Gasterosteus aculeatus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 78 genes.  Reviewed (0 or Unreviewed (78

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Gaa-0010
ENSGACG00000017326.1
G3PZ46
2
LLPS-Gaa-0068
ENSGACG00000013692.1
G3PKH6
3
LLPS-Gaa-0103
ENSGACG00000000496.1
G3N5R5
4
LLPS-Gaa-0111
ENSGACG00000001942.1
G3NB37
5
LLPS-Gaa-0140
ENSGACG00000003572.1
G3NH89
6
LLPS-Gaa-0207
ENSGACG00000004477.1
G3NKU2
7
LLPS-Gaa-0225
ENSGACG00000015800.1
G3PTB1
8
LLPS-Gaa-0240
ENSGACG00000002743.1
G3NE79
9
LLPS-Gaa-0280
ENSGACG00000020625.1
G3QBL6
10
LLPS-Gaa-0336
ENSGACG00000011626.1
G3PCP7
11
LLPS-Gaa-0354
ENSGACG00000020694.1
G3QBU8
12
LLPS-Gaa-0396
ENSGACG00000020319.1
G3QAD1
13
LLPS-Gaa-0438
ENSGACG00000007446.1
G3NX14
14
LLPS-Gaa-0439
ENSGACG00000006295.2
G3NSL2
15
LLPS-Gaa-0477
ENSGACG00000013966.1
G3PLG2
16
LLPS-Gaa-0484
ENSGACG00000003365.1
G3NGF8
17
LLPS-Gaa-0495
ENSGACG00000012546.1
G3PG59
18
LLPS-Gaa-0506
ENSGACG00000004194.1
G3NJV1
19
LLPS-Gaa-0510
ENSGACG00000018562.1
G3Q3U0
20
LLPS-Gaa-0595
ENSGACG00000002413.1
G3NCV2
21
LLPS-Gaa-0601
ENSGACG00000010440.1
G3P875
22
LLPS-Gaa-0609
ENSGACG00000008259.1
G3P044
23
LLPS-Gaa-0734
ENSGACG00000015989.1
G3PU12
24
LLPS-Gaa-0738
ENSGACG00000006925.1
G3NVA0
25
LLPS-Gaa-0769
ENSGACG00000005564.1
G3NPV4
26
LLPS-Gaa-0784
ENSGACG00000015323.2
G3PRH4
27
LLPS-Gaa-0915
ENSGACG00000015841.2
G3PTH2
28
LLPS-Gaa-0996
ENSGACG00000014431.1
G3PN62
29
LLPS-Gaa-1025
ENSGACG00000010879.1
G3P9Y2
30
LLPS-Gaa-1086
ENSGACG00000014804.1
G3PPL6
31
LLPS-Gaa-1124
ENSGACG00000007421.1
G3NWX4
32
LLPS-Gaa-1202
ENSGACG00000012458.1
G3PFV8
33
LLPS-Gaa-1300
ENSGACG00000006354.1
G3NSV6
34
LLPS-Gaa-1308
ENSGACG00000018821.3
G3Q4T1
35
LLPS-Gaa-1387
ENSGACG00000009848.1
G3P5Z1
36
LLPS-Gaa-1482
ENSGACG00000018517.1
G3Q3M8
37
LLPS-Gaa-1551
ENSGACG00000016271.1
G3PV31
38
LLPS-Gaa-1583
ENSGACG00000011048.1
G3PAI7
39
LLPS-Gaa-1625
ENSGACG00000013133.1
G3PIE5
40
LLPS-Gaa-1764
ENSGACG00000004897.1
G3NMC7
41
LLPS-Gaa-1840
ENSGACG00000007124.1
G3NVV6
42
LLPS-Gaa-1886
ENSGACG00000015669.1
G3PSU2
43
LLPS-Gaa-2073
ENSGACG00000011587.1
G3PCK5
44
LLPS-Gaa-2084
ENSGACG00000001844.1
G3NAQ4
45
LLPS-Gaa-2097
ENSGACG00000001174.1
G3N889
46
LLPS-Gaa-2110
ENSGACG00000019406.1
G3Q6Z0
47
LLPS-Gaa-2152
ENSGACG00000000059.1
G3N459
48
LLPS-Gaa-2206
ENSGACG00000004093.1
G3NJ66
49
LLPS-Gaa-2292
ENSGACG00000014410.1
G3PN21
50
LLPS-Gaa-2326
ENSGACG00000005995.1
G3NRG8
51
LLPS-Gaa-2349
ENSGACG00000007711.1
G3NY17
52
LLPS-Gaa-2363
ENSGACG00000003608.1
G3NHC0
53
LLPS-Gaa-2381
ENSGACG00000006393.1
G3NTC2
54
LLPS-Gaa-2469
ENSGACG00000015916.2
G3PTR8
55
LLPS-Gaa-2658
ENSGACG00000009783.1
G3P5P6
56
LLPS-Gaa-2721
ENSGACG00000012164.1
G3PET4
57
LLPS-Gaa-2864
ENSGACG00000000010.1
G3N3Z7
58
LLPS-Gaa-2865
ENSGACG00000004607.1
G3NL77
59
LLPS-Gaa-2942
ENSGACG00000014901.1
G3PPY3
60
LLPS-Gaa-2973
ENSGACG00000018742.1
G3Q4I1
61
LLPS-Gaa-3004
ENSGACG00000011288.1
G3PBG4
62
LLPS-Gaa-3078
ENSGACG00000016359.1
G3PVF9
63
LLPS-Gaa-3259
ENSGACG00000006896.1
G3NUY1
64
LLPS-Gaa-3547
ENSGACG00000005389.1
G3NP66
65
LLPS-Gaa-3597
ENSGACG00000014978.1
G3PQ71
66
LLPS-Gaa-3772
ENSGACG00000020014.1
G3Q979
67
LLPS-Gaa-3845
ENSGACG00000003157.1
G3NFR5
68
LLPS-Gaa-3887
ENSGACG00000003847.1
G3NI95
69
LLPS-Gaa-3898
ENSGACG00000004490.1
G3NKR5
70
LLPS-Gaa-3948
ENSGACG00000018681.1
G3Q490
71
LLPS-Gaa-4018
ENSGACG00000010180.1
G3P7C5
72
LLPS-Gaa-0337
ENSGACG00000006796.1
G3NUP3
AGO2
73
LLPS-Gaa-0312
ENSGACG00000002010.1
G3NBD5
AK2
74
LLPS-Gaa-0886
ENSGACG00000008140.1
G3NZM5
LSM4
75
LLPS-Gaa-3546
ENSGACG00000018290.1
G3Q2S7
LYZ
76
LLPS-Gaa-0916
ENSGACG00000004883.1
G3NM85
NUP62
77
LLPS-Gaa-2102
ENSGACG00000004230.1
G3NJR1
RPL5 (1 of many)
78
LLPS-Gaa-3838
ENSGACG00000004980.1
G3NML8
SGO1