Oreochromis niloticus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 85 genes.  Reviewed (0 or Unreviewed (85

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orn-0098
ENSONIG00000012689.1
I3K4C8
2
LLPS-Orn-0110
ENSONIG00000002969.1
I3J4C8
3
LLPS-Orn-0177
ENSONIG00000011478.1
I3K000
4
LLPS-Orn-0293
ENSONIG00000000899.1
I3IWZ7
5
LLPS-Orn-0349
ENSONIG00000009439.1
I3JSL5
6
LLPS-Orn-0408
ENSONIG00000010169.1
I3JV94
7
LLPS-Orn-0461
ENSONIG00000007458.1
I3JKK6
8
LLPS-Orn-0595
ENSONIG00000000697.1
I3IW89
9
LLPS-Orn-0622
ENSONIG00000002932.1
I3J482
10
LLPS-Orn-0624
ENSONIG00000011165.1
I3JYW1
11
LLPS-Orn-0646
ENSONIG00000012736.1
I3K4I5
12
LLPS-Orn-0735
ENSONIG00000011372.1
I3JZL6
13
LLPS-Orn-0823
ENSONIG00000011151.1
I3JYU5
14
LLPS-Orn-0824
ENSONIG00000005194.1
I3JCD6
15
LLPS-Orn-1009
ENSONIG00000011101.1
I3JYM9
16
LLPS-Orn-1046
ENSONIG00000008416.1
I3JNY7
17
LLPS-Orn-1140
ENSONIG00000002631.1
I3J355
18
LLPS-Orn-1152
ENSONIG00000011417.1
I3JZS4
19
LLPS-Orn-1192
ENSONIG00000001860.1
I3J0D0
20
LLPS-Orn-1194
ENSONIG00000008042.1
I3JMN4
21
LLPS-Orn-1328
ENSONIG00000006076.1
I3JFL2
22
LLPS-Orn-1565
ENSONIG00000011737.1
I3K0Y3
23
LLPS-Orn-1651
ENSONIG00000015645.1
I3KEZ5
24
LLPS-Orn-1745
ENSONIG00000019484.1
I3KTT2
25
LLPS-Orn-1868
ENSONIG00000016704.1
I3KIU7
26
LLPS-Orn-1887
ENSONIG00000003412.1
I3J607
27
LLPS-Orn-2275
ENSONIG00000001586.1
I3IZE6
28
LLPS-Orn-2575
ENSONIG00000014881.1
I3KC86
29
LLPS-Orn-2581
ENSONIG00000002332.1
I3J227
30
LLPS-Orn-2646
ENSONIG00000002773.1
I3J3N8
31
LLPS-Orn-2703
ENSONIG00000004008.1
I3J862
32
LLPS-Orn-2836
ENSONIG00000017168.1
I3KKK6
33
LLPS-Orn-2894
ENSONIG00000007282.1
I3JJZ1
34
LLPS-Orn-3341
ENSONIG00000008265.1
I3JNF7
35
LLPS-Orn-3415
ENSONIG00000017914.1
I3KN85
36
LLPS-Orn-3610
ENSONIG00000009558.1
I3JT15
37
LLPS-Orn-3806
ENSONIG00000019833.1
I3KV20
38
LLPS-Orn-4124
ENSONIG00000005935.1
I3JF30
39
LLPS-Orn-2687
ENSONIG00000018212.1
I3KP92
cbx1
40
LLPS-Orn-2554
ENSONIG00000012244.1
I3K2S6
cbx5
41
LLPS-Orn-3395
ENSONIG00000013709.1
I3K805
cdk7
42
LLPS-Orn-1847
ENSONIG00000012601.1
I3K416
cdk9
43
LLPS-Orn-3790
ENSONIG00000003107.1
I3J4V3
cpeb2
44
LLPS-Orn-4103
ENSONIG00000011245.1
I3JZ55
dab2ip
