Manihot esculenta      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 38 genes.  Reviewed (0 or Unreviewed (38

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Mae-0753
MANES_05G063400
A0A2C9VW93
LSM4
2
LLPS-Mae-0894
MANES_01G017000
A0A2C9WJF0
MANES_01G017000
3
LLPS-Mae-0157
MANES_01G151000
A0A251M2B5
MANES_01G151000
4
LLPS-Mae-1059
MANES_01G155200
A0A2C9WKZ6
MANES_01G155200
5
LLPS-Mae-2498
MANES_02G049300
A0A2C9WAX4
MANES_02G049300
6
LLPS-Mae-1342
MANES_03G031500
A0A2C9W6L6
MANES_03G031500
7
LLPS-Mae-1164
MANES_03G075400
A0A2C9W7K1
MANES_03G075400
8
LLPS-Mae-1295
MANES_03G112600
A0A2C9W6F8
MANES_03G112600
9
LLPS-Mae-0470
MANES_03G144500
A0A2C9W7E9
MANES_03G144500
10
LLPS-Mae-1380
MANES_04G104700
A0A2C9W1B9
MANES_04G104700
11
LLPS-Mae-0059
MANES_04G142700
A0A2C9W2D8
MANES_04G142700
12
LLPS-Mae-0337
MANES_05G037200
A0A2C9VT15
MANES_05G037200
13
LLPS-Mae-2256
MANES_05G143000
A0A2C9VW54
MANES_05G143000
14
LLPS-Mae-0795
MANES_06G009200
A0A2C9VLP0
MANES_06G009200
15
LLPS-Mae-0476
MANES_06G023400
A0A2C9VM73
MANES_06G023400
16
LLPS-Mae-2383
MANES_06G174000
A0A251KRJ6
MANES_06G174000
17
LLPS-Mae-1818
MANES_07G056600
A0A251JZB7
MANES_07G056600
18
LLPS-Mae-1489
MANES_07G100300
A0A2C9VLN6
MANES_07G100300
19
LLPS-Mae-0356
MANES_07G111000
A0A251KIT5
MANES_07G111000
20
LLPS-Mae-0364
MANES_08G095300
A0A2C9VGT3
MANES_08G095300
21
LLPS-Mae-0440
MANES_08G144000
A0A2C9VHW2
MANES_08G144000
22
LLPS-Mae-0884
MANES_08G163100
A0A2C9VJ81
MANES_08G163100
23
LLPS-Mae-2325
MANES_09G051800
A0A2C9V812
MANES_09G051800
24
LLPS-Mae-1805
MANES_11G016600
A0A2C9UX41
MANES_11G016600
25
LLPS-Mae-1823
MANES_13G016600
A0A2C9UN06
MANES_13G016600
26
LLPS-Mae-0690
MANES_13G120600
A0A2C9US98
MANES_13G120600
27
LLPS-Mae-0321
MANES_14G023700
A0A2C9UJ35
MANES_14G023700
28
LLPS-Mae-1337
MANES_14G168200
A0A2C9UMI7
MANES_14G168200
29
LLPS-Mae-0515
MANES_15G106400
A0A251J4V2
MANES_15G106400
30
LLPS-Mae-1734
MANES_15G108300
A0A2C9UGS7
MANES_15G108300
31
LLPS-Mae-0036
MANES_15G133200
A0A2C9UFU0
MANES_15G133200
32
LLPS-Mae-0295
MANES_15G145000
A0A2C9UG38
MANES_15G145000
33
LLPS-Mae-0812
MANES_15G163200
A0A2C9UGS2
MANES_15G163200
34
LLPS-Mae-2279
MANES_16G035000
A0A251IY90
MANES_16G035000
35
LLPS-Mae-0322
MANES_16G076400
A0A2C9U9X1
MANES_16G076400
36
LLPS-Mae-1326
MANES_16G093200
A0A2C9U9Y7
MANES_16G093200
37
LLPS-Mae-0678
MANES_18G093400
A0A2C9U1T2
MANES_18G093400
38
LLPS-Mae-0412
MANES_18G146300
A0A251ISY3
MANES_18G146300