Gaeumannomyces graminis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 34 genes.  Reviewed (0 or Unreviewed (34

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Gag-1166
GGTG_00430
J3NGP1
20340888
2
LLPS-Gag-0588
GGTG_00548
J3NH13
20341006
3
LLPS-Gag-0912
GGTG_00701
J3NHG4
20341159
4
LLPS-Gag-0227
GGTG_01201
J3NIW7
20341659
5
LLPS-Gag-0392
GGTG_01213
J3NIX9
20341671
6
LLPS-Gag-0027
GGTG_01398
J3NJG6
20341856
7
LLPS-Gag-0455
GGTG_01587
J3NK05
20342045
8
LLPS-Gag-0923
GGTG_01635
J3NK53
20342093
9
LLPS-Gag-0810
GGTG_01718
J3NKD9
20342176
10
LLPS-Gag-0387
GGTG_02735
J3NN77
20343193
11
LLPS-Gag-0910
GGTG_03151
J3NPE3
20343609
12
LLPS-Gag-0987
GGTG_03418
J3NQ61
20343876
13
LLPS-Gag-1143
GGTG_04334
J3NST5
20344792
14
LLPS-Gag-0221
GGTG_05189
J3NV76
20345647
15
LLPS-Gag-0485
GGTG_05210
J3NV97
20345668
16
LLPS-Gag-0148
GGTG_05951
J3NXE5
20346409
17
LLPS-Gag-1499
GGTG_06054
J3NXP9
20346512
18
LLPS-Gag-0658
GGTG_06167
J3NY12
20346625
19
LLPS-Gag-1310
GGTG_06548
J3NZ48
20347006
20
LLPS-Gag-0342
GGTG_06797
J3NZV0
20347255
21
LLPS-Gag-0184
GGTG_07081
J3P0N6
20347539
22
LLPS-Gag-0271
GGTG_08213
J3P3X8
20348671
23
LLPS-Gag-0107
GGTG_08219
J3P3Y4
20348677
24
LLPS-Gag-0200
GGTG_08266
J3P429
20348724
25
LLPS-Gag-0202
GGTG_08456
J3P4L9
20348914
26
LLPS-Gag-1274
GGTG_10419
J3PA93
20350877
27
LLPS-Gag-0728
GGTG_10491
J3PAG5
20350949
28
LLPS-Gag-0166
GGTG_10504
J3PAH8
20350962
29
LLPS-Gag-0858
GGTG_11754
J3PE31
20352212
30
LLPS-Gag-0470
GGTG_12191
J3PFB4
20352649
31
LLPS-Gag-1405
GGTG_12865
J3PH85
20353323
32
LLPS-Gag-0429
GGTG_12868
J3PH88
20353326
33
LLPS-Gag-1148
GGTG_13934
J3PK85
20354392
34
LLPS-Gag-1300
GGTG_14279
J3PL35
20354737