Fusarium verticillioides      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 34 genes.  Reviewed (0 or Unreviewed (34

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Fuv-1253
FVEG_02157
2
LLPS-Fuv-0733
FVEG_11398
W7MMQ5
ADK1
3
LLPS-Fuv-1353
FVEG_00553
W7LVL0
FVEG_00553
4
LLPS-Fuv-1057
FVEG_00683
W7LMW4
FVEG_00683
5
LLPS-Fuv-0505
FVEG_00825
W7LNL2
FVEG_00825
6
LLPS-Fuv-0838
FVEG_00902
W7LX87
FVEG_00902
7
LLPS-Fuv-0639
FVEG_01441
W7LRI5
FVEG_01441
8
LLPS-Fuv-0450
FVEG_02089
W7LI96
FVEG_02089
9
LLPS-Fuv-0924
FVEG_02291
W7LVP8
FVEG_02291
10
LLPS-Fuv-1304
FVEG_02387
W7LVW3
FVEG_02387
11
LLPS-Fuv-0877
FVEG_02731
W7LXQ2
FVEG_02731
12
LLPS-Fuv-0835
FVEG_02783
W7M5Z0
FVEG_02783
13
LLPS-Fuv-1475
FVEG_03610
W7M1S7
FVEG_03610
14
LLPS-Fuv-0545
FVEG_04005
W7M3E5
FVEG_04005
15
LLPS-Fuv-0152
FVEG_05048
W7M7U9
FVEG_05048
16
LLPS-Fuv-0501
FVEG_05069
W7M7Z6
FVEG_05069
17
LLPS-Fuv-1330
FVEG_05141
W7M8E9
FVEG_05141
18
LLPS-Fuv-0225
FVEG_05520
W7MA90
FVEG_05520
19
LLPS-Fuv-0685
FVEG_06272
W7M3E9
FVEG_06272
20
LLPS-Fuv-0155
FVEG_07122
W7M5E8
FVEG_07122
21
LLPS-Fuv-0100
FVEG_07385
W7MRH3
FVEG_07385
22
LLPS-Fuv-0140
FVEG_07402
W7MI44
FVEG_07402
23
LLPS-Fuv-0493
FVEG_07552
W7MIM1
FVEG_07552
24
LLPS-Fuv-0131
FVEG_08233
W7ML38
FVEG_08233
25
LLPS-Fuv-1320
FVEG_08705
W7MNE0
FVEG_08705
26
LLPS-Fuv-0748
FVEG_09171
W7MZB7
FVEG_09171
27
LLPS-Fuv-0405
FVEG_11461
W7MYC5
FVEG_11461
28
LLPS-Fuv-0807
FVEG_11565
W7MNM8
FVEG_11565
29
LLPS-Fuv-0489
FVEG_11574
W7MNN7
FVEG_11574
30
LLPS-Fuv-0458
FVEG_12139
W7MQN3
FVEG_12139
31
LLPS-Fuv-0200
FVEG_12776
W7N4M7
FVEG_12776
32
LLPS-Fuv-0132
FVEG_02158
W7LL61
FVEG_14988
33
LLPS-Fuv-0318
FVEG_07111
W7MQ84
FVEG_16019
34
LLPS-Fuv-0305
FVEG_04240
W7LV55
LSM4