45
LLPS-Orn-0227
ENSONIG00000001897.1
I3J0I3
dcp1a
46
LLPS-Orn-3998
ENSONIG00000004352.1
I3J9E4
FLNB
47
LLPS-Orn-0455
ENSONIG00000015823.1
I3KFM3
fmr1
48
LLPS-Orn-1633
ENSONIG00000001085.1
I3IXN6
gar1
49
LLPS-Orn-2587
ENSONIG00000016291.1
I3KHB4
gnl2
50
LLPS-Orn-4004
ENSONIG00000008257.1
I3JNE9
grb2
51
LLPS-Orn-2261
ENSONIG00000019754.1
I3KUS0
gspt1
52
LLPS-Orn-1347
ENSONIG00000015390.1
I3KE15
hnrnpd
53
LLPS-Orn-2027
ENSONIG00000015196.1
I3KDD2
ipo5
54
LLPS-Orn-1176
ENSONIG00000009269.1
I3JS13
kpnb1
55
LLPS-Orn-0632
ENSONIG00000008419.1
I3JNZ0
LOC100534543
56
LLPS-Orn-2361
ENSONIG00000016525.1
I3KI65
LOC100690070
57
LLPS-Orn-1234
ENSONIG00000006871.1
I3JIH5
LOC100691393
58
LLPS-Orn-1381
ENSONIG00000011487.1
I3K013
LOC100694808
59
LLPS-Orn-0055
ENSONIG00000010881.1
I3JXU6
LOC100694944
60
LLPS-Orn-0219
ENSONIG00000011418.1
I3JZS5
LOC100698984
61
LLPS-Orn-3952
ENSONIG00000001018.1
I3IXE9
LOC100707324
62
LLPS-Orn-0066
ENSONIG00000010747.1
I3JXB7
LOC100708747
63
LLPS-Orn-1975
ENSONIG00000012724.1
I3K4G9
lsm4
64
LLPS-Orn-0834
ENSONIG00000011308.1
I3JZD9
LYZ
65
LLPS-Orn-1650
ENSONIG00000018567.1
I3KQH7
map1lc3a
66
LLPS-Orn-3004
ENSONIG00000006385.1
I3JGQ6
mastl
67
LLPS-Orn-3593
ENSONIG00000005858.1
I3JET6
nck1
68
LLPS-Orn-0310
ENSONIG00000002788.1
I3J3Q6
nphs1
69
LLPS-Orn-2334
ENSONIG00000002524.1
I3J2S0
nup153
70
LLPS-Orn-1555
ENSONIG00000008710.1
I3JQ02
nup62
71
LLPS-Orn-2924
ENSONIG00000018962.1
I3KRX9
p53
72
LLPS-Orn-0606
ENSONIG00000016269.1
I3KH85
pnpla6
73
LLPS-Orn-2133
ENSONIG00000009231.1
I3JRW6
polr2a
74
LLPS-Orn-1517
ENSONIG00000002797.1
I3J3R7
prkaa2
75
LLPS-Orn-0716
ENSONIG00000007808.1
I3JLU0
prmt1
76
LLPS-Orn-3101
ENSONIG00000012010.1
I3K1X3
pspc1
77
LLPS-Orn-1374
ENSONIG00000004876.1
I3JB93
rpl23a
78
LLPS-Orn-1935
ENSONIG00000019243.1
I3KSX1
RPL5 (1 of many)
79
LLPS-Orn-1101
ENSONIG00000002417.1
I3J2D2
sgo1
80
LLPS-Orn-3428
ENSONIG00000000103.1
I3IU35
sqstm1
81
LLPS-Orn-0416
ENSONIG00000015897.1
I3KFX9
tia1
82
LLPS-Orn-1619
ENSONIG00000010290.1
I3JVP6
tial1
83
LLPS-Orn-1753
ENSONIG00000016618.1
I3KII6
TUBA1A
84
LLPS-Orn-2798
ENSONIG00000002579.1
I3J2Z1
ubxn6
85
LLPS-Orn-3012
ENSONIG00000002200.1
I3J1K1
ZNF207 (1 of many)