1433
ORGLA04G0042400
I1PJQ5
26
LLPS-Org-1454
ORGLA03G0166500
I1PBB9
27
LLPS-Org-1464
ORGLA03G0274500
I1PEE9
28
LLPS-Org-1466
ORGLA01G0120600
I1NMW6
29
LLPS-Org-1665
ORGLA01G0089600
I1NM06
LSM4