Fusarium oxysporum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Fuo-0211
FOXG_05347
A0A0D2XN18
2
LLPS-Fuo-0234
FOXG_03726
A0A0D2XIH2
3
LLPS-Fuo-0563
FOXG_05398
A0A0D2XN69
4
LLPS-Fuo-0654
FOXG_03287
A0A0D2XH89
5
LLPS-Fuo-0793
FOXG_00074
A0A0D2X866
6
LLPS-Fuo-0914
FOXG_01483
A0A0D2XC60
7
LLPS-Fuo-1048
FOXG_05047
A0A0D2XM72
8
LLPS-Fuo-1220
FOXG_03288
A0A0D2XH90
9
LLPS-Fuo-1051
FOXG_12661
A0A0D2Y8P5
ADK1
10
LLPS-Fuo-0227
FOXG_00610
A0A0D2X9P5
FOXG_00610
11
LLPS-Fuo-0134
FOXG_00686
A0A0D2X9X1
FOXG_00686
12
LLPS-Fuo-1306
FOXG_00960
A0A0D2XAP4
FOXG_00960
13
LLPS-Fuo-0901
FOXG_01856
A0A0D2XD81
FOXG_01856
14
LLPS-Fuo-0560
FOXG_01981
A0A0D2XDK1
FOXG_01981
15
LLPS-Fuo-0301
FOXG_02348
A0A0D2XEL3
FOXG_02348
16
LLPS-Fuo-0124
FOXG_03218
A0A0D2XH20
FOXG_03218
17
LLPS-Fuo-1258
FOXG_03419
A0A0D2XHM1
FOXG_03419
18
LLPS-Fuo-0115
FOXG_03521
A0A0D2XHX2
FOXG_03521
19
LLPS-Fuo-0132
FOXG_04281
A0A0D2XK12
FOXG_04281
20
LLPS-Fuo-0256
FOXG_04434
A0A0D2XKG0
FOXG_04434
21
LLPS-Fuo-1063
FOXG_05735
A0A0D2XP49
FOXG_05735
22
LLPS-Fuo-0467
FOXG_06148
A0A0D2XQA6
FOXG_06148
23
LLPS-Fuo-0698
FOXG_08125
A0A0D2XVW3
FOXG_08125
24
LLPS-Fuo-1284
FOXG_08146
A0A0C4DHU4
FOXG_08146
25
LLPS-Fuo-0577
FOXG_08406
A0A0D2XWP0
FOXG_08406
26
LLPS-Fuo-0644
FOXG_09482
A0A0D2XZQ1
FOXG_09482
27
LLPS-Fuo-0103
FOXG_09494
A0A0D2XZR2
FOXG_09494
28
LLPS-Fuo-1143
FOXG_09777
A0A0D2Y0I9
FOXG_09777
29
LLPS-Fuo-0402
FOXG_10522
A0A0D2Y2M4
FOXG_10522
30
LLPS-Fuo-0311
FOXG_12722
A0A0D2Y8V4
FOXG_12722
31
LLPS-Fuo-0487
FOXG_12830
A0A0D2Y960
FOXG_12830
32
LLPS-Fuo-0350
FOXG_15445
A0A0D2YGK4
FOXG_15445
33
LLPS-Fuo-0061
FOXG_06390
A0A0D2XQY9
LSM4